Property:Additional comments model

From CSDMS

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A manual is being prepared. Please contact us for some assistance in getting started.  +
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A manuscript titled "Streamwise and vertical dispersal of tracer stones in an equilibrium bed" will be submitted soon to Water Resources Research.  +
About this component: *The TopoFlow hydrologic model was originally written in IDL and had a complete point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has a "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *Each of the hydrologic process components used by TopoFlow can now be used either as components in a larger model (such as TopoFlow) or as stand-alone "submodels". *TopoFlow has a 90+ page HTML help system and intuitive GUI that is ideal for teaching. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_topoflow.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py". *This version was converted from IDL to Python with the help of i2py 2.0.  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
About this component: *This component was developed as part of the TopoFlow hydrologic model, which was originally written in IDL and had a point-and-click GUI. For more information on TopoFlow, please goto: https://csdms.colorado.edu/wiki/Model:TopoFlow. *When used from within the CSDMS Modeling Tool (CMT), this component has "config" button which launches a graphical user interface (GUI) for changing input parameters. The GUI is a tabbed dialog with a Help button at the bottom that displays HTML help in a browser window. *This component also has a configuration (CFG) file, with a name of the form: <case_prefix>_channels_diff_wave.cfg. This file can be edited with a text editor. *The Numerical Python module (numpy) is used for fast, array-based processing. *This model has an OpenMI-style interface, similar to OpenMI 2.0. Part of this interface is inherited from "CSDMS_base.py".  +
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Active development and maintenance of the code has moved to GitHub and been incorporated within broader LSDTopoTools software package: https://github.com/LSDtopotools/LSDTopoTools2  +
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All links to documentation of WOFOST are available on the WOFOST page on the WageningenUR web site given above.  +
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All the model information can be found in: https://sites.google.com/view/olaflowcfd/home  +
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Associated paper: Salles et al., (2020). gospl: Global Scalable Paleo Landscape Evolution. Journal of Open Source Software, 5(56), 2804, https://doi.org/10.21105/joss.02804  +
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Barely started; using this as a testbed for the new CSDMS BMI interface.  +
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Barnhart, K. R., Glade, R. C., Shobe, C. M., and Tucker, G. E.: Terrainbento 1.0: a Python package for multi-model analysis in long-term drainage basin evolution, Geosci. Model Dev., 12, 1267-1297, https://doi.org/10.5194/gmd-12-1267-2019, 2019.  +
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Both codes are undergoing extensive revisions needed to incorporate them into the framework of the NearCoM Nearshore Community Model.  +
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Code is research grade.  +
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Current version is 5.0  +
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Disclaimer Although every effort is made to provide timely and accurate information, the authors, the U.S. Geological Survey (USGS), and the U.S. Government make no warranty, expressed or implied, as to the timeliness or accuracy of the contents of this web site, which may be updated and revised at any time. Any use of trade, product, or firm names in this publication is for descriptive purposes only and does not imply endorsement by the U.S. Government. Any links to non-Government web sites are provided for convenience only and do not imply endorsement by the U.S. Government.  +
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Email to Chris.jenkins@colorado.edu for further details, manual, code, collaboration  +
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FVCOM is an open source code ocean community model that always welcomes new users. This program is only permitted for use in non-commercial academic research and education. Users are required to register in orde to receive the source codes, demo examples, and user manuals as well as some recommended postprocessing tools.  +
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For details on the methodology and underlying benchmarking philosophy, see the following paper: Nathan Collier, Forrest M. Hoffman, David M. Lawrence, Gretchen Keppel‐Aleks, Charles D. Koven, William J. Riley, Mingquan Mu, and James T. Randerson, "The International Land Model Benchmarking (ILAMB) System: Design, Theory, and Implementation", JAMES, 10 (11), 2018, https://doi.org/10.1029/2018MS001354  +
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Form filled out by Albert Kettner from information available on the web.  +
Form was filled out by Albert Kettner, based on information available on the web  +
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GOLEM was written in the 1990s by one of the creators of CHILD. Although it lacks many of the special capabilities of CHILD, it has a simpler, more compact code base (just a single C source file) and uses a raster grid data structure.  +
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I currently have an NSF-CMG grant to work with Greg Tucker, Tom Manteuffel and Steve McCormick to find faster algorithms for this type of model.  +
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Information provided by Bert Jagers  +
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Laura Moore updated this questionaire and uploaded sample simulations and a user's guide on 10/29/2012.  +
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Limitations of FACET. The accuracy of FACET output depends on the quality and resolution of the DEM used. The user should not interpret FACET stream and floodplain geomorphic measurements as a replacement for on-the-ground measurements of geomorphic characteristic. Rather, FACET provides a tool to rapidly assess patterns in geomorphic characteristics at a regional scale. Any FACET output should be screened for outliers and abnormalities.  +
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Linkages Supported: Links to GLUE (Generalized Likelihood Uncertainty Estimation) program for sensitivity/uncertainty/calibration analyses.  +
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Manual/videos/walkthroughs available through the wiki on the sourceforge site above.  +
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Mariotti, G., AC Spivak, SY Luk, G Ceccherini, M Tyrrell, ME Gonneea, (2020), Modeling the spatial dynamics of marsh ponds in New England salt marshes, Geomorphology, 107262 https://www.sciencedirect.com/science/article/abs/pii/S0169555X20302348  +
Mariotti, G., W.S. Kearney, S. Fagherazzi, (2016), Soil creep in salt marshes, Geology, 44 (6), 459-462.  +
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Method is also available as part of the Freeware SedLog package - see http://www.sedlog.com/  +
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Model described in: G. Mariotti, and J. Carr, (2014), Dual role of salt marsh retreat: Long-term loss and short-term resilience, WRR, DOI: 10.1002/2013WR014676. The source code reproduce figure 2 of this paper.  +
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Model description and calibration can be found in: Leonardi, N., and S. Fagherazzi (2014), How waves shape salt marshes, Geology , doi:10.1130/G35751.1. Leonardi, N., and S. Fagherazzi (2015), Local variability in erosional resistance affects large scale morphodynamic response of salt marshes to wind waves, Geophysical Research Letters, 2015GL064730, doi:10.1002/2015GL064730.  +
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Model questionnaire filled out based on website, by Albert Kettner  +
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Model requires the use of the FFTW discrete Fourier transform subroutine library. Users should independently download this library, which is available at: http://www.fftw.org  +
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Model was initially developed to interpolate between analogue experiments and landscape evolution done at the Utrecht University by George Postma and coworkers.  +
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More will be filled out soon (10/18/2010)  +
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Most recent model available from ah6p@virginia.edu.  +
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NOTICE: REGISTRATION IS NEEDED TO RECEIVE THE SOURCE CODE: http://adcirc.org/  +
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NOTICE: REGISTRATION IS NEEDED TO RECEIVE THE SOURCE CODE: http://chinacat.coastal.udel.edu/programs/funwave/funwave.html  +
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NOTICE: REGISTRATION IS NEEDED TO RECEIVE THE SOURCE CODE: http://www.hydro.washington.edu/Lettenmaier/Models/DHSVM/index.shtml  +
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NOTICE: REGISTRATION IS NEEDED TO RECEIVE THE SOURCE CODE, SEND THE OWNER A LETTER THAT YOU ARE INTERESTED IN THE SOURCE CODE: http://www.cesm.ucar.edu/models/ccsm4.0/  +
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NOTICE: code is free available through CCSM UCAR website: http://www.ccsm.ucar.edu/models/atm-cam/ No need to register  +
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None  +
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Notice: Code is freely available through the following site: http://mitgcm.org/ No need to register  +
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Notice: SWAN can be freely downloaded from the next site: https://sourceforge.net/projects/swanmodel/files/swan/ No registration is needed.  +
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Particulates model is regression-based, while dissolved model is more conceptual-mechanistic. Conceptual framework and data sets in development since 2002. Integrated modeling code framework (GNE) developed in 2007; currently tested on Windows only, but can be easily adapted to other platforms.  +
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Please send any questions or comments to mark.piper@colorado.edu or csdmssupport@colorado.edu.  +
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Questionnaire is filled out by Albert Kettner  +
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Questions which arise about the module, the model it implements, and the associated theory, may be addressed by the preprint available at https://arxiv.org/abs/1801.02810.  +
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RCPWAVE is distributed as a component of the Coastal Engineering Design and Analysis System (CEDAS). http://chl.erdc.usace.army.mil/cedas  +
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Requirements To run these codes, you will need the following software: • Python 2.7 or earlier (not compatible with Python 3) The following Python packages are also required: • matplotlib • scipy • numpy • cPickle • osgeo • fiona • shapely • utilities • sklearn • seaborn • clusterpy • itertools • pandas • pysal • collections What input is required? To run this code, the following shape files are required: • network shapefile, containing the river network extracted from satellite imagery • island shapefile, containing the land masses or islands of the delta • patch shapefile, containing the outline of channels What does the code do? The file all.ipynb contains codes run the analysis. From start to finish, the Jupyter Notebook contains code blocks that: • loads in the shapefiles • calculate the parameters for the network that both surround and drain the islands • calculate the base metrics (e.g. perimeter, area, solidity, aspect ratio...) • calculates maximum distance from the island center to the nearest water body • estimates minimum, average and maximum widths of all network channels • evaluates the fractal dimension of each delta island • creates shapefiles based on the metrics calculated earlier in the code • saves all metrics to an output file • generates PCA and GeoSOM results from the island and channel metrics • plots the U-matrix and dendrogram based on the GeoSOM results  +
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Run this model via MATLAB  +
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SBEACH is distributed as a component of the Coastal Engineering Design and Analysis System (CEDAS).  +