Ecopath with Ecosim-Publications

From CSDMS
References Ecopath with Ecosim

Total peer and non-peer reviewed publications

525

Journal Articles

483

Books

1

Book sections

21

Reports

6

Thesis

8

Abstracts

5

Code

0

Blogs

0

Miscellaneous

0

Web

0

Preprints

0

References are automatically added
Our search algorithms may occasionally miss or include incorrect references. If you find one, please add it using the buttons below or notify csdmsweb@colorado.edu

Add references



Peer reviewed reference(s) Year type Cited
Peer reviewed reference(s) Year type Cited
Li, Hongxiang; Jin, Lei; Si, Yujie; Mu, Jiandong; Liu, Zhaoning; Liu, Cunqi; Zhang, Yajuan; 2024. Lake Restoration Improved Ecosystem Maturity Through Regime Shifts—A Case Study of Lake Baiyangdian, China. Sustainability, 169372. 10.3390/su16219372 2024 Model application 0
Wanjari, Rinkesh Nemichand; Shah, Tasaduq Hussain; Telvekar, Prashant; Bhat, Farooz Ahmad; Abubakr, Adnan; Bhat, Bilal Ahmad; Darve, Sabina Iqbal; Ramteke, Karankumar Kishorkumar; Mathialagan, Dhanalakshmi; Magloo, Aadil Hussain; Singh, Bidyasagar Sanjenbam; 2024. Assessing ecosystem health: A preliminary investigation of the gosikhurd dam ecosystem structure and functioning, an appraisal based on ecological modelling, India. Environmental Monitoring and Assessment, 196. 10.1007/s10661-024-12958-8 2024 Model application 0
Sora, Kristen J; Wabnitz, Colette C C; Steiner, Nadja S; Sumaila, U Rashid; Hoover, Carie; Niemi, Andrea; Loseto, Lisa L; Li, Mi-Ling; Giang, Amanda; Gillies, Emma; Cheung, William W L; Byron, Carrie; 2024. Historical climate drivers and species’ ecological niche in the Beaufort Sea food web. ICES Journal of Marine Science, . 10.1093/icesjms/fsae062 2024 Model application 1
Dişa, Deniz; Akoglu, Ekin; Salihoglu, Baris; 2024. Exploitation of mesopelagic fish stocks can impair the biological pump and food web dynamics in the ocean. Frontiers in Marine Science, 11. 10.3389/fmars.2024.1389941 2024 Model application 0
Couture, Fanny; Christensen, Villy; Walters, Carl; Belgrano, Andrea; 2024. The combined effects of predation, fishing, and ocean productivity on salmon species targeted by marine mammals in the northeast Pacific. PLOS ONE, 19e0296358. 10.1371/journal.pone.0296358 2024 Model application 1
Zhang, Yuanyuan; Gu, Kaidi; Wang, Xinyu; Zhang, Ji’ao; Duan, Jiaoyang; Hu, Zhongjun; Liu, Qigen; 2024. Food Web Structure and Ecosystem Functions of the Water Source in the Middle Route of China’s South-to-North Water Diversion Project. Fishes, 9202. 10.3390/fishes9060202 2024 Model application 0
McMullen, Karly; Vargas, Félix Hernán; Calle, Paola; Alavarado-Cadena, Omar; Pakhomov, Evgeny A.; Alava, Juan José; Sundaramanickam, Arumugam; 2024. Modelling microplastic bioaccumulation and biomagnification potential in the Galápagos penguin ecosystem using Ecopath and Ecosim (EwE) with Ecotracer. PLOS ONE, 19e0296788. 10.1371/journal.pone.0296788 2024 Model application 3
Gillies, Emma J.; Li, Mi-Ling; Christensen, Villy; Hoover, Carie; Sora, Kristen J.; Loseto, Lisa L.; Cheung, William W. L.; Angot, Hélène; Giang, Amanda; 2024. Exploring Drivers of Historic Mercury Trends in Beluga Whales Using an Ecosystem Modeling Approach. ACS Environmental Au, 4219–235. 10.1021/acsenvironau.3c00072 2024 Model application 0
Bentley, Jacob W; Chagaris, David; Coll, Marta; Heymans, Johanna J; Serpetti, Natalia; Walters, Carl J; Christensen, Villy; Hunsicker, Mary; 2024. Calibrating ecosystem models to support ecosystem-based management of marine systems. ICES Journal of Marine Science, 81260–275. 10.1093/icesjms/fsad213 2024 Model application 0
Hsiao, Po-Yuan; Lan, Kuo-Wei; Lee, Wen-Hao; Liang, Ting-Yu; Liao, Cheng-Hsin; Su, Nan-Jay; 2024. Impacts of El Niño–Southern Oscillation (ENSO) Events on Trophodynamic Structure and Function in Taiwan Bank Marine Ecosystem. Diversity, 16572. 10.3390/d16090572 2024 Model application 0
Keramidas, Ioannis; Dimarchopoulou, Donna; Ofir, Eyal; Scotti, Marco; Tsikliras, Athanassios C.; Gal, Gideon; 2023. Ecotrophic perspective in fisheries management: a review of Ecopath with Ecosim models in European marine ecosystems. Frontiers in Marine Science, 10. 10.3389/fmars.2023.1182921 2023 Model application 2
Craig, J. Kevin; Link, Jason S.; 2023. It is past time to use ecosystem models tactically to support ecosystem‐based fisheries management: Case studies using Ecopath with Ecosim in an operational management context. Fish and Fisheries, 24381–406. 10.1111/faf.12733 2023 Model application 14
Bacalso, Regina Therese M.; Romagnoni, Giovanni; Wolff, Matthias; 2023. Identifying drivers of change during the recent two decades in the Visayan Sea using a trophic modeling approach. Frontiers in Marine Science, 10. 10.3389/fmars.2023.1099400 2023 Model application 1
Vilas, Daniel; Buszowski, Joe; Sagarese, Skyler; Steenbeek, Jeroen; Siders, Zach; Chagaris, David; 2023. Evaluating red tide effects on the West Florida Shelf using a spatiotemporal ecosystem modeling framework. Scientific Reports, 13. 10.1038/s41598-023-29327-z 2023 Model application 7
Al Ismaili, Sabrina; Dutta, Sachinandan; 2023. Ecosystem Characteristics and Trophic Model of the Artificial Reef Ecosystem in the Sea of Oman, Sultanate of Oman. Sustainability, 1516574. 10.3390/su152416574 2023 Model application 1
Ofir, Eyal; Corrales, Xavier; Coll, Marta; Heymans, Johanna Jacomina; Goren, Menachem; Steenbeek, Jeroen; Amitai, Yael; Shachar, Noam; Gal, Gideon; 2023. Evaluation of fisheries management policies in the alien species-rich Eastern Mediterranean under climate change. Frontiers in Marine Science, 10. 10.3389/fmars.2023.1155480 2023 Model application 3
Berenshtein, Igal; Sagarese, Skyler R.; Lauretta, Matthew V.; Schueller, Amy M.; Chagaris, David D.; 2023. Identifying trade-offs and reference points in support of ecosystem approaches to managing Gulf of Mexico menhaden. Frontiers in Marine Science, 9. 10.3389/fmars.2022.935324 2023 Model application 3
Chin, Chien-Pang; Su, Kuan-Yu; Liu, Kwang-Ming; 2023. Assessing the Fishing Impact on the Marine Ecosystem of Guishan Island in the Northeastern Waters of Taiwan Using Ecopath and Ecosim. Journal of Marine Science and Engineering, 112368. 10.3390/jmse11122368 2023 Model application 0
Sandra, Siby Mariya; Sreekanth, G. B.; Ranjeet, K.; 2023. Trophic fingerprinting of a pristine but rapidly deteriorating downstream region of a Western Ghats River. Environmental Monitoring and Assessment, 195. 10.1007/s10661-023-11501-5 2023 Model application 1
Otogo, G.A.; Enin, U.I.; Ndome, C.B.; 2023. Trophic Modelling of the Cross River Estuary Ecosystem, Nigeria. Journal of Marine Science Research and Oceanography, 61-18. 10.33140/JMSRO.06.01.01 2023 Model application 1
Stock, A.; Murray, C.C.; Gregr, E.J.; Steenbeek, J.; Woodburn, E.; Micheli, F.; Christensen, V.; Chan, K.M.A.; 2023. Exploring multiple stressor effects with Ecopath, Ecosim, and Ecospace: Research designs, modeling techniques, and future directions. Science of The Total Environment, 869161719. 10.1016/j.scitotenv.2023.161719 2023 Model application 14
Li, Zepeng; Chen, Yan; Wang, Gang; Mu, Jiandong; Sun, Yanfeng; Yu, Haolin; Xu, Jiangling; Yan, Ying; Luo, Shuangyue; Han, Fuqiang; Feng, Jie; Pan, Zhe; 2023. Ecological carrying capacity and carbon sequestration potential of bivalve shellfish in marine ranching: A case study in Bohai Bay, China. Frontiers in Marine Science, 10. 10.3389/fmars.2023.1174235 2023 Model application 5
Moutopoulos, Dimitrios K.; Douligeri, Alexandra S.; Ziou, Athina; Kiriazis, Nikolaos; Korakis, Athanasios; Petsis, Nikolaos; Katselis, George N.; 2023. A Modelling Approach for the Management of Invasive Species at a High-Altitude Artificial Lake. Limnological Review, 241–16. 10.3390/limnolrev24010001 2023 Model application 0
Pedro, Sara; Lemire, Mélanie; Hoover, Carie; Saint-Béat, Blanche; Janjua, Muhammad Y.; Herbig, Jennifer; Geoffroy, Maxime; Yunda-Guarin, Gustavo; Moisan, Marie-Ange; Boissinot, Justin; Tremblay, Jean-Éric; Little, Matthew; Chan, Laurie; Babin, Marcel; Kenny, Tiff-Annie; Maps, Frédéric; 2023. Structure and function of the western Baffin Bay coastal and shelf ecosystem. Elementa: Science of the Anthropocene, 11. 10.1525/elementa.2022.00015 2023 Model application 3
Ortiz, Marco; Hermosillo-Núñez, Brenda B.; Contreras, Manuel; 2023. Degradation of benthic ecosystem properties of Mejillones Bay (SE Pacific): implications for coastal management. Hydrobiologia, 850665–681. 10.1007/s10750-022-05115-0 2023 Model application 3
Zhang, Hongyan; Mason, Doran M.; Rutherford, Edward S.; Koops, Marten A.; Johnson, Timothy B.; Gorman, Ann Marie; Rowe, Mark; Zhu, Xinhua; Hossain, Monir; Cook, H. Andrew; 2023. Modelling effects of nutrients and hypoxia on Lake Erie's central basin foodweb. Aquatic Ecosystem Health & Management, 265–16. 10.14321/aehm.026.03.05 2023 Model application 1
Malfatti, Francisco; Lercari, Diego; Bergamino, Leandro; 2023. Integrating the local knowledge of fishers into an ecological model for the sustainable management of a protected coastal lagoon area in Uruguay. Aquatic Ecosystem Health & Management, 2683–95. 10.14321/aehm.026.03.83 2023 Model application 0
Ortega-Cisneros, K; Weigum, E; Chalmers, R; Grusd, S; Lombard, At; Shannon, L; 2022. Supporting marine spatial planning with an ecosystem model of Algoa Bay, South Africa. African Journal of Marine Science, 44189–204. 10.2989/1814232X.2022.2080268 2022 Model application 0
Uusitalo, Laura; Puntila-Dodd, Riikka; Artell, Janne; Jernberg, Susanna; 2022. Modelling Framework to Evaluate Societal Effects of Ecosystem Management. SSRN Electronic Journal, . 10.2139/ssrn.4270114 2022 Model application 0
Dimarchopoulou, Donna; Tsagarakis, Konstantinos; Sylaios, Georgios; Tsikliras, Athanassios C.; 2022. Ecosystem trophic structure and fishing effort simulations of a major fishing ground in the northeastern Mediterranean Sea (Thermaikos Gulf). Estuarine, Coastal and Shelf Science, 264107667. 10.1016/j.ecss.2021.107667 2022 Model application 11
Yin, Chengjie; Gong, Li; Chen, Yushun; Ni, Leyi; Pitcher, Tony J.; Kang, Bin; Guo, Longgen; 2022. Modeling ecosystem impacts of the invasive Japanese smelt Hypomesus nipponensis in Lake Erhai, southwestern China. Ecological Informatics, 67101488. 10.1016/j.ecoinf.2021.101488 2022 Model application 3
Li, Mi-Ling; Gillies, Emma J.; Briner, Renea; Hoover, Carie A.; Sora, Kristen J.; Loseto, Lisa L.; Walters, William J.; Cheung, William W. L.; Giang, Amanda; 2022. Investigating the dynamics of methylmercury bioaccumulation in the Beaufort Sea shelf food web: a modeling perspective. Environmental Science: Processes & Impacts, 241010–1025. 10.1039/D2EM00108J 2022 Model application 5
Kong, Yefu; Kang, Bin; Shi, Xiaotao; 2022. Modeling the Effects of Seasonal Fishing Moratorium on the Ecosystem of the Minjiang Estuary in Southeastern China. Frontiers in Marine Science, 9886799. 10.3389/fmars.2022.886799 2022 Model application 1
Xu, Lingyan; Song, Puqing; Wang, Yuyu; Xie, Bin; Huang, Lingfeng; Li, Yuan; Zheng, Xinqing; Lin, Longshan; 2022. Estimating the Impact of a Seasonal Fishing Moratorium on the East China Sea Ecosystem From 1997 to 2018. Frontiers in Marine Science, 9865645. 10.3389/fmars.2022.865645 2022 Model application 7
Sreekanth, Giri Bhavan; Mujawar, Sajiya; Lal, Dhanya Mohan; Mayekar, Trivesh; Stephen, Johnson; Raghavan, Rajeev; Kumar, Appukuttannair Biju; Ingole, Baban Shravan; 2022. Modelling the mixed impacts of multiple invasive alien fish species in a closed freshwater ecosystem in India. Environmental Science and Pollution Research, 2958278–58296. 10.1007/s11356-022-19794-8 2022 Model application 5
Sora, Kristen J.; Wabnitz, Colette C.C.; Steiner, Nadja S.; Sumaila, U. Rashid; Cheung, William W.L.; Niemi, Andrea; Loseto, Lisa L.; Hoover, Carie; 2022. Evaluation of the Beaufort Sea shelf structure and function in support of the Tarium Niryutait Marine Protected Area. Arctic Science, as–2020-0040. 10.1139/as-2020-0040 2022 Model application 5
Wang, Zhaoguo; Feng, Jie; Lozano-Montes, Hector M.; Loneragan, Neil R.; Zhang, Xiumei; Tian, Tao; Wu, Zhongxin; 2022. Estimating ecological carrying capacity for stock enhancement in marine ranching ecosystems of Northern China. Frontiers in Marine Science, 9936028. 10.3389/fmars.2022.936028 2022 Model application 10
Shi, Wenjing; Gui, Feng; Zhang, Manyao; Zeng, Xianmin; Xu, Kaida; Zhao, Sheng; Yang, C.; Chen, H.; Duan, P.; Jiao, F.; Wen, C.; 2022. Analysis of Energy Flow in the Sea Area of Zhongjieshan Islands and Assessment of Ecological Capacity of Sepiella Maindroni Based on Ecopath Model. E3S Web of Conferences, 35001002. 10.1051/e3sconf/202235001002 2022 Model application 0
Bhele, Upendra; Öğlü, Burak; Feldmann, Tõnu; Bernotas, Priit; Agasild, Helen; Zingel, Priit; Nõges, Peeter; Nõges, Tiina; Cremona, Fabien; 2022. Modelling how bottom-up and top-down processes control the major functional groups of biota in a large temperate shallow lake. Inland Waters, 12368–382. 10.1080/20442041.2022.2031813 2022 Model application 4
Hong, Xiaofan; Chen, Zuozhi; Zhang, Jun; Jiang, Yan’e; Gong, Yuyan; Cai, Yancong; Yang, Yutao; 2022. Construction and analysis of a coral reef trophic network for Qilianyu Islands, Xisha Islands. Acta Oceanologica Sinica, 4158–72. 10.1007/s13131-022-2047-8 2022 Model application 0
Ramírez-García, Arely; Moncayo Estrada, Rodrigo; Domínguez Domínguez, Omar; 2022. Tópicos ecológicos relacionados con las redes alimentarias: una revisión con énfasis sobre comunidades mundiales de peces de agua dulce. Ciencia Nicolaita, . 10.35830/cn.vi84.602 2022 Model application 0
Tsagarakis, Konstantinos; Libralato, Simone; Giannoulaki, Marianna; Touloumis, Konstantinos; Somarakis, Stylianos; Machias, Athanassios; Frangoulis, Constantin; Papantoniou, Georgia; Kavadas, Stefanos; Stoumboudi, Maria Th.; 2022. Drivers of the North Aegean Sea Ecosystem (Eastern Mediterranean) Through Time: Insights From Multidecadal Retrospective Analysis and Future Simulations. Frontiers in Marine Science, 9. 10.3389/fmars.2022.919793 2022 Model application 4
Zhang, Xinyan; Li, Yuanchao; Du, Jianguo; Qiu, Shuting; Xie, Bin; Chen, Weilin; Wang, Jianjia; Hu, Wenjia; Wu, Zhongjie; Chen, Bin; 2022. Effects of ocean warming and fishing on the coral reef ecosystem: A case study of Xisha Islands, South China Sea. Frontiers in Marine Science, 9. 10.3389/fmars.2022.1046106 2022 Model application 4
Haro, Daniela; Neira, Sergio; Hernández-Padilla, Juan Carlos; Arreguín-Sánchez, Francisco; Sabat, Pablo; Vargas, Cristian; 2022. Approaching the Ecological Role of the Squat Lobster (Munida gregaria) and the Fuegian Sprat (Sprattus fuegensis) in the Francisco Coloane Marine Area (Magellan Strait, Chile) Using a Pelagic Food Web Model. Animals, 133. 10.3390/ani13010003 2022 Model application 1
Yashiki, Tomoya; Nishikawa, Tetsuya; Sohma, Akio; 2022. NUTRIENT AND TEMPERATURE DEPENDENCE ANALYSIS OF AMMODYTES JAPONICUS BY ECOPATH WITH ECOSIM MODEL IN HARIMA-NADA SEA. Journal of Japan Society of Civil Engineers, Ser. B2 (Coastal Engineering), 78I_895–I_900. 10.2208/kaigan.78.2_I_895 2022 Model application 0
Hoover, C.; Giraldo, C.; Ehrman, A.; Suchy, K.D.; MacPhee, S.A.; Brewster, J.; Reist, J.D.; Power, M.; Swanson, H.; Loseto, L.; 2021. The Canadian Beaufort Shelf trophic structure: evaluating an ecosystem modelling approach by comparison with observed stable isotopic structure. Arctic Science, 1–21. 10.1139/as-2020-0035 2021 Model application 5
Szalaj, Dorota; Silva, Alexandra; Ré, Pedro; Cabral, Henrique; 2021. Detecting Regime Shifts in the Portuguese Continental Shelf Ecosystem Within the Last Three Decades. Frontiers in Marine Science, 8629130. 10.3389/fmars.2021.629130 2021 Model application 7
Steyn, C.; Shannon, L.J.; Blamey, L.K.; 2021. Changes in food-web structure and energy flow in kelp forest ecosystems on the south-west coast of South Africa following the invasion of Jasus lalandii. Food Webs, 28e00200. 10.1016/j.fooweb.2021.e00200 2021 Model application 0
Vilas, Daniel; Coll, Marta; Corrales, Xavier; Steenbeek, Jeroen; Piroddi, Chiara; Macias, Diego; Ligas, Alessandro; Sartor, Paolo; Claudet, Joachim; 2021. Current and potential contributions of the Gulf of Lion Fisheries Restricted Area to fisheries sustainability in the NW Mediterranean Sea. Marine Policy, 123104296. 10.1016/j.marpol.2020.104296 2021 Model application 8
Aubin, J; Baizeau, V; Jaeger, C; Roucaute, M; Gamito, S; 2021. Modeling trophic webs in freshwater fishpond systems using Ecopath: towards better polyculture management. Aquaculture Environment Interactions, 13311–322. 10.3354/aei00406 2021 Model application 8
Wardaszko, Marcin; Meijer, Sebastiaan; Lukosch, Heide; Kanegae, Hidehiko; Kriz, Willy Christian; Grzybowska-Brzezińska, Mariola; Goncalves, Magali; Steenbeek, Jeroen; Tomczak, Maciej; Romagnoni, Giovanni; Puntilla, Rikka; Karvinen, Ville; Santos, Carlos; Keijser, Xander; Abspoel, Lodewijk; Warmelink, Harald; Mayer, Igor; 2021. Food-Web Modeling in the Maritime Spatial Planning Challenge Simulation Platform: Results from the Baltic Sea Region. , 11988290–305. [1] 2021 Model application 1
Vilas, Daniel; Coll, Marta; Pedersen, Torstein; Corrales, Xavier; Filbee‐Dexter, Karen; Wernberg, Thomas; 2021. Future trajectories of change for an Arctic deep‐sea ecosystem connected to coastal kelp forests. Restoration Ecology, 29. 10.1111/rec.13327 2021 Model application 3
Horn, Sabine; Coll, Marta; Asmus, Harald; Dolch, Tobias; 2021. Food web models reveal potential ecosystem effects of seagrass recovery in the northern Wadden Sea. Restoration Ecology, 29. 10.1111/rec.13328 2021 Model application 15
Couce Montero, Lorena; Christensen, Villy; Castro Hernández, José Juan; 2021. Simulating trophic impacts of fishing scenarios on two oceanic islands using Ecopath with Ecosim. Marine Environmental Research, 169105341. 10.1016/j.marenvres.2021.105341 2021 Model application 8
Lewis, Kristy A.; Rose, Kenneth A.; de Mutsert, Kim; Sable, Shaye; Ainsworth, Cameron; Brady, Damian C.; Townsend, Howard; 2021. Using Multiple Ecological Models to Inform Environmental Decision-Making. Frontiers in Marine Science, 8625790. 10.3389/fmars.2021.625790 2021 Model application 18
Woodruff, Patricia; van Poorten, Brett; Walters, Carl; Christensen, Villy; 2021. Potential effects of invasive Dreissenid mussels on a pelagic freshwater ecosystem: using an ecosystem model to simulate mussel invasion in a sockeye lake. Aquatic Invasions, 16129–146. 10.3391/ai.2021.16.1.09 2021 Model application 5
Sánchez-Jiménez, Astrid; MacMillan, Douglas; Wolff, Matthias; Schlüter, Achim; Fujitani, Marie; 2021. The Importance of Values in Predicting and Encouraging Environmental Behavior: Reflections From a Costa Rican Small-Scale Fishery. Frontiers in Marine Science, 8543075. 10.3389/fmars.2021.543075 2021 Model application 4
van Leeuwen, Sm; Salgado, H; Bailey, Jl; Beecham, J; Iriarte, Jl; García-García, L; Thorpe, R; 2021. Climate change, marine resources and a small Chilean community: making the connections. Marine Ecology Progress Series, 680223–246. 10.3354/meps13934 2021 Model application 4
Khan, Mohamed Feroz; Panikkar, Preetha; Salim, Sibina Mol; Leela, Ramya Vijayakumar; Sarkar, Uttam Kumar; Das, Basanta Kumar; Eregowda, Vijayakumar Muttenahalli; 2021. Modeling impacts of invasive sharp tooth African catfish Clarias gariepinus (Burchell 1822) and Mozambique tilapia Oreochromis mossambicus (Peters, 1852) on the ecosystem of a tropical reservoir ecosystem in India. Environmental Science and Pollution Research, . 10.1007/s11356-021-14667-y 2021 Model application 11
Dias, Beatriz S.; Frisk, Michael G.; Jordaan, Adrian; 2021. Contrasting fishing effort reduction and habitat connectivity as management strategies to promote alewife ( Alosa pseudoharengus ) recovery using an ecosystem model. Limnology and Oceanography, lno.11871. 10.1002/lno.11871 2021 Model application 6
Hernández-Padilla, Juan Carlos; Zetina-Rejón, Manuel J.; Arreguín-Sánchez, F.; del Monte-Luna, Pablo; Nieto-Navarro, José T.; Salcido-Guevara, Luis A.; 2021. Structure and function of the southeastern Gulf of California ecosystem during low and high sea surface temperature variability. Regional Studies in Marine Science, 43101686. 10.1016/j.rsma.2021.101686 2021 Model application 5
Paradell, O.G.; Methion, S.; Rogan, E., Lopez, B.D.; 2021. Modelling ecosystem dynamics to assess the effect of coastal fisheries on cetacean species. Journal of Environmental Management, 285112175. 10.1016/j.jenvman.2021.112175 2021 Model application 14
Weijerman, Mariska; Oyafuso, Zack S; Leong, Kirsten M; Oleson, Kirsten L L; Winston, Morgan; Travers-Trolet, Morgane; 2021. Supporting Ecosystem-based Fisheries Management in meeting multiple objectives for sustainable use of coral reef ecosystems. ICES Journal of Marine Science, 782999–3011. 10.1093/icesjms/fsaa194 2021 Model application 4
Ricci, P.; Sion, L.; Capezzuto, F.; Cipriano, G.; D'Onghia, G.; Libralato, S.; Maiorano, P.; Tursi, A.; Carlucci, R.; 2021. Dataset and species aggregation method applied to food-web models in the Northern Ionian Sea (Central Mediterranean Sea). Data in Brief, 36106964. 10.1016/j.dib.2021.106964 2021 Model application 1
Lira, Alex Souza; Lucena-Frédou, Flávia; Le Loc'h, François; 2021. How the fishing effort control and environmental changes affect the sustainability of a tropical shrimp small scale fishery. Fisheries Research, 235105824. 10.1016/j.fishres.2020.105824 2021 Model application 16
Drew, Katie; Cieri, Matthew; Schueller, Amy M.; Buchheister, Andre; Chagaris, David; Nesslage, Geneviève; McNamee, Jason E.; Uphoff, James H.; 2021. Balancing Model Complexity, Data Requirements, and Management Objectives in Developing Ecological Reference Points for Atlantic Menhaden. Frontiers in Marine Science, 8608059. 10.3389/fmars.2021.608059 2021 Model application 14
Morales-Zárate, M.V.; López-Ramírez, J.A.; Salinas-Zavala, C.A.; 2021. Loggerhead marine turtle (Caretta caretta) ecological facts from a trophic relationship model in a hot spot fishery area: Gulf of Ulloa, Mexico. Ecological Modelling, 439109327. 10.1016/j.ecolmodel.2020.109327 2021 Model application 3
Sinha, Swagata; Banerjee, Arnab; Rakshit, Nabyendu; Raman, Akkur V.; Bhadury, Punyasloke; Ray, Santanu; 2021. Importance of benthic-pelagic coupling in food-web interactions of Kakinada Bay, India. Ecological Informatics, 61101208. 10.1016/j.ecoinf.2020.101208 2021 Model application 8
García-Rodríguez, Encarnación; Coll, Marta; Vivas, Miguel; Bellido, José María; Esteban, Antonio; Torres, María Ángeles; 2021. A food-web comparative modeling approach highlights ecosystem singularities of the Gulf of Alicante (Western Mediterranean Sea). Journal of Sea Research, 174102073. 10.1016/j.seares.2021.102073 2021 Model application 5
Luczkovich, Joseph J.; Johnson, Jeffrey C.; Deehr, Rebecca A.; Hart, Kevin J.; Clough, Lisa; Griffith, David C.; 2021. Linking Fishing Behavior and Ecosystem Dynamics Using Social and Ecological Network Models. Frontiers in Ecology and Evolution, 9662412. 10.3389/fevo.2021.662412 2021 Model application 0
Sinnickson, Dylan; Chagaris, David; Allen, Micheal; 2021. Exploring Impacts of River Discharge on Forage Fish and Predators Using Ecopath With Ecosim. Frontiers in Marine Science, 8689950. 10.3389/fmars.2021.689950 2021 Model application 8
He, Cong-Ying; Mao, Shuo-Qian; Yan, Xiao-Jun; Meng, Kuan-Hong; Hu, Dai-Fu; 2021. Comparison of the 2010 and 2020 ecosystem structures in Xihu Harbor based on the Ecopath model. Ocean & Coastal Management, 213105873. 10.1016/j.ocecoaman.2021.105873 2021 Model application 1
Rupp, Aurora; Bornatowski, Hugo; 2021. Food web model to assess the fishing impacts and ecological role of elasmobranchs in a coastal ecosystem of Southern Brazil. Environmental Biology of Fishes, 104905–921. 10.1007/s10641-021-01120-9 2021 Model application 9
Giacomuzzo, Emanuele; Jordán, Ferenc; 2021. Food web aggregation: effects on key positions. Oikos, 1302170–2181. 10.1111/oik.08541 2021 Model application 8
Surma, Szymon; Pakhomov, Evgeny A.; Pitcher, Tony J.; 2021. Pacific herring (Clupea pallasii) as a key forage fish in the southeastern Gulf of Alaska. Deep Sea Research Part II: Topical Studies in Oceanography, 105001. 10.1016/j.dsr2.2021.105001 2021 Model application 3
Endrédi, Anett; Patonai, Katalin; Podani, János; Libralato, Simone; Jordán, Ferenc; 2021. Who Is Where in Marine Food Webs? A Trait-Based Analysis of Network Positions. Frontiers in Marine Science, 8636042. 10.3389/fmars.2021.636042 2021 Model application 10
Pedersen, Torstein; Mikkelsen, Nina; Lindstrøm, Ulf; Renaud, Paul E.; Nascimento, Marcela C.; Blanchet, Marie-Anne; Ellingsen, Ingrid H.; Jørgensen, Lis L.; Blanchet, Hugues; 2021. Overexploitation, Recovery, and Warming of the Barents Sea Ecosystem During 1950–2013. Frontiers in Marine Science, 8732637. 10.3389/fmars.2021.732637 2021 Model application 16
Dong, Shipeng; Wang, Fang; Zhang, Dongxu; Yu, Liye; Pu, Weijia; Xu, Xian; Xie, Yicheng; 2021. Assessment of the Carrying Capacity of Integrated Pond Aquaculture of Portunus trituberculatus at the Ecosystem Level. Frontiers in Marine Science, 8747891. 10.3389/fmars.2021.747891 2021 Model application 5
Zeng, Yong; Zhao, Yanwei; Qi, Zefeng; 2021. Evaluating the ecological state of Chinese Lake Baiyangdian (BYD) based on Ecological Network Analysis. Ecological Indicators, 127107788. 10.1016/j.ecolind.2021.107788 2021 Model application 21
Petriki, Olga; Moutopoulos, Dimitrios K.; Tsagarakis, Konstantinos; Tsionki, Ioanna; Papantoniou, Georgia; Mantzouni, Irene; Barbieri, Roberta; Stoumboudi, Maria Th.; 2021. Assessing the Fisheries and Ecosystem Structure of the Largest Greek Lake (Lake Trichonis). Water, 133329. 10.3390/w13233329 2021 Model application 3
Sadchatheeswaran, Saachi; Branch, George M.; Shannon, Lynne J.; Coll, Marta; Steenbeek, Jeroen; 2021. A novel approach to explicitly model the spatiotemporal impacts of structural complexity created by alien ecosystem engineers in a marine benthic environment. Ecological Modelling, 459109731. 10.1016/j.ecolmodel.2021.109731 2021 Model application 3
Susini, Irene; Todd, Victoria L.G.; 2021. Predictive capacity of Ecopath with Ecosim: Model performance and ecological indicators’ response to imprecision. Environmental Modelling & Software, 143105098. 10.1016/j.envsoft.2021.105098 2021 Model application 11
Sreekanth, G. B.; Chakraborty, S. K.; Jaiswar, A. K.; Zacharia, P. U.; Mohamed, K. S.; 2021. Modeling the impacts of fishing regulations in a tropical Indian estuary using Ecopath with Ecosim approach. Environment, Development and Sustainability, 2317745–17763. 10.1007/s10668-021-01410-3 2021 Model application 6
Wang, Shuran Cindy; Liu, Xueqin; Liu, Yong; Wang, Hongzhu; 2021. Disentangling effects of multiple stressors on matter flow in a lake food web. Ecology and Evolution, 119652–9664. 10.1002/ece3.7789 2021 Model application 6
Ortiz, Marco; Jordán, Ferenc; González, Jorge E.; 2021. Exploring Harvest Strategies in a Benthic Habitat in the Humboldt Current System (Chile): A Study Case. , 127–141. [2] 2021 Model application 1
Ortiz, Marco; Jordán, Ferenc; Neira, Sergio; Arancibia, Hugo; 2021. Using Ecosystem Models to Evaluate Stock Recovery in Two Hake Species from Chile. , 77–94. [3] 2021 Model application 2
Vilas, Daniel; Coll, Marta; Pedersen, Torstein; Corrales, Xavier; Filbee-Dexter, Karen; Pedersen, Morten Foldager; Norderhaug, Kjell Magnus; Fredriksen, Stein; Wernberg, Thomas; Ramírez-Llodra, Eva; 2020. Kelp-carbon uptake by Arctic deep-sea food webs plays a noticeable role in maintaining ecosystem structural and functional traits. Journal of Marine Systems, 203103268. 10.1016/j.jmarsys.2019.103268 2020 Model application 19
Tajzadehnamin, Mona; Valinassab, Tooraj; Ramezani- Fard, Ehsan; Ehteshami, Fariborz; 2020. Trophic dynamics analysis and ecosystem structure for some fish species of northern Oman Sea. Iranian Journal of Fisheries Sciences, 19. 10.22092/ijfs.2020.122699 2020 Model application 3
Manju Lekshmi, N.; Sreekanth, G. B.; Singh, Narendra Pratap; Vennila, A.; Ratheesh Kumar, R.; Pandey, P K; 2020. Ecopath modelling approach for the impact assessment of a small-scale coastal aquaculture system in Goa, India. Indian Journal of Fisheries, 67. 10.21077/ijf.2020.67.3.88300-05 2020 Model application 3
Pennino, Maria Grazia; Bevilacqua, Ana Helena; Torres, M. Angeles; Bellido, Jose M.; Sole, Jordi; Steenbeek, Jeroen; Coll, Marta; 2020. Discard ban: A simulation-based approach combining hierarchical Bayesian and food web spatial models. Marine Policy, 116103703. 10.1016/j.marpol.2019.103703 2020 Model application 8
Booth, Shawn; Walters, William J; Steenbeek, Jeroen; Christensen, Villy; Charmasson, Sabine; 2020. An Ecopath with Ecosim model for the Pacific coast of eastern Japan: Describing the marine environment and its fisheries prior to the Great East Japan earthquake. Ecological Modelling, 428109087. 10.1016/j.ecolmodel.2020.109087 2020 Model application 9
Saygu, İsmet; Heymans, Johanna J; Fox, Clive; Özbilgin, Hüseyin; Bentley, Jacob W; Eryaşar, Ahmet Raif; Gökçe, Gökhan; Marta, Coll; 2020. Community-level impacts of trawl selectivity in the Eastern Mediterranean Sea assessed using an ecosystem modelling approach. ICES Journal of Marine Science, 772918–2932. 10.1093/icesjms/fsaa167 2020 Model application 1
Hernvann, Pierre-Yves; Gascuel, Didier; Grüss, Arnaud; Druon, Jean-Noël; Kopp, Dorothée; Perez, Ilan; Piroddi, Chiara; Robert, Marianne; 2020. The Celtic Sea Through Time and Space: Ecosystem Modeling to Unravel Fishing and Climate Change Impacts on Food-Web Structure and Dynamics. Frontiers in Marine Science, 7578717. 10.3389/fmars.2020.578717 2020 Model application 22
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2020. Simulating trade-offs between socio-economic and conservation objectives for Lake Victoria (East Africa) using multispecies, multifleet ecosystem models. Fisheries Research, 229105593. 10.1016/j.fishres.2020.105593 2020 Model application 4
Bulgakova, T. I.; Bobyrev, A. E.; 2020. The Importance of Trophological Research in Multispecies Fishery Analysis. Biology Bulletin Reviews, 1019–27. 10.1134/S207908642001003X 2020 Model application 1
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2020. Ecosystem modelling of data-limited fisheries: How reliable are Ecopath with Ecosim models without historical time series fitting?. Journal of Great Lakes Research, 46414–428. 10.1016/j.jglr.2020.01.001 2020 Model application 9
Wang, Ying; Hu, Jianfeng; Pan, Haoran; Failler, Pierre; 2020. Ecosystem-based fisheries management in the Pearl River Delta: Applying a computable general equilibrium model. Marine Policy, 112103784. 10.1016/j.marpol.2019.103784 2020 Model application 10
Whitehouse, George A.; Aydin, Kerim Y.; 2020. Assessing the sensitivity of three Alaska marine food webs to perturbations: an example of Ecosim simulations using Rpath. Ecological Modelling, 429109074. 10.1016/j.ecolmodel.2020.109074 2020 Model application 9
Du, Jianguo; Makatipu, Petrus Christianus; Tao, Lily S.R.; Pauly, Daniel; Cheung, William W.L.; Peristiwady, Teguh; Liao, Jianji; Chen, Bin; 2020. Comparing trophic levels estimated from a tropical marine food web using an ecosystem model and stable isotopes. Estuarine, Coastal and Shelf Science, 233106518. 10.1016/j.ecss.2019.106518 2020 Model application 18
Haro, Daniela; Sabat, Pablo; Arreguín-Sánchez, Francisco; Neira, Sergio; Hernández-Padilla, Juan Carlos; 2020. Trophic role of the humpback whale (Megaptera novaeangliae) in the feeding area of Magellan Strait, Chile. Ecological Indicators, 109105796. 10.1016/j.ecolind.2019.105796 2020 Model application 7
Perryman, Holly A.; Tarnecki, Joseph H.; Grüss, Arnaud; Babcock, Elizabeth A.; Sagarese, Skyler R.; Ainsworth, Cameron H.; Gray DiLeone, Alisha M.; 2020. A revised diet matrix to improve the parameterization of a West Florida Shelf Ecopath model for understanding harmful algal bloom impacts. Ecological Modelling, 416108890. 10.1016/j.ecolmodel.2019.108890 2020 Model application 2
Innes-Gold, A; Heinichen, M; Gorospe, K; Truesdale, C; Collie, J; Humphries, A; 2020. Modeling 25 years of food web changes in Narragansett Bay (USA) as a tool for ecosystem-based management. Marine Ecology Progress Series, 65417–33. 10.3354/meps13505 2020 Model application 5
Papapanagiotou, George; Tsagarakis, Konstantinos; Koutsidi, Martha; Tzanatos, Evangelos; 2020. Using traits to build and explain an ecosystem model: Ecopath with Ecosim modelling of the North Aegean Sea (Eastern Mediterranean). Estuarine, Coastal and Shelf Science, 236106614. 10.1016/j.ecss.2020.106614 2020 Model application 8
Lucey, Sean M.; Gaichas, Sarah K.; Aydin, Kerim Y.; 2020. Conducting reproducible ecosystem modeling using the open source mass balance model Rpath. Ecological Modelling, 427109057. 10.1016/j.ecolmodel.2020.109057 2020 Model application 16
Giralt Paradell, Oriol; Díaz López, Bruno; Methion, Séverine; Rogan, Emer; 2020. Food-web interactions in a coastal ecosystem influenced by upwelling and terrestrial runoff off North-West Spain. Marine Environmental Research, 157104933. 10.1016/j.marenvres.2020.104933 2020 Model application 11
Bhele, Upendra; Öğlü, Burak; Tuvikene, Arvo; Bernotas, Priit; Silm, Maidu; Järvalt, Ain; Agasild, Helen; Zingel, Priit; Seller, Siim; Timm, Henn; Nõges, Peeter; Nõges, Tiina; Cremona, Fabien; 2020. How long-term water level changes influence the spatial distribution of fish and other functional groups in a large shallow lake. Journal of Great Lakes Research, S0380133020300472. 10.1016/j.jglr.2020.02.010 2020 Model application 9
Argüelles-Jiménez, Jimmy; Alva-Basurto, Jorge Christian; Pérez-España, Horacio; Zetina-Rejón, Manuel J.; Arias-González, Jesús Ernesto; 2020. The measurement of ecosystem development in Caribbean coral reefs through topological indices. Ecological Indicators, 110105866. 10.1016/j.ecolind.2019.105866 2020 Model application 10
Murawski, Steven A.; Ainsworth, Cameron H.; Gilbert, Sherryl; Hollander, David J.; Paris, Claire B.; Schlüter, Michael; Wetzel, Dana L.; Suprenand, Paul M.; Hoover, Carie; Dornberger, Lindsey N.; Johnson, Chris J.; 2020. Preparing for the Inevitable: Ecological and Indigenous Community Impacts of Oil Spill-Related Mortality in the United States’ Arctic Marine Ecosystem. , 470–493. [4] 2020 Model application 4
Boschetti, Fabio; Prunera, Karine; Vanderklift, Mathew A; Thomson, Damian P; Babcock, Russell C; Doropoulos, Christopher; Cresswell, Anna; Lozano-Montes, Hector; Griffith, Gary; 2020. Information-theoretic measures of ecosystem change, sustainability, and resilience. ICES Journal of Marine Science, 771532–1544. 10.1093/icesjms/fsz105 2020 Model application 5
Püts, Miriam; Taylor, Marc; Núñez-Riboni, Ismael; Steenbeek, Jeroen; Stäbler, Moritz; Möllmann, Christian; Kempf, Alexander; 2020. Insights on integrating habitat preferences in process-oriented ecological models – a case study of the southern North Sea. Ecological Modelling, 431109189. 10.1016/j.ecolmodel.2020.109189 2020 Model application 13
Livne, Leigh; Grossowicz, Michal; Tchernov, Dan; Ayalon, Ofira; 2020. Predicting Impacts of Offshore Monoculture Farm Expansion in Ultra-Oligotrophic Waters of the Levantine Basin. Frontiers in Marine Science, 7556. 10.3389/fmars.2020.00556 2020 Model application 3
Halouani, Ghassen; Villanueva, Ching-Maria; Raoux, Aurore; Dauvin, Jean Claude; Ben Rais Lasram, Frida; Foucher, Eric; Le Loc'h, François; Safi, Georges; Araignous, Emma; Robin, Jean Paul; Niquil, Nathalie; 2020. A spatial food web model to investigate potential spillover effects of a fishery closure in an offshore wind farm. Journal of Marine Systems, 212103434. 10.1016/j.jmarsys.2020.103434 2020 Model application 28
Rohal, Melissa; Ainsworth, Cameron; Lupher, Brach; Montagna, Paul A.; Paris, Claire B.; Perlin, Natalie; Suprenand, Paul Mark; Yoskowitz, David; 2020. The effect of the Deepwater Horizon oil spill on two ecosystem services in the Northern Gulf of Mexico. Environmental Modelling & Software, 133104793. 10.1016/j.envsoft.2020.104793 2020 Model application 11
Grossowicz, Michal; Ofir, Eyal; Shabtay, Ateret; Wood, Julie; Biton, Eli; Belkin, Natalia; Frid, Ori; Sisma-Ventura, Guy; Kress, Nurit; Berman-Frank, Ilana; Gal, Gideon; 2020. Modeling the effects of brine outflow from desalination plants on coastal food-webs of the Levantine basin (eastern Mediterranean Sea). Desalination, 496114757. 10.1016/j.desal.2020.114757 2020 Model application 11
Abdou, Khaled; Le Loc’h, François; Gascuel, Didier; Romdhane, Mohamed Salah; Aubin, Joël; Ben Rais Lasram, Frida; 2020. Combining ecosystem indicators and life cycle assessment for environmental assessment of demersal trawling in Tunisia. The International Journal of Life Cycle Assessment, 25105–119. 10.1007/s11367-019-01651-5 2020 Model application 13
Steenbeek, Jeroen; Romagnoni, Giovanni; Bentley, Jacob W.; Heymans, Johanna J.; Serpetti, Natalia; Gonçalves, Magali; Santos, Carlos; Warmelink, Harald; Mayer, Igor; Keijser, Xander; Fairgrieve, Rhona; Abspoel, Lodewijk; 2020. Combining ecosystem modeling with serious gaming in support of transboundary maritime spatial planning. Ecology and Society, 25art21. 10.5751/ES-11580-250221 2020 Model application 19
Subramaniam, Roshni C.; Melbourne-Thomas, Jessica; Corney, Stuart P.; Alexander, Karen; Péron, Clara; Ziegler, Philippe; Swadling, Kerrie M.; 2020. Time-Dynamic Food Web Modeling to Explore Environmental Drivers of Ecosystem Change on the Kerguelen Plateau. Frontiers in Marine Science, 7641. 10.3389/fmars.2020.00641 2020 Model application 6
Khatun, Mst Halima; Barman, Partho Protim; Yi, Jundong; Lupa, Saymuna Tarin; Zahangir, Md Mahiuddin; Liu, Qun; 2020. A preliminary snapshot of the trophic model and ecosystem attributes of Kaptai reservoir ecosystem, Bangladesh. Journal of Oceanology and Limnology, . 10.1007/s00343-020-9284-5 2020 Model application 4
Smith, Mason; Chagaris, David; Paperno, Richard; Markwith, Scott; 2020. Ecosystem structure and resilience of the Florida Bay Estuary: an original ecosystem model with implications for everglades restoration. Marine and Freshwater Research, . 10.1071/MF20125 2020 Model application 11
Chagaris, David; Drew, Katie; Schueller, Amy; Cieri, Matt; Brito, Joana; Buchheister, Andre; 2020. Ecological Reference Points for Atlantic Menhaden Established Using an Ecosystem Model of Intermediate Complexity. Frontiers in Marine Science, 7606417. 10.3389/fmars.2020.606417 2020 Model application 28
Bulgakova, T. I.; Bobyrev, A. E.; 2020. The Importance of Trophological Research in Multispecies Fishery Analysis. Biology Bulletin Reviews, 1019–27. 10.1134/S207908642001003X 2020 Model application 0
Chagaris, David D.; Patterson, William F.; Allen, Micheal S.; 2020. Relative Effects of Multiple Stressors on Reef Food Webs in the Northern Gulf of Mexico Revealed via Ecosystem Modeling. Frontiers in Marine Science, 7513. 10.3389/fmars.2020.00513 2020 Model application 18
Sadchatheeswaran, Saachi; Branch, George M; Shannon, Lynne J; Moloney, Coleen L; Coll, Marta; Robinson, Tamara B; 2020. Modelling changes in trophic and structural impacts of alien ecosystem engineers on a rocky-shore island. Ecological Modelling, 433109227. 10.1016/j.ecolmodel.2020.109227 2020 Model application 4
Mendoza, José Carlos; Hernández, José Carlos; 2019. Modelo trófico del ecosistema rocoso litoral de la isla de El Hierro, islas Canarias. Scientia Insularum. Revista de Ciencias Naturales en islas, 2121–150. 10.25145/j.SI.2019.02.06 2019 Model application 0
Zhang, Chang-Ik; Seo, Young-Il; Kang, Hee-Joong; Lim, Jung-Hyun; 2019. Exploitable carrying capacity and potential biomass yield of sectors in the East China Sea, Yellow Sea, and East Sea/Sea of Japan large marine ecosystems. Deep Sea Research Part II: Topical Studies in Oceanography, 16316–28. 10.1016/j.dsr2.2018.11.016 2019 Model application 10
Sánchez-Jiménez, Astrid; Fujitani, Marie; MacMillan, Douglas; Schlüter, Achim; Wolff, Matthias; 2019. Connecting a Trophic Model and Local Ecological Knowledge to Improve Fisheries Management: The Case of Gulf of Nicoya, Costa Rica. Frontiers in Marine Science, 6126. 10.3389/fmars.2019.00126 2019 Model application 14
Lamb, Philip D; Hunter, Ewan; Pinnegar, John K; Doyle, Thomas K; Creer, Simon; Taylor, Martin I; 2019. Inclusion of jellyfish in 30+ years of Ecopath with Ecosim models. ICES Journal of Marine Science, 761941–1950. 10.1093/icesjms/fsz165 2019 Model application 19
Dimarchopoulou, Donna; Keramidas, Ioannis; Tsagarakis, Konstantinos; Tsikliras, Athanassios C.; 2019. Ecosystem Models and Effort Simulations of an Untrawled Gulf in the Central Aegean Sea. Frontiers in Marine Science, 6648. 10.3389/fmars.2019.00648 2019 Model application 23
Yang, S.; Pan, T.; Wang, X.; Sun, Y.; Zhang, Y.; Zhao, C.; Gai, Y.; Wang, Z.; Zhang, H.; 2019. Dominant aquatic species and their hydrological niches in freshwater ecosystems in a developing city. Marine and Freshwater Research, 70615. 10.1071/MF18336 2019 Model application 2
Gray DiLeone, A.M.; Ainsworth, C.H.; 2019. Effects of Karenia brevis harmful algal blooms on fish community structure on the West Florida Shelf. Ecological Modelling, 392250–267. 10.1016/j.ecolmodel.2018.11.022 2019 Model application 25
Adebola, Tunde; de Mutsert, Kim; 2019. Compartive network analyses for Nigerian coastal waters using two ecopath models developed for the years 1985 and 2000. Fisheries Research, 21333–41. 10.1016/j.fishres.2018.12.028 2019 Model application 7
Adebola, Tunde; Mutsert, Kim; 2019. Spatial simulation of redistribution of fishing effort in Nigerian coastal waters using Ecospace. Ecosphere, 10e02623. 10.1002/ecs2.2623 2019 Model application 6
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2019. Ecosystem models of Lake Victoria (East Africa): Can Ecopath with Ecosim and Atlantis predict similar policy outcomes?. Journal of Great Lakes Research, 451260–1273. 10.1016/j.jglr.2019.09.018 2019 Model application 11
Xu, M; Qi, L; Zhang, Lb; Zhang, T; Yang, Hs; Zhang, Yl; 2019. Ecosystem attributes of trophic models before and after construction of artificial oyster reefs using Ecopath. Aquaculture Environment Interactions, 11111–127. 10.3354/aei00284 2019 Model application 26
Rahman, Muhammed Forruq; Qun, Lin; Xiujuan, Shan; Chen, Yunlong; Ding, Xiaosong; Liu, Qun; 2019. Temporal Changes of Structure and Functioning of the Bohai Sea Ecosystem: Insights from Ecopath Models. Thalassas: An International Journal of Marine Sciences, 35625–641. 10.1007/s41208-019-00139-1 2019 Model application 14
Li, Chun-hua; Xian, Yi; Ye, Chun; Wang, Yan-hua; Wei, Wei-wei; Xi, Hai-yan; Zheng, Bing-hui; 2019. Wetland ecosystem status and restoration using the Ecopath with Ecosim (EWE) model. Science of The Total Environment, 658305–314. 10.1016/j.scitotenv.2018.12.128 2019 Model application 20
Lam, Me; Pitcher, Tj; Surma, S; Scott, J; Kaiser, M; White, Asj; Pakhomov, Ea; Ward, Lm; 2019. Value- and ecosystem-based management approach: the Pacific herring fishery conflict. Marine Ecology Progress Series, 617341–364. 10.3354/meps12972 2019 Model application 24
Fourriére, Manon; Alvarado, Juan José; Cortés, Jorge; Taylor, Marc H.; Ayala-Bocos, Arturo; Azofeifa-Solano, Juan Carlos; Arauz, Randall; Heidemeyer, Maike; López-Garro, Andrés; Zanella, Ilena; Wolff, Matthias; 2019. Energy flow structure and role of keystone groups in shallow water environments in Isla del Coco, Costa Rica, Eastern Tropical Pacific. Ecological Modelling, 39674–85. 10.1016/j.ecolmodel.2019.01.004 2019 Model application 12
Walters, Carl; Christensen, Villy; 2019. Effect of non-additivity in mortality rates on predictions of potential yield of forage fishes. Ecological Modelling, 410108776. 10.1016/j.ecolmodel.2019.108776 2019 Model application 7
Wang, Yuyu; Kao, Yu-Chun; Zhou, Yangming; Zhang, Huan; Yu, Xiubo; Lei, Guangchun; 2019. Can water level management, stock enhancement, and fishery restriction offset negative effects of hydrological changes on the four major Chinese carps in China’s largest freshwater lake?. Ecological Modelling, 4031–10. 10.1016/j.ecolmodel.2019.03.020 2019 Model application 21
Bevilacqua, Ana Helena V.; Angelini, Ronaldo; Steenbeek, Jeroen; Christensen, Villy; Carvalho, Adriana R.; 2019. Following the Fish: The Role of Subsistence in a Fish-based Value Chain. Ecological Economics, 159326–334. 10.1016/j.ecolecon.2019.02.004 2019 Model application 19
Kadin, Martina; Frederiksen, Morten; Niiranen, Susa; Converse, Sarah J.; 2019. Linking demographic and food‐web models to understand management trade‐offs. Ecology and Evolution, 98587–8600. 10.1002/ece3.5385 2019 Model application 4
Clores, Michael A.; Cuesta, Michael A.; 2019. Trophic Models of Seagrass Ecosystems in Maqueda Channel, Caramoan Peninsula, Philippines. Applied Environmental Research, 14–31. 10.35762/AER.2019.41.3.2 2019 Model application 1
Fu, Caihong; Xu, Yi; Bundy, Alida; Grüss, Arnaud; Coll, Marta; Heymans, Johanna J.; Fulton, Elizabeth A.; Shannon, Lynne; Halouani, Ghassen; Velez, Laure; Akoglu, Ekin; Lynam, Christopher P.; Shin, Yunne-Jai; 2019. Making ecological indicators management ready: Assessing the specificity, sensitivity, and threshold response of ecological indicators. Ecological Indicators, 10516–28. 10.1016/j.ecolind.2019.05.055 2019 Model application 39
Bentley, Jacob W; Serpetti, Natalia; Fox, Clive; Heymans, Johanna J; Reid, David G; Coll, Marta; 2019. Fishers’ knowledge improves the accuracy of food web model predictions. ICES Journal of Marine Science, 76897–912. 10.1093/icesjms/fsz003 2019 Model application 18
Surma, Szymon; Christensen, Villy; Kumar, Rajeev; Ainsworth, Cameron H.; Pitcher, Tony J.; 2019. High-Resolution Trophic Models Reveal Structure and Function of a Northeast Pacific Ecosystem. Frontiers in Marine Science, 6625. 10.3389/fmars.2019.00625 2019 Model application 5
Kaplan, Ic; Francis, Tb; Punt, Ae; Koehn, Le; Curchitser, E; Hurtado-Ferro, F; Johnson, Kf; Lluch-Cota, Se; Sydeman, Wj; Essington, Te; Taylor, N; Holsman, K; MacCall, Ad; Levin, Ps; 2019. A multi-model approach to understanding the role of Pacific sardine in the California Current food web. Marine Ecology Progress Series, 617307–321. 10.3354/meps12504 2019 Model application 33
Costalago, David; Bauer, Barbara; Tomczak, Maciej T.; Lundström, Karl; Winder, Monika; 2019. The necessity of a holistic approach when managing marine mammal–fisheries interactions: Environment and fisheries impact are stronger than seal predation. Ambio, 48552–564. 10.1007/s13280-018-1131-y 2019 Model application 19
Costalago, David; Bauer, Barbara; Tomczak, Maciej T.; Lundström, Karl; Winder, Monika; 2019. The necessity of a holistic approach when managing marine mammal–fisheries interactions: Environment and fisheries impact are stronger than seal predation. Ambio, 48552–564. 10.1007/s13280-018-1131-y 2019 Model application 19
Philippsen, Juliana Strieder; Minte-Vera, Carolina V.; Coll, Marta; Angelini, Ronaldo; 2019. Assessing fishing impacts in a tropical reservoir through an ecosystem modeling approach. Reviews in Fish Biology and Fisheries, 29125–146. 10.1007/s11160-018-9539-9 2019 Model application 13
Dahood, Adrian; Watters, George M.; de Mutsert, Kim; Cornwall, Christopher Edward; 2019. Using sea-ice to calibrate a dynamic trophic model for the Western Antarctic Peninsula. PLOS ONE, 14e0214814. 10.1371/journal.pone.0214814 2019 Model application 18
Philippsen, Juliana Strieder; Minte-Vera, Carolina V.; Coll, Marta; Angelini, Ronaldo; 2019. Assessing fishing impacts in a tropical reservoir through an ecosystem modeling approach. Reviews in Fish Biology and Fisheries, 29125–146. 10.1007/s11160-018-9539-9 2019 Model application 0
Calkiewicz, Joanna; Drgas, Aleksander; Smolinski, Szymon; Tomczak, Maciej; Margonski, Piotr; Muller-Karulis, Bärbel; Szymanek, Lena; 2019. Ecopath and Ecosim as tools in foodweb understanding - the Gulf of Gdansk example.. Frontiers in Marine Science, 6. 10.3389/conf.fmars.2019.08.00014 2019 Model application 1
Drgas, Aleksander; Całkiewicz, Joanna; 2019. Assessing the role of benthic filter feeders in in the food web of the Gulf of Gdansk (Sothern Baltic) – an Ecopath with Ecosim exercise. Frontiers in Marine Science, 6. 10.3389/conf.fmars.2019.08.00040 2019 Model application 0
Couce, Lorena; Christensen, Villy; Bilbao-Sieyro, Alberto; Perez, Yeray; Castro, Jose J.; 2019. Simulating trophic impacts of recreational fishing scenarios on two oceanic islands using Ecopath with Ecosim. Frontiers in Marine Science, 6. 10.3389/conf.fmars.2019.08.00054 2019 Model application 2
Zeng, Zeyu; Cheung, William W. L.; Li, Shiyu; Hu, Jiatang; Wang, Ying; 2019. Effects of climate change and fishing on the Pearl River Estuary ecosystem and fisheries. Reviews in Fish Biology and Fisheries, 29861–875. 10.1007/s11160-019-09574-y 2019 Model application 8
Lee, Sung Il; Zhang, Chang Ik; 2018. Evaluation of the Effect of Marine Ranching Activities on the Tongyeong Marine Ecosystem. Ocean Science Journal, 53557–582. 10.1007/s12601-018-0045-8 2018 Model application 23
de Haast, James A.; Treasure, Anne M.; Ruzicka, James J.; Moloney, Coleen L.; 2018. A donor-driven approach to modelling anchovy-sardine dominance shifts in the southern Benguela ecosystem. Journal of Marine Systems, 188117–132. 10.1016/j.jmarsys.2017.09.001 2018 Model application 2
Furtado, Miguel; 2018. Finally, a Global Synthesis on Marine Fisheries: Book Reviews. Conservation Biology, 321478–1479. 10.1111/cobi.13204 2018 Model application 0
Surma, Szymon; Pitcher, Tony J.; Kumar, Rajeev; Varkey, Divya; Pakhomov, Evgeny A.; Lam, Mimi E.; Belgrano, Andrea; 2018. Herring supports Northeast Pacific predators and fisheries: Insights from ecosystem modelling and management strategy evaluation. PLOS ONE, 13e0196307. 10.1371/journal.pone.0196307 2018 Model application 25
Ortiz, Marco; 2018. Robustness of macroscopic-systemic network indices after disturbances on diet-community matrices. Ecological Indicators, 95509–517. 10.1016/j.ecolind.2018.07.043 2018 Model application 7
Armada, Nygiel B.; Bacalso, Regina Therese M.; Rosales, Rina Maria P.; Lazarte, Alfredo T.; 2018. Right-sizing as a strategy for allocating fishing effort in a defined marine ecosystem: A Philippines case study. Ocean & Coastal Management, 165167–184. 10.1016/j.ocecoaman.2018.08.018 2018 Model application 6
Moutopoulos, Dimitrios K.; Stoumboudi, Maria Th.; Ramfos, Alexis; Tsagarakis, Konstantinos; Gritzalis, Konstantinos C.; Petriki, Olga; Patsia, Athina; Barbieri, Roberta; Machias, Athanasios; Stergiou, Konstantinos I.; Bobori, Dimitra C.; 2018. Food web modelling on the structure and functioning of a Mediterranean lentic system. Hydrobiologia, 822259–283. 10.1007/s10750-018-3685-x 2018 Model application 7
Adedeji, Oludare Hakeem; Elegbede, Isa Olalekan; 2018. Mapping and Modeling Ecosystem Services in Petroleum-Producing Areas in Nigeria. , 159–175. [5] 2018 Model application 2
Tan, Barron Cedric; Anticamara, Jonathan; Villanueva, Maria Ching; 2018. Modeling of degraded reefs in Leyte Gulf, Philippines in the face of climate change and human-induced disturbances. Climate, Disaster and Development Journal, 1–12. 10.18783/cddj.v003.i01.a01 2018 Model application 5
Zhao, Junjie; Bai, Jing; Zhang, Lu; Wang, Ning; Shou, Youping; 2018. Study on the ecosystem construction of using ecopath model in inland waterway. IOP Conference Series: Earth and Environmental Science, 133012026. 10.1088/1755-1315/133/1/012026 2018 Model application 0
Walters, William J.; Christensen, Villy; 2018. Ecotracer: analyzing concentration of contaminants and radioisotopes in an aquatic spatial-dynamic food web model. Journal of Environmental Radioactivity, 181118–127. 10.1016/j.jenvrad.2017.11.008 2018 Model application 25
Bumbeer, Janaína; da Rocha, Rosana Moreira; Bornatowski, Hugo; Robert, Maurício de Castro; Ainsworth, Cameron; 2018. Predicting impacts of lionfish (Pterois volitans) invasion in a coastal ecosystem of southern Brazil. Biological Invasions, 201257–1274. 10.1007/s10530-017-1625-8 2018 Model application 1
Bumbeer, Janaína; da Rocha, Rosana Moreira; Bornatowski, Hugo; Robert, Maurício de Castro; Ainsworth, Cameron; 2018. Predicting impacts of lionfish (Pterois volitans) invasion in a coastal ecosystem of southern Brazil. Biological Invasions, 201257–1274. 10.1007/s10530-017-1625-8 2018 Model application 15
Shabtay, Ateret; Portman, Michelle E.; Ofir, Eyal; Carmel, Yohay; Gal, Gideon; 2018. Using ecological modelling in marine spatial planning to enhance ecosystem-based management. Marine Policy, 9514–23. 10.1016/j.marpol.2018.06.018 2018 Model application 14
Zhao, Changsen; Zhang, Yuan; Yang, Shengtian; Xiang, Hua; Sun, Ying; Yang, Zengyuan; Yu, Qiang; Lim, Richard P.; 2018. Quantifying effects of hydrological and water quality disturbances on fish with food-web modeling. Journal of Hydrology, 5601–10. 10.1016/j.jhydrol.2018.03.017 2018 Model application 11
Han, Dongyan; Chen, Yong; Zhang, Chongliang; Ren, Yiping; Xu, Binduo; Xue, Ying; 2018. Evaluation of effects of shellfish aquaculture and capture fishery on a semi-closed bay ecosystem. Estuarine, Coastal and Shelf Science, 207175–182. 10.1016/j.ecss.2018.04.005 2018 Model application 15
Cremona, Fabien; Järvalt, Ain; Bhele, Upendra; Timm, Henn; Seller, Siim; Haberman, Juta; Zingel, Priit; Agasild, Helen; Nõges, Peeter; Nõges, Tiina; 2018. Relationships between fisheries, foodweb structure, and detrital pathway in a large shallow lake. Hydrobiologia, 820145–163. 10.1007/s10750-018-3648-2 2018 Model application 1
Bornatowski, Hugo; Angelini, Ronaldo; Coll, Marta; Barreto, Rodrigo R. P.; Amorim, Alberto F.; 2018. Ecological role and historical trends of large pelagic predators in a subtropical marine ecosystem of the South Atlantic. Reviews in Fish Biology and Fisheries, 28241–259. 10.1007/s11160-017-9492-z 2018 Model application 39
Steenbeek, Jeroen; 2018. EwE​ ​model​ ​guidelines​ ​for​ ​MSP​ ​game play. , 222738 Bytes. 10.6084/M9.FIGSHARE.5897185.V1 2018 Model application 0
Cremona, Fabien; Järvalt, Ain; Bhele, Upendra; Timm, Henn; Seller, Siim; Haberman, Juta; Zingel, Priit; Agasild, Helen; Nõges, Peeter; Nõges, Tiina; 2018. Relationships between fisheries, foodweb structure, and detrital pathway in a large shallow lake. Hydrobiologia, 820145–163. 10.1007/s10750-018-3648-2 2018 Model application 17
Moutopoulos, Dimitrios K.; Stoumboudi, Maria Th.; Ramfos, Alexis; Tsagarakis, Konstantinos; Gritzalis, Konstantinos C.; Petriki, Olga; Patsia, Athina; Barbieri, Roberta; Machias, Athanasios; Stergiou, Konstantinos I.; Bobori, Dimitra C.; 2018. Food web modelling on the structure and functioning of a Mediterranean lentic system. Hydrobiologia, 822259–283. 10.1007/s10750-018-3685-x 2018 Model application 1
Fulton, E.A.; Bulman, C.M.; Pethybridge, H.; Goldsworthy, S.D.; 2018. Modelling the Great Australian Bight Ecosystem. Deep Sea Research Part II: Topical Studies in Oceanography, 157211–235. 10.1016/j.dsr2.2018.11.002 2018 Model application 15
Pedersen, T; Fuhrmann, Mm; Lindstrøm, U; Nilssen, Em; Ivarjord, T; Ramasco, V; Jørgensen, Ll; Sundet, Jh; Sivertsen, K; Källgren, E; Hjelset, Am; Michaelsen, C; Systad, G; Norrbin, F; Svenning, Ma; Bjørge, A; Steen, H; Nilssen, Kt; 2018. Effects of the invasive red king crab on food web structure and ecosystem properties in an Atlantic fjord. Marine Ecology Progress Series, 59613–31. 10.3354/meps12548 2018 Model application 20
Kao, Yu-Chun; Rogers, Mark W.; Bunnell, David B.; 2018. Evaluating Stocking Efficacy in an Ecosystem Undergoing Oligotrophication. Ecosystems, 21600–618. 10.1007/s10021-017-0173-5 2018 Model application 0
Lercari, Diego; Defeo, Omar; Ortega, Leonardo; Orlando, Luis; Gianelli, Ignacio; Celentano, Eleonora; 2018. Long-term structural and functional changes driven by climate variability and fishery regimes in a sandy beach ecosystem. Ecological Modelling, 36841–51. 10.1016/j.ecolmodel.2017.11.007 2018 Model application 21
Bornatowski, Hugo; Angelini, Ronaldo; Coll, Marta; Barreto, Rodrigo R. P.; Amorim, Alberto F.; 2018. Ecological role and historical trends of large pelagic predators in a subtropical marine ecosystem of the South Atlantic. Reviews in Fish Biology and Fisheries, 28241–259. 10.1007/s11160-017-9492-z 2018 Model application 39
Kumari, Rekha; 2018. SUMMING UP WATER CHARACTERISTICS WITH SOFTWARE-ANALYSED TROPHIC INTERRELATIONS IN A POND.. International Journal of Advanced Research, 6952–955. 10.21474/IJAR01/8221 2018 Model application 3
Li, C; Wang, Q; Ye, S; Huang, G; Liu, J; Li, Z; 2018. Modeling trophic structure and energy flows in a shallow lake, Yangtze River Basin, China: a case analysis for culture-based fishery practices. Aquaculture Environment Interactions, 10213–226. 10.3354/aei00257 2018 Model application 6
Türkoğlu, Muhammet; Önal, Umur; Ismen, Ali; Webber, Mona K.; Webber, Dale F.; Ford, Gale Persad; 2018. Plankton Ecology and Productivity in Jamaican Waters with New and Unique Applications. , . [6] 2018 Model application 1
Feng, Jie; Tian, Xiang-Li; Dong, Shuang-Lin; He, Rui-Peng; Zhang, Kai; Zhang, Dong-Xu; Li, Li; Zhang, Qing-Qi; Zhang, Tao; 2018. Comparative analysis of the energy fluxes and trophic structure of polyculture ecosystems of Portunus trituberculatus based on Ecopath model. Aquaculture, 496185–196. 10.1016/j.aquaculture.2018.07.020 2018 Model application 19
Tierney, Kieran M.; Heymans, Johanna J.; Muir, Graham K.P.; Cook, Gordon T.; Buszowski, Joe; Steenbeek, Jeroen; Walters, William J.; Christensen, Villy; MacKinnon, Gillian; Howe, John A.; Xu, Sheng; 2018. Modelling marine trophic transfer of radiocarbon (14C) from a nuclear facility. Environmental Modelling & Software, 102138–154. 10.1016/j.envsoft.2018.01.013 2018 Model application 13
Kao, Yu-Chun; Rogers, Mark W.; Bunnell, David B.; 2018. Evaluating Stocking Efficacy in an Ecosystem Undergoing Oligotrophication. Ecosystems, 21600–618. 10.1007/s10021-017-0173-5 2018 Model application 18
Steenbeek, Jeroen; Corrales, Xavier; Platts, Mark; Coll, Marta; 2018. Ecosampler: A new approach to assessing parameter uncertainty in Ecopath with Ecosim. SoftwareX, 7198–204. 10.1016/j.softx.2018.06.004 2018 Model application 60
Sharma, Sahadev; Simon, Ngomba Longonje; 2018. Cameroon Mangrove Forest Ecosystem: Ecological and Environmental Dimensions. , . [7] 2018 Model application 1
Angelini, Ronaldo; Contente, Riguel F.; Rossi-Wongtschowski, Carmem L.D.B.; Soares, Lucy S.H.; Schaeffer-Novelli, Yara; Lopes, Rubens M.; Mancini, Patrícia L.; Coll, Marta; Amaral, Antonia C.Z.; 2018. Ecosystem modeling as a framework to convert a multi-disciplinary research approach into a useful model for the Araçá Bay (Brazil). Ocean & Coastal Management, 16492–103. 10.1016/j.ocecoaman.2018.02.007 2018 Model application 14
Vasslides, James M.; de Mutsert, Kim; Christensen, Villy; Townsend, Howard; 2017. Using the Ecopath with Ecosim Modeling Approach to Understand the Effects of Watershed-based Management Actions in Coastal Ecosystems. Coastal Management, 4544–55. 10.1080/08920753.2017.1237241 2017 Model application 14
A. Kearney, Kelly; 2017. ecopath_matlab: A Matlab-based implementation of the Ecopath food web algorithm. The Journal of Open Source Software, 264. 10.21105/joss.00064 2017 Model application 12
Bentley, Jacob W.; Serpetti, Natalia; Heymans, Johanna Jacomina; 2017. Investigating the potential impacts of ocean warming on the Norwegian and Barents Seas ecosystem using a time-dynamic food-web model. Ecological Modelling, 36094–107. 10.1016/j.ecolmodel.2017.07.002 2017 Model application 42
Hossain, Monir; Stewart, Thomas J.; Arhonditsis, George B.; van Oevelen, Dick; Minns, Charles K.; Koops, Marten A.; 2017. Uncertainty assessment of trophic flows in Hamilton Harbour: A linear inverse modelling analysis. Aquatic Ecosystem Health & Management, 20265–277. 10.1080/14634988.2017.1342517 2017 Model application 1
Moullec, Fabien; Gascuel, Didier; Bentorcha, Karim; Guénette, Sylvie; 2017. Trophic models: What do we learn about Celtic Sea and Bay of Biscay ecosystems?. Journal of Marine Systems, 172104–117. 10.1016/j.jmarsys.2017.03.008 2017 Model application 32
Musinguzi, Laban; Natugonza, Vianny; Ogutu-Ohwayo, Richard; 2017. Paradigm shifts required to promote ecosystem modeling for ecosystem-based fishery management for African inland lakes. Journal of Great Lakes Research, 431–8. 10.1016/j.jglr.2016.11.007 2017 Model application 15
de Araújo, Júlio Neves; 2017. SIMULAÇÃO DA EXPLORAÇÃO DE RECURSOS NATURAIS DO ECOSSISTEMA DA BACIA DE CAMPOS (RJ) UTILIZANDO UM MODELO ECOPATH WITH ECOSIM Araújo, J.N. 2017. Simulação da exploração de recursos naturais do ecossistema da Bacia de Campos (RJ) utilizando um modelo Ecopath with Ecosim. In: Angelini, R., Araújo, J.N., Falcão, A.P.C., editores. Modelagem Ecossistêmica para integração e manejo na Bacia de Campos (Atlântico Sudoeste). Rio de Janeiro: Elsevier. Habitats, v. 8. p. 189-203.. , 189–203. [8] 2017 Model application 0
Robson, Barbara J.; Lester, Rebecca E.; Baldwin, Darren S.; Bond, Nicholas R.; Drouart, Romain; Rolls, Robert J.; Ryder, Darren S.; Thompson, Ross M.; 2017. Modelling food-web mediated effects of hydrological variability and environmental flows. Water Research, 124108–128. 10.1016/j.watres.2017.07.031 2017 Model application 26
D. (Daniel), Pauly; Weingartner, Gunna; 2017. Use of Ecopath with Ecosim to Evaluate Strategies for Sustainable Exploitation of Multi-Species Resources. , . 10.14288/1.0348095 2017 Model application 25
Buchanan, Gary A.; Belton, Thomas J.; Paudel, Bhanu; 2017. The Comprehensive Barnegat Bay Research Program. Journal of Coastal Research, 781–6. 10.2112/SI78-001.1 2017 Model application 1
de Mutsert, Kim; Lewis, Kristy; Milroy, Scott; Buszowski, Joe; Steenbeek, Jeroen; 2017. Using ecosystem modeling to evaluate trade-offs in coastal management: Effects of large-scale river diversions on fish and fisheries. Ecological Modelling, 36014–26. 10.1016/j.ecolmodel.2017.06.029 2017 Model application 48
Sakamoto, Ayaka; Shirakihara, Kunio; 2017. Ecosystem dynamics in Tokyo Bay with a focus on high trophic levels using Ecopath with Ecosim. Journal of Marine Science and Technology, 221–10. 10.1007/s00773-016-0388-8 2017 Model application 7
Sagarese, Skyler R.; Lauretta, Matthew V.; Walter, John F.; 2017. Progress towards a next-generation fisheries ecosystem model for the northern Gulf of Mexico. Ecological Modelling, 34575–98. 10.1016/j.ecolmodel.2016.11.001 2017 Model application 28
Justic, Dubravko; Rose, Kenneth A.; Hetland, Robert D.; Fennel, Katja; de Mutsert, Kim; Steenbeek, Jeroen; Cowan, James H.; Christensen, Villy; 2017. Using Ecosystem Modeling to Determine Hypoxia Effects on Fish and Fisheries. , 377–400. [9] 2017 Model application 1
Bentorcha, Abdelkrim; Gascuel, Didier; Guénette, Sylvie; 2017. Using trophic models to assess the impact of fishing in the Bay of Biscay and the Celtic Sea. Aquatic Living Resources, 307. 10.1051/alr/2017006 2017 Model application 17
Kumar, Rajeev; Surma, Szymon; Pitcher, Tony J.; Varkey, Divya; Lam, Mimi E.; Ainsworth, Cameron H.; Pakhomov, Evgeny; 2017. An Ecosystem Model of the Ocean Around Haida Gwaii, Northern British Columbia : Ecopath, Ecosim and Ecospace. , . 10.14288/1.0354480 2017 Model application 5
Suprenand, Pm; Ainsworth, Ch; 2017. Trophodynamic effects of climate change-induced alterations to primary production along the western Antarctic Peninsula. Marine Ecology Progress Series, 56937–54. 10.3354/meps12100 2017 Model application 30
Ofir, E.; Heymans, J.J.; Shapiro, J.; Goren, M.; Spanier, E.; Gal, G.; 2017. Predicting the impact of Lake Biomanipulation based on food-web modeling—Lake Kinneret as a case study. Ecological Modelling, 34814–24. 10.1016/j.ecolmodel.2016.12.019 2017 Model application 17
Castellanos-Galindo, Gustavo A.; Cantera, Jaime; Valencia, Natasha; Giraldo, Sebastian; Peña, Enrique; Kluger, Lotta C.; Wolff, Matthias; 2017. Modeling trophic flows in the wettest mangroves of the world: the case of Bahía Málaga in the Colombian Pacific coast. Hydrobiologia, 80313–27. 10.1007/s10750-017-3300-6 2017 Model application 21
Raoux, Aurore; Tecchio, Samuele; Pezy, Jean-Philippe; Lassalle, Géraldine; Degraer, Steven; Wilhelmsson, Dan; Cachera, Marie; Ernande, Bruno; Le Guen, Camille; Haraldsson, Matilda; Grangeré, Karine; Le Loc’h, François; Dauvin, Jean-Claude; Niquil, Nathalie; 2017. Benthic and fish aggregation inside an offshore wind farm: Which effects on the trophic web functioning?. Ecological Indicators, 7233–46. 10.1016/j.ecolind.2016.07.037 2017 Model application 111
Kumar, Rajeev; Pitcher, Tony J.; Varkey, Divya A.; Belgrano, Andrea; 2017. Ecosystem approach to fisheries: Exploring environmental and trophic effects on Maximum Sustainable Yield (MSY) reference point estimates. PLOS ONE, 12e0185575. 10.1371/journal.pone.0185575 2017 Model application 4
Preikshot, David; Beattie, Alasdair; 2017. Fishing for answers : ecosystem dynamics, trophic shifts, and salmonid population changes in South Puget Sound, WA, 1970-1999. , . 10.14288/1.0348149 2017 Model application 0
Okey, Thomas A.; D. (Daniel), Pauly; 2017. Trophic Mass-Balance Model of Alaska’s Prince William Sound Ecosystem, for the Post-Spill Period 1994-1996 : 2nd Edition. , . 10.14288/1.0354483 2017 Model application 86
Pitcher, Tony J.; Cochrane, K. L.; 2017. The Use of Ecosystem Models to Investigate Multispecies Management Strategies for Capture Fisheries. , . 10.14288/1.0348151 2017 Model application 92
Guénette, Sylvie; Christensen, Villy; D. (Daniel), Pauly; 2017. Fisheries Impacts on North Atlantic Ecosystems : Models and Analyses. , . 10.14288/1.0348145 2017 Model application 96
McGill, Lillian M.; Gerig, Brandon S.; Chaloner, Dominic T.; Lamberti, Gary A.; 2017. An ecosystem model for evaluating the effects of introduced Pacific salmon on contaminant burdens of stream-resident fish. Ecological Modelling, 35539–48. 10.1016/j.ecolmodel.2017.03.027 2017 Model application 14
Vasslides, James M.; Jensen, Olaf P.; 2017. Quantitative vs . Semiquantitative Ecosystem Models: Comparing Alternate Representations of an Estuarine Ecosystem. Journal of Coastal Research, 78287–296. 10.2112/SI78-020.1 2017 Model application 9
Colléter, Mathieu; Valls, Audrey Emilie; Guitton, Jérôme; Morissette, Lyne; Arreguín-Sánchez, Francisco Francisco; Christensen, Villy; D. (Didier), Gascuel; D. (Daniel), Pauly; 2017. EcoBase : A Repository Solution to Gather and Communicate Information from EwE Models. , . 10.14288/1.0354309 2017 Model application 40
Han, Dongyan; Chen, Yong; Zhang, Chongliang; Ren, Yiping; Xue, Ying; Wan, Rong; 2017. Evaluating impacts of intensive shellfish aquaculture on a semi-closed marine ecosystem. Ecological Modelling, 359193–200. 10.1016/j.ecolmodel.2017.05.024 2017 Model application 23
Buchheister, Andre; Miller, Thomas J.; Houde, Edward D.; 2017. Evaluating Ecosystem-Based Reference Points for Atlantic Menhaden. Marine and Coastal Fisheries, 9457–478. 10.1080/19425120.2017.1360420 2017 Model application 37
Sakamoto, Ayaka; Shirakihara, Kunio; 2017. Ecosystem dynamics in Tokyo Bay with a focus on high trophic levels using Ecopath with Ecosim. Journal of Marine Science and Technology, 221–10. 10.1007/s00773-016-0388-8 2017 Model application 0
Coll, M.; Steenbeek, J.; 2017. Standardized ecological indicators to assess aquatic food webs: The ECOIND software plug-in for Ecopath with Ecosim models. Environmental Modelling & Software, 89120–130. 10.1016/j.envsoft.2016.12.004 2017 Model application 50
Castellanos-Galindo, Gustavo A.; Cantera, Jaime; Valencia, Natasha; Giraldo, Sebastian; Peña, Enrique; Kluger, Lotta C.; Wolff, Matthias; 2017. Modeling trophic flows in the wettest mangroves of the world: the case of Bahía Málaga in the Colombian Pacific coast. Hydrobiologia, 80313–27. 10.1007/s10750-017-3300-6 2017 Model application 0
Han, Dongyan; Xue, Ying; Zhang, Chongliang; Ren, Yiping; 2017. A mass balanced model of trophic structure and energy flows of a semi-closed marine ecosystem. Acta Oceanologica Sinica, 3660–69. 10.1007/s13131-017-1071-6 2017 Model application 16
Su, Meng; 2016. Preliminary analysis of the Jimo coastal ecosystem with the ecopath model. Journal of Ocean University of China, 151059–1066. 10.1007/s11802-016-3078-6 2016 Model application 6
Natugonza, Vianny; Ogutu-Ohwayo, Richard; Musinguzi, Laban; Kashindye, Benedicto; Jónsson, Steingrímur; Valtysson, Hreidar Thor; 2016. Exploring the structural and functional properties of the Lake Victoria food web, and the role of fisheries, using a mass balance model. Ecological Modelling, 342161–174. 10.1016/j.ecolmodel.2016.10.002 2016 Model application 22
Han, Rui; Chen, Qiuwen; Wang, Li; Tang, Xinwu; 2016. Preliminary investigation on the changes in trophic structure and energy flow in the Yangtze estuary and adjacent coastal ecosystem due to the Three Gorges Reservoir. Ecological Informatics, 36152–161. 10.1016/j.ecoinf.2016.03.002 2016 Model application 9
Beecham, Jonathan; Bruggeman, Jorn; Aldridge, John; Mackinson, Steven; 2016. <i>Couplerlib</i>: a metadata-driven library for the integration of multiple models of higher and lower trophic level marine systems with inexact functional group matching. Geoscientific Model Development, 9947–964. 10.5194/gmd-9-947-2016 2016 Model application 3
Giacaman-Smith, José; Neira, Sergio; Arancibia, Hugo; 2016. Community structure and trophic interactions in a coastal management and exploitation area for benthic resources in central Chile. Ocean & Coastal Management, 119155–163. 10.1016/j.ocecoaman.2015.10.003 2016 Model application 10
Kao, Yu-Chun; Adlerstein, Sara A.; Rutherford, Edward S.; 2016. Assessment of Top-Down and Bottom-Up Controls on the Collapse of Alewives (Alosa pseudoharengus) in Lake Huron. Ecosystems, 19803–831. 10.1007/s10021-016-9969-y 2016 Model application 4
Ocampo Reinaldo, Matías; Milessi, Andrés C.; Romero, María Alejandra; Crespo, Enrique; Wolff, Matthias; González, Raúl A.; 2016. Assessing the effects of demersal fishing and conservation strategies of marine mammals over a Patagonian food web. Ecological Modelling, 33131–43. 10.1016/j.ecolmodel.2015.10.025 2016 Model application 12
Alexander, Karen A.; Meyjes, Sophie A.; Heymans, Johanna J.; 2016. Spatial ecosystem modelling of marine renewable energy installations: Gauging the utility of Ecospace. Ecological Modelling, 331115–128. 10.1016/j.ecolmodel.2016.01.016 2016 Model application 31
Heymans, Johanna J.; Tomczak, Maciej T.; 2016. Regime shifts in the Northern Benguela ecosystem: Challenges for management. Ecological Modelling, 331151–159. 10.1016/j.ecolmodel.2015.10.027 2016 Model application 47
Wang, Ying; Hu, Jianfeng; Pan, Haoran; Li, Shiyu; Failler, Pierre; 2016. An integrated model for marine fishery management in the Pearl River Estuary: Linking socio-economic systems and ecosystems. Marine Policy, 64135–147. 10.1016/j.marpol.2015.11.014 2016 Model application 24
González, Jorge; Ortiz, Marco; Rodríguez-Zaragoza, Fabián; Ulanowicz, Robert E.; 2016. Assessment of long-term changes of ecosystem indexes in Tongoy Bay (SE Pacific coast): Based on trophic network analysis. Ecological Indicators, 69390–399. 10.1016/j.ecolind.2016.04.019 2016 Model application 35
Banerjee, Arnab; Banerjee, Moitreyee; Mukherjee, Joyita; Rakshit, Nabyendu; Ray, Santanu; 2016. Trophic relationships and ecosystem functioning of Bakreswar Reservoir, India. Ecological Informatics, 3650–60. 10.1016/j.ecoinf.2016.09.006 2016 Model application 30
Rodríguez-Zaragoza, F.A.; Ortiz, M.; Berrios, F.; Campos, L.; de Jesús-Navarrete, A.; Castro-Pérez, J.; Hernández-Flores, A.; García-Rivas, M.; Fonseca-Peralta, F.; Gallegos-Aguilar, E.; 2016. Trophic models and short-term dynamic simulations for benthic-pelagic communities at Banco Chinchorro Biosphere Reserve (Mexican Caribbean): a conservation case. Community Ecology, 1748–60. 10.1556/168.2016.17.1.7 2016 Model application 20
Villasante, S.; Arreguín-Sánchez, F.; Heymans, J.J.; Libralato, S.; Piroddi, C.; Christensen, V.; Coll, M.; 2016. Modelling marine ecosystems using the Ecopath with Ecosim food web approach: New insights to address complex dynamics after 30 years of developments. Ecological Modelling, 3311–4. 10.1016/j.ecolmodel.2016.04.017 2016 Model application 29
Kluger, Lc; Taylor, Mh; Barriga Rivera, E; Torres Silva, E; Wolff, M; 2016. Assessing the ecosystem impact of scallop bottom culture through a community analysis and trophic modelling approach. Marine Ecology Progress Series, 547121–135. 10.3354/meps11652 2016 Model application 22
Zhang, Hongyan; Rutherford, Edward S.; Mason, Doran M.; Breck, Jason T.; Wittmann, Marion E.; Cooke, Roger M.; Lodge, David M.; Rothlisberger, John D.; Zhu, Xinhua; Johnson, Timothy B.; 2016. Forecasting the Impacts of Silver and Bighead Carp on the Lake Erie Food Web. Transactions of the American Fisheries Society, 145136–162. 10.1080/00028487.2015.1069211 2016 Model application 64
Kumar, Rajeev; Varkey, Divya; Pitcher, Tony; 2016. Simulation of zebra mussels (Dreissena polymorpha) invasion and evaluation of impacts on Mille Lacs Lake, Minnesota: An ecosystem model. Ecological Modelling, 33168–76. 10.1016/j.ecolmodel.2016.01.019 2016 Model application 25
Bacalso, Regina Therese M.; Wolff, Matthias; Rosales, Rina Maria; Armada, Nygiel B.; 2016. Effort reallocation of illegal fishing operations: A profitable scenario for the municipal fisheries of Danajon Bank, Central Philippines. Ecological Modelling, 3315–16. 10.1016/j.ecolmodel.2016.01.015 2016 Model application 19
Chea, Ratha; Guo, Chuanbo; Grenouillet, Gaël; Lek, Sovan; 2016. Toward an ecological understanding of a flood-pulse system lake in a tropical ecosystem: Food web structure and ecosystem health. Ecological Modelling, 3231–11. 10.1016/j.ecolmodel.2015.11.014 2016 Model application 35
Coll, Marta; Steenbeek, Jeroen; Sole, Jordi; Palomera, Isabel; Christensen, Villy; 2016. Modelling the cumulative spatial–temporal effects of environmental drivers and fishing in a NW Mediterranean marine ecosystem. Ecological Modelling, 331100–114. 10.1016/j.ecolmodel.2016.03.020 2016 Model application 58
Kao, Yu-Chun; Adlerstein, Sara A.; Rutherford, Edward S.; 2016. Assessment of Top-Down and Bottom-Up Controls on the Collapse of Alewives (Alosa pseudoharengus) in Lake Huron. Ecosystems, 19803–831. 10.1007/s10021-016-9969-y 2016 Model application 43
Jacobsen, Nis S.; Essington, Timothy E.; Andersen, Ken H.; Shuter, Brian; 2016. Comparing model predictions for ecosystem-based management. Canadian Journal of Fisheries and Aquatic Sciences, 73666–676. 10.1139/cjfas-2014-0561 2016 Model application 23
Abascal-Monroy, Isaura Michelle; Zetina-Rejón, Manuel J.; Escobar-Toledo, Fabián; López-Ibarra, Gladis A.; Sosa-López, Atahualpa; Tripp-Valdez, Arturo; 2016. Functional and Structural Food Web Comparison of Terminos Lagoon, Mexico in Three Periods (1980, 1998, and 2011). Estuaries and Coasts, 391282–1293. 10.1007/s12237-015-0054-0 2016 Model application 23
de Mutsert, Kim; Steenbeek, Jeroen; Lewis, Kristy; Buszowski, Joe; Cowan, James H.; Christensen, Villy; 2016. Exploring effects of hypoxia on fish and fisheries in the northern Gulf of Mexico using a dynamic spatially explicit ecosystem model. Ecological Modelling, 331142–150. 10.1016/j.ecolmodel.2015.10.013 2016 Model application 70
Wu, Zhongxin; Zhang, Xiumei; Lozano-Montes, Hector M.; Loneragan, Neil R.; 2016. Trophic flows, kelp culture and fisheries in the marine ecosystem of an artificial reef zone in the Yellow Sea. Estuarine, Coastal and Shelf Science, 18286–97. 10.1016/j.ecss.2016.08.021 2016 Model application 38
Heymans, Johanna Jacomina; Coll, Marta; Link, Jason S.; Mackinson, Steven; Steenbeek, Jeroen; Walters, Carl; Christensen, Villy; 2016. Best practice in Ecopath with Ecosim food-web models for ecosystem-based management. Ecological Modelling, 331173–184. 10.1016/j.ecolmodel.2015.12.007 2016 Model application 390
Tesfamichael, Dawit; Pauly, Daniel; 2016. An Exploration of Ecosystem-Based Approaches for the Management of Red Sea Fisheries. , 7111–134. [10] 2016 Model application 5
Steenbeek, Jeroen; Buszowski, Joe; Christensen, Villy; Akoglu, Ekin; Aydin, Kerim; Ellis, Nick; Felinto, Dalai; Guitton, Jerome; Lucey, Sean; Kearney, Kelly; Mackinson, Steven; Pan, Mike; Platts, Mark; Walters, Carl; 2016. Ecopath with Ecosim as a model-building toolbox: Source code capabilities, extensions, and variations. Ecological Modelling, 319178–189. 10.1016/j.ecolmodel.2015.06.031 2016 Model overview 61
Bourdaud, Pierre; Gascuel, Didier; Bentorcha, Abdelkrim; Brind’Amour, Anik; 2016. New trophic indicators and target values for an ecosystem-based management of fisheries. Ecological Indicators, 61588–601. 10.1016/j.ecolind.2015.10.010 2016 Model application 43
Ruiz, Diego J.; Banks, Stuart; Wolff, Matthias; 2016. Elucidating fishing effects in a large-predator dominated system: The case of Darwin and Wolf Islands (Galápagos). Journal of Sea Research, 1071–11. 10.1016/j.seares.2015.11.001 2016 Model application 21
Geers, T.M.; Pikitch, E.K.; Frisk, M.G.; 2016. An original model of the northern Gulf of Mexico using Ecopath with Ecosim and its implications for the effects of fishing on ecosystem structure and maturity. Deep Sea Research Part II: Topical Studies in Oceanography, 129319–331. 10.1016/j.dsr2.2014.01.009 2016 Model application 58
Scott, Erin; Serpetti, Natalia; Steenbeek, Jeroen; Heymans, Johanna Jacomina; 2016. A Stepwise Fitting Procedure for automated fitting of Ecopath with Ecosim models. SoftwareX, 525–30. 10.1016/j.softx.2016.02.002 2016 Model overview 60
Lewis, K.A.; de Mutsert, K.; Steenbeek, J.; Peele, H.; Cowan, J.H.; Buszowski, J.; 2016. Employing ecosystem models and geographic information systems (GIS) to investigate the response of changing marsh edge on historical biomass of estuarine nekton in Barataria Bay, Louisiana, USA. Ecological Modelling, 331129–141. 10.1016/j.ecolmodel.2016.01.017 2016 Model application 21
Choy, Ca; Wabnitz, Ccc; Weijerman, M; Woodworth-Jefcoats, Pa; Polovina, Jj; 2016. Finding the way to the top: how the composition of oceanic mid-trophic micronekton groups determines apex predator biomass in the central North Pacific. Marine Ecology Progress Series, 5499–25. 10.3354/meps11680 2016 Model application 33
Colléter, M; Walters, Cj; Gatti, P; Gascuel, D; 2015. Including foraging arena and top-down controls improves the modeling of trophic flows and fishing impacts in aquatic food webs. Marine Ecology Progress Series, 53417–37. 10.3354/meps11357 2015 Model application 5
Ainsworth, C.H.; Walters, C.J.; 2015. Ten common mistakes made in Ecopath with Ecosim modelling. Ecological Modelling, 30814–17. 10.1016/j.ecolmodel.2015.03.019 2015 Model application 30
Tecchio, Samuele; Rius, Armonie Tous; Dauvin, Jean-Claude; Lobry, Jérémy; Lassalle, Géraldine; Morin, Jocelyne; Bacq, Nicolas; Cachera, Marie; Chaalali, Aurélie; Villanueva, Maria Ching; Niquil, Nathalie; 2015. The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis. Ecological Modelling, 31291–101. 10.1016/j.ecolmodel.2015.05.026 2015 Model application 44
Li, Lingbo; Pitcher, Tony J.; Devlin, Robert H.; 2015. Potential risks of trophic impacts by escaped transgenic salmon in marine environments. Environmental Conservation, 42152–161. 10.1017/S0376892914000319 2015 Model application 9
Cornwall, Christopher E.; Eddy, Tyler D.; 2015. Effects of near-future ocean acidification, fishing, and marine protection on a temperate coastal ecosystem: Ocean Acidification and Marine Reserves. Conservation Biology, 29207–215. 10.1111/cobi.12394 2015 Model application 27
Forrest, Robyn E.; Savina, Marie; Fulton, Elizabeth A.; Pitcher, Tony J.; 2015. Do marine ecosystem models give consistent policy evaluations? A comparison of Atlantis and Ecosim. Fisheries Research, 167293–312. 10.1016/j.fishres.2015.03.010 2015 Model application 37
Tecchio, Samuele; Coll, Marta; Sardà, Francisco; 2015. Structure, functioning, and cumulative stressors of Mediterranean deep-sea ecosystems. Progress in Oceanography, 135156–167. 10.1016/j.pocean.2015.05.018 2015 Model application 13
Arreguín-Sánchez, Francisco; del Monte-Luna, Pablo; Zetina-Rejón, Manuel J.; 2015. Climate Change Effects on Aquatic Ecosystems and the Challenge for Fishery Management: Pink Shrimp of the Southern Gulf of Mexico. Fisheries, 4015–19. 10.1080/03632415.2015.988075 2015 Model application 23
Chagaris, David D.; Mahmoudi, Behzad; Walters, Carl J.; Allen, Micheal S.; 2015. Simulating the Trophic Impacts of Fishery Policy Options on the West Florida Shelf Using Ecopath with Ecosim. Marine and Coastal Fisheries, 744–58. 10.1080/19425120.2014.966216 2015 Model application 43
Wang, Ying; Pan, Haoran; Li, Shiyu; Failler, Pierre; 2015. An Integrated Socio-Economic and Ecological Framework for Evaluating the Societal Costs and Benefits of Fishing Activities in the Pearl River Delta. Open Journal of Marine Science, 5477–497. 10.4236/ojms.2015.54038 2015 Model application 2
Zhou, Bo; Dong, Shuanglin; Wang, Fang; 2015. Trophic structure and energy fluxes in a grass carp (Ctenopharyngodon idellus) cultured pond ecosystem. Aquaculture International, 231313–1324. 10.1007/s10499-015-9886-7 2015 Model application 0
Webber, Mona; Persad, Gale; Harris, Nicole; Wilmot, Inilek; Webber, Dale; 2015. An ecological assessment of Foul and Folly Bays, Morant wetlands area, Jamaica using Ecopath with Ecosim. Ocean & Coastal Management, 105127–137. 10.1016/j.ocecoaman.2015.01.006 2015 Model application 9
Metcalfe, Kristian; Vaz, Sandrine; Engelhard, Georg H.; Villanueva, Maria Ching; Smith, Robert J.; Mackinson, Steven; Punt, Andre; 2015. Evaluating conservation and fisheries management strategies by linking spatial prioritization software and ecosystem and fisheries modelling tools. Journal of Applied Ecology, 52665–674. 10.1111/1365-2664.12404 2015 Model application 73
Ortiz, Marco; Berrios, Fernando; Campos, Leonardo; Uribe, Roberto; Ramirez, Alejandro; Hermosillo-Núñez, Brenda; González, Jorge; Rodriguez-Zaragoza, Fabián; 2015. Mass balanced trophic models and short-term dynamical simulations for benthic ecological systems of Mejillones and Antofagasta bays (SE Pacific): Comparative network structure and assessment of human impacts. Ecological Modelling, 309153–162. 10.1016/j.ecolmodel.2015.04.006 2015 Model application 41
Romagnoni, Giovanni; Mackinson, Steven; Hong, Jiang; Eikeset, Anne Maria; 2015. The Ecospace model applied to the North Sea: Evaluating spatial predictions with fish biomass and fishing effort data. Ecological Modelling, 30050–60. 10.1016/j.ecolmodel.2014.12.016 2015 Model application 32
Akoglu, E.; Libralato, S.; Salihoglu, B.; Oguz, T.; Solidoro, C.; 2015. EwE-F 1.0: an implementation of Ecopath with Ecosim in Fortran 95/2003 for coupling and integration with other models. Geoscientific Model Development, 82687–2699. 10.5194/gmd-8-2687-2015 2015 Model overview 10
Zhou, Bo; Dong, Shuanglin; Wang, Fang; 2015. Trophic structure and energy fluxes in a grass carp (Ctenopharyngodon idellus) cultured pond ecosystem. Aquaculture International, 231313–1324. 10.1007/s10499-015-9886-7 2015 Model application 10
Colléter, Mathieu; Valls, Audrey; Guitton, Jérôme; Gascuel, Didier; Pauly, Daniel; Christensen, Villy; 2015. Global overview of the applications of the Ecopath with Ecosim modeling approach using the EcoBase models repository. Ecological Modelling, 30242–53. 10.1016/j.ecolmodel.2015.01.025 2015 Model application 221
Gartner, Adam; Lavery, Paul S.; Lonzano-Montes, Hector; 2015. Trophic implications and faunal resilience following one-off and successive disturbances to an Amphibolis griffithii seagrass system. Marine Pollution Bulletin, 94131–143. 10.1016/j.marpolbul.2015.03.001 2015 Model application 10
McGregor, Andrea M.; Davis, Christopher L.; Walters, Carl J.; Foote, Lee; 2015. Fisheries restoration potential for a large lake ecosystem: using ecosystem models to examine dynamic relationships between walleye, cormorant, and perch. Ecology and Society, 20art29. 10.5751/ES-07350-200229 2015 Model application 3
Guesnet, Vanessa; Lassalle, Géraldine; Chaalali, Aurélie; Kearney, Kelly; Saint-Béat, Blanche; Karimi, Battle; Grami, Boutheina; Tecchio, Samuele; Niquil, Nathalie; Lobry, Jérémy; 2015. Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators. Ecological Modelling, 31329–40. 10.1016/j.ecolmodel.2015.05.036 2015 Model application 47
Chen, Zuozhi; Xu, Shannan; Qiu, Yongsong; 2015. Using a food-web model to assess the trophic structure and energy flows in Daya Bay, China. Continental Shelf Research, 111316–326. 10.1016/j.csr.2015.08.013 2015 Model application 26
Wang, Ying; Duan, Lijie; Li, Shiyu; Zeng, Zeyu; Failler, Pierre; 2015. Modeling the effect of the seasonal fishing moratorium on the Pearl River Estuary using ecosystem simulation. Ecological Modelling, 312406–416. 10.1016/j.ecolmodel.2015.06.011 2015 Model application 24
Smith, Md; Fulton, Ea; Day, Rw; Shannon, Lj; Shin, Y-J; 2015. Ecosystem modelling in the southern Benguela: comparisons of Atlantis, Ecopath with Ecosim, and OSMOSE under fishing scenarios. African Journal of Marine Science, 3765–78. 10.2989/1814232X.2015.1013501 2015 Model application 39
Coll, M.; Akoglu, E.; Arreguín-Sánchez, F.; Fulton, E. A.; Gascuel, D.; Heymans, J. J.; Libralato, S.; Mackinson, S.; Palomera, I.; Piroddi, C.; Shannon, L. J.; Steenbeek, J.; Villasante, S.; Christensen, V.; 2015. Modelling dynamic ecosystems: venturing beyond boundaries with the Ecopath approach. Reviews in Fish Biology and Fisheries, 25413–424. 10.1007/s11160-015-9386-x 2015 Model application 69
Coll, M.; Akoglu, E.; Arreguín-Sánchez, F.; Fulton, E. A.; Gascuel, D.; Heymans, J. J.; Libralato, S.; Mackinson, S.; Palomera, I.; Piroddi, C.; Shannon, L. J.; Steenbeek, J.; Villasante, S.; Christensen, V.; 2015. Modelling dynamic ecosystems: venturing beyond boundaries with the Ecopath approach. Reviews in Fish Biology and Fisheries, 25413–424. 10.1007/s11160-015-9386-x 2015 Model application 0
Janjua, Muhammad Yamin; Tallman, Ross; Howland, Kimberly; 2014. Elucidation of ecosystem attributes of two Mackenzie great lakes with trophic network analysis. Aquatic Ecosystem Health & Management, 17151–160. 10.1080/14634988.2014.910428 2014 Model application 3
Christensen, Villy; Coll, Marta; Steenbeek, Jeroen; Buszowski, Joe; Chagaris, Dave; Walters, Carl J.; 2014. Representing Variable Habitat Quality in a Spatial Food Web Model. Ecosystems, 171397–1412. 10.1007/s10021-014-9803-3 2014 Model application 108
Surma, Szymon; Pakhomov, Evgeny A.; Pitcher, Tony J.; Hazen, Elliott Lee; 2014. Effects of Whaling on the Structure of the Southern Ocean Food Web: Insights on the “Krill Surplus” from Ecosystem Modelling. PLoS ONE, 9e114978. 10.1371/journal.pone.0114978 2014 Model application 32
Neira, Sergio; Moloney, Coleen; Christensen, Villy; Cury, Philippe; Shannon, Lynne; Arancibia, Hugo; 2014. Analysing changes in the southern Humboldt ecosystem for the period 1970–2004 by means of dynamic food web modelling. Ecological Modelling, 27441–49. 10.1016/j.ecolmodel.2013.09.022 2014 Model application 10
Guénette, Sylvie; Meissa, Beyah; Gascuel, Didier; Stergiou, Konstantinos I.; 2014. Assessing the Contribution of Marine Protected Areas to the Trophic Functioning of Ecosystems: A Model for the Banc d’Arguin and the Mauritanian Shelf. PLoS ONE, 9e94742. 10.1371/journal.pone.0094742 2014 Model application 36
Barros, Monica E.; Neira, Sergio; Arancibia, Hugo; 2014. Trophic interactions in northern Chile upwelling ecosystem, year 1997. Latin American Journal of Aquatic Research, 421109–1125. 10.3856/vol42-issue5-fulltext-15 2014 Model application 5
Barros, Monica E.; Neira, Sergio; Arancibia, Hugo; 2014. Trophic interactions in northern Chile upwelling ecosystem, year 1997. Latin American Journal of Aquatic Research, 421109–1125. 10.3856/vol42-issue5-fulltext-15 2014 Model application 5
Alva-Basurto, Jorge Christian; Arias-González, Jesús Ernesto; 2014. Modelling the effects of climate change on a Caribbean coral reef food web. Ecological Modelling, 2891–14. 10.1016/j.ecolmodel.2014.06.014 2014 Model application 33
Christensen, Villy; Coll, Marta; Steenbeek, Jeroen; Buszowski, Joe; Chagaris, Dave; Walters, Carl J.; 2014. Representing Variable Habitat Quality in a Spatial Food Web Model. Ecosystems, 171397–1412. 10.1007/s10021-014-9803-3 2014 Model application 1
Warren, D. R.; Harvey, C. J.; McClure, M. M.; Sanderson, B. L.; 2014. Use of an Ecosystem-Based Model to Evaluate Alternative Conservation Strategies for Juvenile Chinook Salmon in a Headwater Stream. North American Journal of Fisheries Management, 34839–852. 10.1080/02755947.2014.910574 2014 Model application 11
Harvey, Chris J.; Rose, Kenneth; 2014. Mediation functions in Ecopath with Ecosim: handle with care. Canadian Journal of Fisheries and Aquatic Sciences, 711020–1029. 10.1139/cjfas-2013-0594 2014 Model application 14
Kao, Yu-Chun; Adlerstein, Sara; Rutherford, Edward; 2014. The relative impacts of nutrient loads and invasive species on a Great Lakes food web: An Ecopath with Ecosim analysis. Journal of Great Lakes Research, 4035–52. 10.1016/j.jglr.2014.01.010 2014 Model application 51
Barros, Mónica E.; Neira, Sergio; Arancibia, Hugo; 2014. Trophic interactions in northern Chile upwelling ecosystem, year 1997. Latin American Journal of Aquatic Research, 421109–1125. 10.3856/vol42-issue5-fulltext-15 2014 Model application 5
Langseth, Brian J.; Jones, Michael L.; Riley, Stephen C.; 2014. The effect of adjusting model inputs to achieve mass balance on time-dynamic simulations in a food-web model of Lake Huron. Ecological Modelling, 27344–54. 10.1016/j.ecolmodel.2013.10.027 2014 Model application 6
Christensen, Villy; de la Puente, Santiago; Sueiro, Juan Carlos; Steenbeek, Jeroen; Majluf, Patricia; 2014. Valuing seafood: The Peruvian fisheries sector. Marine Policy, 44302–311. 10.1016/j.marpol.2013.09.022 2014 Model application 83
Watson, Reg A.; Nowara, Gabrielle B.; Tracey, Sean R.; Fulton, Elizabeth A.; Bulman, Cathy M.; Edgar, Graham J.; Barrett, Neville S.; Lyle, Jeremy M.; Frusher, Stewart D.; Buxton, Colin D.; 2013. Ecosystem model of Tasmanian waters explores impacts of climate-change induced changes in primary productivity. Ecological Modelling, 264115–129. 10.1016/j.ecolmodel.2012.05.008 2013 Model application 33
Cruz-Escalona, Víctor H.; Morales-Zárate, María V.; Navia, Andrés F.; Rguez-Baron, Juan M.; Monte-Luna, Pablo del; 2013. Functional analysis of the food web of Bahia Magdalena, Baja California Sur, Mexico. Latin American Journal of Aquatic Research, 41519–544. 10.3856/vol41-issue3-fulltext-15 2013 Model application 4
Blanco, Juan A.; Cisneros-Montemayor, Andrés M.; 2013. Modelos ecológicos para analizar el papel económico de los peces de forraje. , 67–76. [11] 2013 Model application 6
Blanco, Juan A.; Cisneros-Montemayor, Andrés M.; 2013. Modelos ecológicos para analizar el papel económico de los peces de forraje. , 67–76. [12] 2013 Model application 2
Steenbeek, Jeroen; Coll, Marta; Gurney, Leigh; Mélin, Frédéric; Hoepffner, Nicolas; Buszowski, Joe; Christensen, Villy; 2013. Bridging the gap between ecosystem modeling tools and geographic information systems: Driving a food web model with external spatial–temporal data. Ecological Modelling, 263139–151. 10.1016/j.ecolmodel.2013.04.027 2013 Model application 100
Colléter, Mathieu; Guitton, Jérôme; Gascuel, Didier; 2013. An Introduction to the EcoTroph R Package: Analyzing Aquatic Ecosystem Trophic Networks. The R Journal, 598. 10.32614/RJ-2013-010 2013 Model application 35
Kinter, Bryan T.; Ludsin, Stuart A.; Smith, Ralph; 2013. Nutrient inputs versus piscivore biomass as the primary driver of reservoir food webs. Canadian Journal of Fisheries and Aquatic Sciences, 70367–380. 10.1139/cjfas-2012-0369 2013 Model application 9
Angelini, Ronaldo; de Morais, Ronny José; Catella, Agostinho Carlos; Resende, Emiko Kawakami; Libralato, Simone; 2013. Aquatic food webs of the oxbow lakes in the Pantanal: A new site for fisheries guaranteed by alternated control?. Ecological Modelling, 25382–96. 10.1016/j.ecolmodel.2013.01.001 2013 Model application 30
Ayers, Mj; Scharler, Um; Fennessy, St; 2013. Modelling ecosystem effects of reduced prawn recruitment on the Thukela Bank trawling grounds, South Africa, following nursery loss. Marine Ecology Progress Series, 479143–161. 10.3354/meps10192 2013 Model application 19
Ortiz, Marco; Campos, Leonardo; Berrios, Fernando; Rodriguez, Fabián; Hermosillo, Brenda; González, Jorge; 2013. Network properties and keystoneness assessment in different intertidal communities dominated by two ecosystem engineer species (SE Pacific coast): A comparative analysis. Ecological Modelling, 250307–318. 10.1016/j.ecolmodel.2012.10.014 2013 Model application 37
Niiranen, Susa; Yletyinen, Johanna; Tomczak, Maciej T.; Blenckner, Thorsten; Hjerne, Olle; MacKenzie, Brian R.; Müller-Karulis, Bärbel; Neumann, Thomas; Meier, H. E. Markus; 2013. Combined effects of global climate change and regional ecosystem drivers on an exploited marine food web. Global Change Biology, n/a–n/a. 10.1111/gcb.12309 2013 Model application 127
Plummer, Mark L.; Harvey, Chris J.; Anderson, Leif E.; Guerry, Anne D.; Ruckelshaus, Mary H.; 2013. The Role of Eelgrass in Marine Community Interactions and Ecosystem Services: Results from Ecosystem-Scale Food Web Models. Ecosystems, 16237–251. 10.1007/s10021-012-9609-0 2013 Model application 53
Zhang, X.; Zhang, L.; Tong, F.; Liu, H.; 2013. Predicting the ecological carrying capacity of the Lidao artificial reef zone of Shandong Province for the sea cucumber, Apostichopus japonicus, (Selenck) and the abalone, Haliotis discus hannai, using a linear food web model. Journal of Fishery Sciences of China, 20327-337. 10.3724/SP.J.1118.2013.00327 2013 Model application 5
Neira, Sergio; Arancibia, Hugo; 2013. Food web and fish stock changes in central Chile: comparing the roles of jumbo squid (Dosidicus gigas) predation, the environment, and fisheries. Deep Sea Research Part II: Topical Studies in Oceanography, 95103–112. 10.1016/j.dsr2.2013.04.003 2013 Model application 15
Hoover, Carie; Pitcher, Tony; Christensen, Villy; 2013. Effects of hunting, fishing and climate change on the Hudson Bay marine ecosystem: II. Ecosystem model future projections. Ecological Modelling, 264143–156. 10.1016/j.ecolmodel.2013.01.010 2013 Model application 19
Lin, Qun; Jin, Xianshi; Zhang, Bo; 2013. Trophic interactions, ecosystem structure and function in the southern Yellow Sea. Chinese Journal of Oceanology and Limnology, 3146–58. 10.1007/s00343-013-2013-6 2013 Model application 30
Hoover, Carie; Pitcher, Tony; Christensen, Villy; 2013. Effects of hunting, fishing and climate change on the Hudson Bay marine ecosystem: I. Re-creating past changes 1970–2009. Ecological Modelling, 264130–142. 10.1016/j.ecolmodel.2013.02.005 2013 Model application 22
Guo, Chuanbo; Ye, Shaowen; Lek, Sovan; Liu, Jiashou; Zhang, Tanglin; Yuan, Jin; Li, Zhongjie; 2013. The need for improved fishery management in a shallow macrophytic lake in the Yangtze River basin: Evidence from the food web structure and ecosystem analysis. Ecological Modelling, 267138–147. 10.1016/j.ecolmodel.2013.07.013 2013 Model application 35
Tecchio, Samuele; Coll, Marta; Christensen, Villy; Company, Joan B.; Ramírez-Llodra, Eva; Sardà, Francisco; 2013. Food web structure and vulnerability of a deep-sea ecosystem in the NW Mediterranean Sea. Deep Sea Research Part I: Oceanographic Research Papers, 751–15. 10.1016/j.dsr.2013.01.003 2013 Model application 67
Goldsworthy, Simon D.; Page, Brad; Rogers, Paul J.; Bulman, Cathy; Wiebkin, Annelise; McLeay, Lachlan J.; Einoder, Luke; Baylis, Alastair M.M.; Braley, Michelle; Caines, Robin; Daly, Keryn; Huveneers, Charlie; Peters, Kristian; Lowther, Andrew D.; Ward, Tim M.; 2013. Trophodynamics of the eastern Great Australian Bight ecosystem: Ecological change associated with the growth of Australia's largest fishery. Ecological Modelling, 25538–57. 10.1016/j.ecolmodel.2013.01.006 2013 Model application 58
Howell, Evan A.; Wabnitz, Colette C. C.; Dunne, John P.; Polovina, Jeffrey J.; 2013. Climate-induced primary productivity change and fishing impacts on the Central North Pacific ecosystem and Hawaii-based pelagic longline fishery. Climatic Change, 11979–93. 10.1007/s10584-012-0597-z 2013 Model application 28
Ortiz, Marco; Levins, Richard; Campos, Leonardo; Berrios, Fernando; Campos, Fernando; Jordán, Ferenc; Hermosillo, Brenda; Gonzalez, Jorge; Rodriguez, Fabián; 2013. Identifying keystone trophic groups in benthic ecosystems: Implications for fisheries management. Ecological Indicators, 25133–140. 10.1016/j.ecolind.2012.08.020 2013 Model application 59
Plummer, Mark L.; Harvey, Chris J.; Anderson, Leif E.; Guerry, Anne D.; Ruckelshaus, Mary H.; 2013. The Role of Eelgrass in Marine Community Interactions and Ecosystem Services: Results from Ecosystem-Scale Food Web Models. Ecosystems, 16237–251. 10.1007/s10021-012-9609-0 2013 Model application 2
Lozano-Montes, Hector; Loneragan, Neil R.; Babcock, Russ; Caputi, Nick; 2013. Evaluating the ecosystem effects of variation in recruitment and fishing effort in the western rock lobster fishery. Fisheries Research, 145128–135. 10.1016/j.fishres.2013.01.009 2013 Model application 8
Blanco, Juan A.; Bayle-Sempere, Just T.; Arreguín-Sanchez, Francisco; Sánchez-Jerez, Pablo; Fernández-Jover, Damián; Arechavala-López, Pablo; Izquierdo Gómez, David; 2013. Análisis y evaluación ecosistémicos de la piscicultura marina con "Ecopath with Ecosim" (EwE). , 39–65. [13] 2013 Model application 1
Langseth, Brian J.; Rogers, Mark; Zhang, Hongyan; 2012. Modeling species invasions in Ecopath with Ecosim: An evaluation using Laurentian Great Lakes models. Ecological Modelling, 247251–261. 10.1016/j.ecolmodel.2012.08.015 2012 Model application 47
Parrish, Frank A.; Howell, Evan A.; Antonelis, George A.; Iverson, Sara J.; Littnan, Charles L.; Parrish, James D.; Polovina, Jeffrey J.; 2012. Estimating the carrying capacity of French Frigate Shoals for the endangered Hawaiian monk seal using Ecopath with Ecosim. Marine Mammal Science, 28522–541. 10.1111/j.1748-7692.2011.00502.x 2012 Model application 15
Ullah, Md. Hadayet; Rashed-Un-Nabi, Md.; Al-Mamun, Md. Abdulla; 2012. Trophic model of the coastal ecosystem of the Bay of Bengal using mass balance Ecopath model. Ecological Modelling, 22582–94. 10.1016/j.ecolmodel.2011.11.013 2012 Model application 50
de Mutsert, Kim; Cowan, James H.; Walters, Carl J.; 2012. Using Ecopath with Ecosim to Explore Nekton Community Response to Freshwater Diversion into a Louisiana Estuary. Marine and Coastal Fisheries, 4104–116. 10.1080/19425120.2012.672366 2012 Model application 52
Niiranen, Susa; Blenckner, Thorsten; Hjerne, Olle; Tomczak, Maciej T.; 2012. Uncertainties in a Baltic Sea Food-Web Model Reveal Challenges for Future Projections. AMBIO, 41613–625. 10.1007/s13280-012-0324-z 2012 Model application 31
Hossain, Monir; Arhonditsis, George B.; Koops, Marten A.; Minns, Charles K.; 2012. Towards the development of an ecosystem model for the Hamilton Harbour, Ontario, Canada. Journal of Great Lakes Research, 38628–642. 10.1016/j.jglr.2012.09.015 2012 Model application 16
Varkey, Divya; Ainsworth, Cameron H.; Pitcher, Tony J.; 2012. Modelling Reef Fish Population Responses to Fisheries Restrictions in Marine Protected Areas in the Coral Triangle. Journal of Marine Biology, 20121–18. 10.1155/2012/721483 2012 Model application 34
Cisneros-Montemayor, Andrés M.; Christensen, Villy; Arreguín-Sánchez, Francisco; Sumaila, U. Rashid; 2012. Ecosystem models for management advice: An analysis of recreational and commercial fisheries policies in Baja California Sur, Mexico. Ecological Modelling, 2288–16. 10.1016/j.ecolmodel.2011.12.021 2012 Model application 25
Salcido-Guevara, Luís Antonio; Monte-Luna, Pablo del; Arreguín-Sánchez, Francisco; Cruz-Escalona, Víctor Hugo; 2012. Potential Ecosystem Level Effects of a Shrimp Trawling Fishery in La Paz Bay, Mexico. Open Journal of Marine Science, 285–89. 10.4236/ojms.2012.23011 2012 Model application 4
Lassalle, Géraldine; Gascuel, Didier; Le Loc'h, François; Lobry, Jérémy; Pierce, Graham John; Ridoux, Vincent; Santos, Maria Begoña; Spitz, Jérôme; Niquil, Nathalie; 2012. An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study. ICES Journal of Marine Science, 69925–938. 10.1093/icesjms/fss049 2012 Model application 75
Rogers, Mark W.; Allen, Micheal S.; 2012. An Ecosystem Model for Exploring Lake Restoration Effects on Fish Communities and Fisheries in Florida. Restoration Ecology, 20612–622. 10.1111/j.1526-100X.2011.00819.x 2012 Model application 12
Wang, Y.; Li, S.Y.; Duan, L.J.; Liu, Y.; 2012. Fishery policy exploration in the Pearl River Estuary based on an Ecosim model. Ecological Modelling, 23034–43. 10.1016/j.ecolmodel.2012.01.017 2012 Model application 25
Wondie, Ayalew; Fetahi, Tadesse; 2012. Trophic Interactions in Lake Tana, a Large Turbid Highland Lake in Ethiopia. , 25217–235. [14] 2012 Model application 7
Castelblanco-Martínez, Delma Nataly; Barba, Everardo; Schmitter-Soto, Juan Jacobo; Hernández-Arana, Héctor Abuid; Morales-Vela, Benjamín; 2012. The Trophic Role of the Endangered Caribbean Manatee Trichechus manatus in an Estuary with low Abundance of Seagrass. Estuaries and Coasts, 3560–77. 10.1007/s12237-011-9420-8 2012 Model application 29
Li, Yunkai; Zhang, Yuying; 2012. Fisheries impact on the East China Sea Shelf ecosystem for 1969–2000. Helgoland Marine Research, 66371–383. 10.1007/s10152-011-0278-8 2012 Model application 9
Jia, Peiqiao; Hu, Menghong; Hu, Zhongjun; Liu, Qigen; Wu, Zhen; 2012. Modeling trophic structure and energy flows in a typical macrophyte dominated shallow lake using the mass balanced model. Ecological Modelling, 23326–30. 10.1016/j.ecolmodel.2012.02.026 2012 Model application 25
Tomczak, M.T.; Niiranen, S.; Hjerne, O.; Blenckner, T.; 2012. Ecosystem flow dynamics in the Baltic Proper—Using a multi-trophic dataset as a basis for food–web modelling. Ecological Modelling, 230123–147. 10.1016/j.ecolmodel.2011.12.014 2012 Model application 103
Coll, Marta; Libralato, Simone; 2012. Contributions of food web modelling to the ecosystem approach to marine resource management in the Mediterranean Sea: Ecosystem approach in the Mediterranean Sea. Fish and Fisheries, 1360–88. 10.1111/j.1467-2979.2011.00420.x 2012 Model application 143
Li, Yunkai; Zhang, Yuying; 2012. Fisheries impact on the East China Sea Shelf ecosystem for 1969–2000. Helgoland Marine Research, 66371–383. 10.1007/s10152-011-0278-8 2012 Model application 0
Nascimento, Marcela C.; Velasco, Gonzalo; Okey, Thomas A.; Christensen, Villy; Z. Amaral, A. Cecília; 2011. Trophic model of the outer continental shelf and upper slope demersal community of the southeastern Brazilian Bight. Scientia Marina, 0. 10.3989/scimar.03359.26A 2011 Model application 12
Jopp, Fred; Reuter, Hauke; Breckling, Broder; Wolff, Matthias; Taylor, Marc; 2011. Steady State Models of Ecological Systems: EcoPath Approach to Mass-Balanced System Descriptions. , 55–66. [15] 2011 Model application 0
Arias-González, Jesús Ernesto; González-Gándara, Carlos; Luis Cabrera, José; Christensen, Villy; 2011. Predicted impact of the invasive lionfish Pterois volitans on the food web of a Caribbean coral reef. Environmental Research, 111917–925. 10.1016/j.envres.2011.07.008 2011 Model application 127
Christensen, Villy; Steenbeek, Jeroen; Failler, Pierre; 2011. A combined ecosystem and value chain modeling approach for evaluating societal cost and benefit of fishing. Ecological Modelling, 222857–864. 10.1016/j.ecolmodel.2010.09.030 2011 Model application 63
Ainsworth, C. H.; Samhouri, J. F.; Busch, D. S.; Cheung, W. W. L.; Dunne, J.; Okey, T. A.; 2011. Potential impacts of climate change on Northeast Pacific marine foodwebs and fisheries. ICES Journal of Marine Science, 681217–1229. 10.1093/icesjms/fsr043 2011 Model application 174
Chen, Zuozhi; Xu, Shannan; He, Peimin; 2011. An ecological model of the artificial ecosystem (northern Hangzhou Bay, China): analysis of ecosystem structure and fishing impacts. Helgoland Marine Research, 65217–231. 10.1007/s10152-010-0218-z 2011 Model application 13
Frisk, M.G.; Miller, T.J.; Latour, R.J.; Martell, S.J.D.; 2011. Assessing biomass gains from marsh restoration in Delaware Bay using Ecopath with Ecosim. Ecological Modelling, 222190–200. 10.1016/j.ecolmodel.2010.08.026 2011 Model application 39
Espinosa-Romero, Maria J.; Gregr, Edward J.; Walters, Carl; Christensen, Villy; Chan, Kai M.A.; 2011. Representing mediating effects and species reintroductions in Ecopath with Ecosim. Ecological Modelling, 2221569–1579. 10.1016/j.ecolmodel.2011.02.008 2011 Model application 35
Heymans, Johanna J.; Howell, Kerry L.; Ayers, Morag; Burrows, Michael T.; Gordon, John D. M.; Jones, Emma G.; Neat, Francis; 2011. Do we have enough information to apply the ecosystem approach to management of deep-sea fisheries? An example from the West of Scotland. ICES Journal of Marine Science, 68265–280. 10.1093/icesjms/fsq065 2011 Model application 46
Steele, John H.; Ruzicka, James J.; 2011. Constructing end-to-end models using ECOPATH data. Journal of Marine Systems, 87227–238. 10.1016/j.jmarsys.2011.04.005 2011 Model application 47
Lassalle, G.; Lobry, J.; Le Loc’h, F.; Bustamante, P.; Certain, G.; Delmas, D.; Dupuy, C.; Hily, C.; Labry, C.; Le Pape, O.; Marquis, E.; Petitgas, P.; Pusineri, C.; Ridoux, V.; Spitz, J.; Niquil, N.; 2011. Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management. Progress in Oceanography, 91561–575. 10.1016/j.pocean.2011.09.002 2011 Model application 105
Ayers, Morag J.; Scharler, Ursula M.; 2011. Use of sensitivity and comparative analyses in constructing plausible trophic mass-balance models of a data-limited marine ecosystem — The KwaZulu-Natal Bight, South Africa. Journal of Marine Systems, 88298–311. 10.1016/j.jmarsys.2011.05.006 2011 Model application 29
Zhang, Tian Wen; Su, Yue Peng; Ma, Shen; 2011. A Preliminary Study of Ecopath with Ecosim to the Shrimp Pond Ecosystem. Applied Mechanics and Materials, 88423–426. 10.4028/www.scientific.net/AMM.88-89.423 2011 Model application 1
Espinosa-Romero, Maria J.; Gregr, Edward J.; Walters, Carl; Christensen, Villy; Chan, Kai M.A.; 2011. Erratum to “Representing mediating effects and species reintroductions in Ecopath with Ecosim” [Ecol. Model. 222 (2011) 1569–1579]. Ecological Modelling, 2222168. 10.1016/j.ecolmodel.2011.04.001 2011 Model application 0
Xu, Shannan; Chen, Zuozhi; Li, Chunhou; Huang, Xiaoping; Li, Shiyu; 2011. Assessing the carrying capacity of tilapia in an intertidal mangrove-based polyculture system of Pearl River Delta, China. Ecological Modelling, 222846–856. 10.1016/j.ecolmodel.2010.11.014 2011 Model application 33
Baeta, Alexandra; Niquil, Nathalie; Marques, João C.; Patrício, Joana; 2011. Modelling the effects of eutrophication, mitigation measures and an extreme flood event on estuarine benthic food webs. Ecological Modelling, 2221209–1221. 10.1016/j.ecolmodel.2010.12.010 2011 Model application 70
Xu, Shannan; Chen, Zuozhi; Li, Shiyu; He, Peimin; 2011. Modeling Trophic Structure and Energy Flows in a Coastal Artificial Ecosystem Using Mass-Balance Ecopath Model. Estuaries and Coasts, 34351–363. 10.1007/s12237-010-9323-0 2011 Model application 45
Feng, D.; Chen, L.; Li, Y.; Yu, N.; Chen, L.; 2011. Structure and energy flow of Dianshan Lake ecosystem based on the Ecopath model. Journal of Fishery Sciences of China, 18867-876. 10.3724/SP.J.1118.2011.00867 2011 Model application 5
Zhang, Chang Ik; Hollowed, Anne Babcock; Lee, Jae-Bong; Kim, Do-Hoon; 2011. An IFRAME approach for assessing impacts of climate change on fisheries. ICES Journal of Marine Science, 681318–1328. 10.1093/icesjms/fsr073 2011 Model application 28
Piroddi, Chiara; Giovanni, Bearzi; Villy, Christensen; 2010. Effects of local fisheries and ocean productivity on the northeastern Ionian Sea ecosystem. Ecological Modelling, 2211526–1544. 10.1016/j.ecolmodel.2010.03.002 2010 Model application 89
Hutchings, L.; Augustyn, C.J.; Cockcroft, A.; Van der Lingen, C.; Coetzee, J.; Leslie, R. W.; Tarr, R. J.; Oosthuizen, H.; Lipinski, M. R.; Roberts, M. R.; Wilke, C.; Crawford, R.; Shannon, L. J.; Mayekiso, M.; 2010. Marine fisheries monitoring programmes in South Africa. South African Journal of Science, 105182. 10.4102/sajs.v105i5/6.85 2010 Model application 27
Hossain, Md. Monir; Matsuishi, Takashi; Arhonditsis, George; 2010. Elucidation of ecosystem attributes of an oligotrophic lake in Hokkaido, Japan, using Ecopath with Ecosim (EwE). Ecological Modelling, 2211717–1730. 10.1016/j.ecolmodel.2010.03.025 2010 Model application 30
Travers, M.; Watermeyer, K.; Shannon, L.J.; Shin, Y.-J.; 2010. Changes in food web structure under scenarios of overfishing in the southern Benguela: Comparison of the Ecosim and OSMOSE modelling approaches. Journal of Marine Systems, 79101–111. 10.1016/j.jmarsys.2009.07.005 2010 Model application 81
Cerco, Carl F.; Tillman, Dorothy; 2010. Coupling and comparing a spatially- and temporally-detailed eutrophication model with an ecosystem network model: An initial application to Chesapeake Bay. Environmental Modelling & Software, 25562–572. 10.1016/j.envsoft.2009.09.008 2010 Model application 39
Ortiz, Marco; 2010. Dynamic and spatial models of kelp forest of Macrocystis integrifolia and Lessonia trabeculata (SE Pacific) for assessment harvest scenarios: short-term responses. Aquatic Conservation: Marine and Freshwater Ecosystems, 20494–506. 10.1002/aqc.1126 2010 Model application 35
Angelini, Ronaldo; Vaz-Velho, Filomena; 2010. Ecosystem structure and trophic analysis of Angolan fishery landings. Scientia Marina, 75309–319. 10.3989/scimar.2011.75n2309 2010 Model application 21
Li, Yunkai; Song, Bing; Chen, Yong; Chen, Liqiao; Yu, Na; Olson, Derek; 2010. Changes in the trophic interactions and the community structure of Lake Taihu (China) ecosystem from the 1960s to 1990s. Aquatic Ecology, 44337–348. 10.1007/s10452-009-9293-0 2010 Model application 25
Antony, P.J.; Dhanya, S.; Lyla, P.S.; Kurup, B.M.; Ajmal Khan, S.; 2010. Ecological role of stomatopods (mantis shrimps) and potential impacts of trawling in a marine ecosystem of the southeast coast of India. Ecological Modelling, 2212604–2614. 10.1016/j.ecolmodel.2010.07.017 2010 Model application 23
Metcalf, Sarah J.; 2010. Qualitative Models to Complement Quantitative Ecosystem Models for the Analysis of Data-Limited Marine Ecosystems and Fisheries. Reviews in Fisheries Science, 18248–265. 10.1080/10641262.2010.505670 2010 Model application 16
Ma, Hongguang; Townsend, Howard; Zhang, Xinsheng; Sigrist, Maddy; Christensen, Villy; 2010. Using a fisheries ecosystem model with a water quality model to explore trophic and habitat impacts on a fisheries stock: A case study of the blue crab population in the Chesapeake Bay. Ecological Modelling, 221997–1004. 10.1016/j.ecolmodel.2009.01.026 2010 Model application 32
Lee, Sung Il; Aydin, Kerim Y.; Spencer, Paul D.; Wilderbuer, Thomas K.; Zhang, Chang Ik; 2010. The role of flatfishes in the organization and structure of the eastern Bering Sea ecosystem. Fisheries Science, 76411–434. 10.1007/s12562-009-0201-2 2010 Model application 9
Megrey, Bernard A.; Moksness, Erlend; Coll, Marta; Bundy, Alida; Shannon, Lynne J.; 2009. Ecosystem Modelling Using the Ecopath with Ecosim Approach. , 225–291. [16] 2009 Model application 64
Stanford, Richard James; 2009. The English Channel : subtitle a mixed fishery, but which mix is best?. , . 10.14288/1.0074869 2009 Model application 0
Pauly, Daniel; Graham, William; Libralato, Simone; Morissette, Lyne; Deng Palomares, M. L.; 2009. Jellyfish in ecosystems, online databases, and ecosystem models. Hydrobiologia, 61667–85. 10.1007/s10750-008-9583-x 2009 Model application 286
Jørgensen, S. E.; Chon, T. -S.; Recknagel, F.; Christensen, V.; 2009. Ecopath with Ecosim: linking fisheries and ecology. , 155–70. [17] 2009 Model application 24
Christensen, Villy; Ferdaña, Zach; Steenbeek, Jeroen; 2009. Spatial optimization of protected area placement incorporating ecological, social and economical criteria. Ecological Modelling, 2202583–2593. 10.1016/j.ecolmodel.2009.06.029 2009 Model application 68
Guénette, Sylvie; Hill, Ronald L.; 2009. A trophic model of the coral reef ecosystem of La Parguera, Puerto Rico: synthesizing fisheries and ecological data. Caribbean Journal of Science, 45317–337. 10.18475/cjos.v45i2.a17 2009 Model application 6
Duan, L.J.; Li, S.Y.; Liu, Y.; Jiang, T.; Failler, P.; 2009. A trophic model of the Pearl River Delta coastal ecosystem. Ocean & Coastal Management, 52359–367. 10.1016/j.ocecoaman.2009.04.005 2009 Model application 34
Neira, Sergio; Moloney, Coleen L.; Cury, Philippe; Mullon, Christian; Christensen, Villy; 2009. Mechanisms affecting recovery in an upwelling food web: The case of the southern Humboldt. Progress in Oceanography, 83404–416. 10.1016/j.pocean.2009.07.007 2009 Model application 11
Libralato, Simone; Solidoro, Cosimo; 2009. Bridging biogeochemical and food web models for an End-to-End representation of marine ecosystem dynamics: The Venice lagoon case study. Ecological Modelling, 2202960–2971. 10.1016/j.ecolmodel.2009.08.017 2009 Model application 53
Morissette, Lyne; Pedersen, Torstein; Nilsen, Marianne; 2009. Comparing pristine and depleted ecosystems: The Sørfjord, Norway versus the Gulf of St. Lawrence, Canada. Effects of intense fisheries on marine ecosystems. Progress in Oceanography, 81174–187. 10.1016/j.pocean.2009.04.013 2009 Model application 14
Lin, H.-J.; Shao, K.-T.; Hsieh, H.-L.; Lo, W.-T.; Dai, X.-X.; 2009. The effects of system-scale removal of oyster-culture racks from Tapong Bay, southwestern Taiwan: model exploration and comparison with field observations. ICES Journal of Marine Science, 66797–810. 10.1093/icesjms/fsp078 2009 Model application 17
Duan, L.J.; Li, S.Y.; Liu, Y.; Moreau, J.; Christensen, V.; 2009. Modeling changes in the coastal ecosystem of the Pearl River Estuary from 1981 to 1998. Ecological Modelling, 2202802–2818. 10.1016/j.ecolmodel.2009.07.016 2009 Model application 42
Ortiz, Marco; Avendaño, Miguel; Campos, Leonardo; Berrios, Fernando; 2009. Spatial and mass balanced trophic models of La Rinconada Marine Reserve (SE Pacific coast), a protected benthic ecosystem: Management strategy assessment. Ecological Modelling, 2203413–3423. 10.1016/j.ecolmodel.2009.08.020 2009 Model application 28
Chen, Zuozhi; Xu, Shannan; Qiu, Yongsong; Lin, Zhaojin; Jia, Xiaoping; 2009. Modeling the effects of fishery management and marine protected areas on the Beibu Gulf using spatial ecosystem simulation. Fisheries Research, 100222–229. 10.1016/j.fishres.2009.08.001 2009 Model application 73
Christensen, Villy; Walters, Carl J.; Ahrens, Robert; Alder, Jacqueline; Buszowski, Joe; Christensen, Line Bang; Cheung, William W.L.; Dunne, John; Froese, Rainer; Karpouzi, Vasiliki; Kaschner, Kristin; Kearney, Kelly; Lai, Sherman; Lam, Vicki; Palomares, Maria L.D.; Peters-Mason, Aja; Piroddi, Chiara; Sarmiento, Jorge L.; Steenbeek, Jeroen; Sumaila, Rashid; Watson, Reg; Zeller, Dirk; Pauly, Daniel; 2009. Database-driven models of the world's Large Marine Ecosystems. Ecological Modelling, 2201984–1996. 10.1016/j.ecolmodel.2009.04.041 2009 Model application 93
Gascuel, Didier; Pauly, Daniel; 2009. EcoTroph: Modelling marine ecosystem functioning and impact of fishing. Ecological Modelling, 2202885–2898. 10.1016/j.ecolmodel.2009.07.031 2009 Model application 85
Heymans, Johanna Jacomina; Sumaila, Ussif Rashid; Christensen, Villy; 2009. Policy options for the northern Benguela ecosystem using a multispecies, multifleet ecosystem model. Progress in Oceanography, 83417–425. 10.1016/j.pocean.2009.07.013 2009 Model application 34
Ainsworth, C. H.; Pitcher, T. J.; 2009. A bioeconomic optimization approach for rebuilding marine communities: British Columbia case study. Environmental Conservation, 36301–311. 10.1017/S0376892910000135 2009 Model application 4
Vidal Hernandez, Laura; 2009. Exploring the Gulf of Mexico as a large marine ecosystem through a stratified spatial model. , . 10.14288/1.0074853 2009 Model application 7
Persad, Gale; Webber, Mona; 2009. The Use of Ecopath Software to Model Trophic Interactions within the Zooplankton Community of Discovery Bay, Jamaica. The Open Marine Biology Journal, 395–104. 10.2174/1874450800903010095 2009 Model application 16
Ortiz, Marco; Avendaño, Miguel; Cantillañez, Marcela; Berrios, Fernando; Campos, Leonardo; 2009. Trophic mass balanced models and dynamic simulations of benthic communities from La Rinconada Marine Reserve off northern Chile: network properties and multispecies harvest scenario assessments. Aquatic Conservation: Marine and Freshwater Ecosystems, n/a–n/a. 10.1002/aqc.1047 2009 Model application 30
Ortiz, Marco; 2008. Mass balanced and dynamic simulations of trophic models of kelp ecosystems near the Mejillones Peninsula of northern Chile (SE Pacific): Comparative network structure and assessment of harvest strategies. Ecological Modelling, 21631–46. 10.1016/j.ecolmodel.2008.04.006 2008 Model application 53
Chen, Zuozhi; Qiu, Yongsong; Jia, Xiaoping; Xu, Shannan; 2008. Using an Ecosystem Modeling Approach to Explore Possible Ecosystem Impacts of Fishing in the Beibu Gulf, Northern South China Sea. Ecosystems, 111318–1334. 10.1007/s10021-008-9200-x 2008 Model application 28
Ortiz, Marco; Wolff, Matthias; 2008. Mass-balanced trophic and loop models of complex benthic systems in northern Chile (SE Pacific) to improve sustainable interventions: a comparative analysis. Hydrobiologia, 6051–10. 10.1007/s10750-008-9362-8 2008 Model application 13
Chen, Zuozhi; Qiu, Yongsong; Jia, Xiaoping; Xu, Shannan; 2008. Simulating fisheries management options for the Beibu Gulf by means of an ecological modelling optimization routine. Fisheries Research, 89257–265. 10.1016/j.fishres.2007.09.004 2008 Model application 19
Watermeyer, Ke; Shannon, Lj; Griffiths, Cl; 2008. Changes in the trophic structure of the southern Benguela before and after the onset of industrial fishing. African Journal of Marine Science, 30351–382. 10.2989/AJMS.2008.30.2.11.561 2008 Model application 38
Cheung, William W.L.; Sumaila, U. Rashid; 2008. Trade-offs between conservation and socio-economic objectives in managing a tropical marine ecosystem. Ecological Economics, 66193–210. 10.1016/j.ecolecon.2007.09.001 2008 Model application 166
Traore, A.; Ouattara, A.; Doumbia, L.; Tah, L.; Moreau, J.; Gourène, G.; 2008. Trophic structure and interactions in Lake Ayamé (Côte d’Ivoire). Knowledge and Management of Aquatic Ecosystems, 02. 10.1051/kmae:2008002 2008 Model application 14
Pascoe, Sean; Okey, Tomas A.; Griffiths, Shane; 2008. Economic and ecosystem impacts of illegal, unregulated and unreported (IUU) fishing in Northern Australia*. Australian Journal of Agricultural and Resource Economics, 52433–452. 10.1111/j.1467-8489.2008.00420.x 2008 Model application 13
Taylor, Marc H.; Wolff, Matthias; Mendo, Jaime; Yamashiro, Carmen; 2008. Changes in trophic flow structure of Independence Bay (Peru) over an ENSO cycle. Progress in Oceanography, 79336–351. 10.1016/j.pocean.2008.10.006 2008 Model application 59
Haputhantri, S.S.K.; Villanueva, M.C.S.; Moreau, J.; 2008. Trophic interactions in the coastal ecosystem of Sri Lanka: An ECOPATH preliminary approach. Estuarine, Coastal and Shelf Science, 76304–318. 10.1016/j.ecss.2007.07.013 2008 Model application 33
Cornejo-Donoso, Jorge; Antezana, Tarsicio; 2008. Preliminary trophic model of the Antarctic Peninsula Ecosystem (Sub-area CCAMLR 48.1). Ecological Modelling, 2181–17. 10.1016/j.ecolmodel.2008.06.011 2008 Model application 64
Tsehaye, Iyob; Nagelkerke, Leopold A.J.; 2008. Exploring optimal fishing scenarios for the multispecies artisanal fisheries of Eritrea using a trophic model. Ecological Modelling, 212319–333. 10.1016/j.ecolmodel.2007.10.044 2008 Model application 39
Guénette, Sylvie; Christensen, Villy; Pauly, Daniel; 2008. Trophic modelling of the Peruvian upwelling ecosystem: Towards reconciliation of multiple datasets. Progress in Oceanography, 79326–335. 10.1016/j.pocean.2008.10.005 2008 Model application 45
Watermeyer, Ke; Shannon, Lj; Roux, J-P; Griffiths, Cl; 2008. Changes in the trophic structure of the northern Benguela before and after the onset of industrial fishing. African Journal of Marine Science, 30383–403. 10.2989/AJMS.2008.30.2.12.562 2008 Model application 58
Taylor, Marc H.; Tam, Jorge; Blaskovic, Verónica; Espinoza, Pepe; Michael Ballón, R.; Wosnitza-Mendo, Claudia; Argüelles, Juan; Díaz, Erich; Purca, Sara; Ochoa, Noemi; Ayón, Patricia; Goya, Elisa; Gutiérrez, Dimitri; Quipuzcoa, Luis; Wolff, Matthias; 2008. Trophic modeling of the Northern Humboldt Current Ecosystem, Part II: Elucidating ecosystem dynamics from 1995 to 2004 with a focus on the impact of ENSO. Progress in Oceanography, 79366–378. 10.1016/j.pocean.2008.10.008 2008 Model application 72
M.F. Freire, Kátia; Christensen, Villy; Pauly, Daniel; 2008. Descripción del gran ecosistema marino del noreste de Brasil usando un modelo trófico. Scientia Marina, 72477–491. 10.3989/scimar.2008.72n3477 2008 Model application 43
Arreguin-Sanchez, Francisco; Zetina-Rejón, Manuel; Ramírez-Rodríguez, Mauricio; 2008. Exploring ecosystem-based harvesting strategies to recover the collapsed pink shrimp (Farfantepenaeus duorarum) fishery in the southern Gulf of Mexico. Ecological Modelling, 21483–94. 10.1016/j.ecolmodel.2007.11.021 2008 Model application 26
Ainsworth, C.H.; Pitcher, T.J.; Heymans, J.J.; Vasconcellos, M.; 2008. Reconstructing historical marine ecosystems using food web models: Northern British Columbia from Pre-European contact to present. Ecological Modelling, 216354–368. 10.1016/j.ecolmodel.2008.05.005 2008 Model application 53
Higgins, R.M.; Vandeperre, F.; Pérez-Ruzafa, A.; Santos, R.S.; 2008. Priorities for fisheries in marine protected area design and management: Implications for artisanal-type fisheries as found in southern Europe. Journal for Nature Conservation, 16222–233. 10.1016/j.jnc.2008.09.001 2008 Model application 27
Dulyapruk, V.; Moreau, J.; Jumnongsong, S.; Thapanand, T.; Janekitkarn, S.; Wongrat, L.; 2008. Financial Implications of Fishery Management Strategies in a Newly Impounded Man-made Lake in Thailand, a Simulation. Asian Fisheries Science, 21. 10.33997/j.afs.2008.21.1.006 2008 Model application 0
Beattie, Alasdair; Sumaila, Ussif Rashid; Christensen, Villy; Pauly, Daniel; 2008. A MODEL FOR THE BIOECONOMIC EVALUATION OF MARINE PROTECTED AREA SIZE AND PLACEMENT IN THE NORTH SEA. Natural Resource Modeling, 15413–437. 10.1111/j.1939-7445.2002.tb00096.x 2008 Model application 70
Pavés, Héctor J.; González, Humberto E.; 2008. Carbon fluxes within the pelagic food web in the coastal area off Antofagasta (23°S), Chile: The significance of the microbial versus classical food webs. Ecological Modelling, 212218–232. 10.1016/j.ecolmodel.2007.10.004 2008 Model application 27
Sandberg, J.; Kumblad, L.; Kautsky, U.; 2007. Can ECOPATH with ECOSIM enhance models of radionuclide flows in food webs? – an example for 14C in a coastal food web in the Baltic Sea. Journal of Environmental Radioactivity, 9296–111. 10.1016/j.jenvrad.2006.09.010 2007 Model application 14
Lin, Hsing-Juh; Shao, Kwang-Tsao; Jan, Rong-Quen; Hsieh, Hwey-Lian; Chen, Chang-Po; Hsieh, Li-Yung; Hsiao, Yi-Ting; 2007. A trophic model for the Danshuei River Estuary, a hypoxic estuary in northern Taiwan. Marine Pollution Bulletin, 541789–1800. 10.1016/j.marpolbul.2007.07.008 2007 Model application 38
Gonenc, I. Ethem; Koutitonsky, Vladimir G.; Rashleigh, Brenda; Ambrose, Robert B.; Wolflin, John P.; Razinkovas, Arturas; 2007. TROPHIC NETWORK MODELS AND PREDICTION OF TOXIC SUBSTANCES ACCUMULATION IN FOOD WEBS. , 279–289. [18] 2007 Model application 2
An, Nguyen Tac; Son, Vo Duy; 2007. THE ENERGY TRANSFER BETWEEN PRIMARY PRODUCTION AND FISH YIELD IN THE TROPICAL REGION. Vietnam Journal of Marine Science and Technology, 7. 10.15625/1859-3097/7/4/6355 2007 Model application 0
Medina, Marianela; Arancibia, Hugo; Neira, Sergio; 2007. A preliminary trophic model of the pelagic ecosystem in northern Chile (18°20’S-24°00’S). Investigaciones marinas, 3525–38. 10.4067/S0717-71782007000100003 2007 Model application 17
Cruz-Escalona, V.H.; Arreguín-Sánchez, F.; Zetina-Rejón, M.; 2007. Analysis of the ecosystem structure of Laguna Alvarado, western Gulf of Mexico, by means of a mass balance model. Estuarine, Coastal and Shelf Science, 72155–167. 10.1016/j.ecss.2006.10.013 2007 Model application 58
Pitcher, Tony J.; Ainsworth, Cameron H.; Bailey, Megan; 2007. Ecological and economic analyses of marine ecosystems in the Bird's Head Seascape, Papua, Indonesia: I. , . 10.14288/1.0074756 2007 Model application 13
Fetahi, Tadesse; Mengistou, Seyoum; 2007. Trophic analysis of Lake Awassa (Ethiopia) using mass-balance Ecopath model. Ecological Modelling, 201398–408. 10.1016/j.ecolmodel.2006.10.010 2007 Model application 69
Le Quesne, Will J.F.; Arreguín-Sánchez, Francisco; Heymans, Sheila J.J.; 2007. INCOFISH ecosystem models: Transiting from Ecopath to Ecospace.. , . 10.14288/1.0074767 2007 Model application 12
Thapanand, Thanitha; Moreau, Jacques; Jutagate, Tuantong; Wongrat, Prachit; Lekchonlayut, Teera; Meksumpun, Charumas; Janekitkarn, Sommai; Rodloi, Arunee; Dulyapruk, Varunthat; Wongrat, Ladda; 2007. Towards possible fishery management strategies in a newly impounded man-made lake in Thailand. Ecological Modelling, 204143–155. 10.1016/j.ecolmodel.2006.12.041 2007 Model application 21
Walters, Carl; Christensen, Villy; 2007. Adding realism to foraging arena predictions of trophic flow rates in Ecosim ecosystem models: Shared foraging arenas and bout feeding. Ecological Modelling, 209342–350. 10.1016/j.ecolmodel.2007.06.025 2007 Model application 74
Österblom, Henrik; Hansson, Sture; Larsson, Ulf; Hjerne, Olle; Wulff, Fredrik; Elmgren, Ragnar; Folke, Carl; 2007. Human-induced Trophic Cascades and Ecological Regime Shifts in the Baltic Sea. Ecosystems, 10877–889. 10.1007/s10021-007-9069-0 2007 Model application 395
Heymans, Johanna Jacomina; Guénette, Sylvie; Christensen, Villy; 2007. Evaluating Network Analysis Indicators of Ecosystem Status in the Gulf of Alaska. Ecosystems, 10488–502. 10.1007/s10021-007-9034-y 2007 Model application 78
Alder, Jackie; Guénette, Sylvie; Beblow, Jordan; Cheung, William; Christensen, Villy; 2007. Ecosystem-based global fishing policy scenarios. , . 10.14288/1.0074764 2007 Model application 25
Essington, Timothy E; 2007. Evaluating the sensitivity of a trophic mass-balance model (Ecopath) to imprecise data inputs. Canadian Journal of Fisheries and Aquatic Sciences, 64628–637. 10.1139/f07-042 2007 Model application 98
Feng, Jianfeng; Wang, Hongli; Huang, Dongwei; Li, Shengpeng; 2006. Alternative attractors in marine ecosystems: A comparative analysis of fishing effects. Ecological Modelling, 195377–384. 10.1016/j.ecolmodel.2005.11.033 2006 Model application 12
Matsuishi, T.; Muhoozi, L.; Mkumbo, O.; Budeba, Y.; Njiru, M.; Asila, A.; Othina, A.; Cowx, I. G.; 2006. Are the exploitation pressures on the Nile perch fisheries resources of Lake Victoria a cause for concern?. Fisheries Management and Ecology, 1353–71. 10.1111/j.1365-2400.2006.00477.x 2006 Model application 113
Patrício, Joana; Marques, João Carlos; 2006. Mass balanced models of the food web in three areas along a gradient of eutrophication symptoms in the south arm of the Mondego estuary (Portugal). Ecological Modelling, 19721–34. 10.1016/j.ecolmodel.2006.03.008 2006 Model application 94
Lachica-Aliño, Lualhati; Wolff, Matthias; David, Laura T.; 2006. Past and future fisheries modeling approaches in the Philippines. Reviews in Fish Biology and Fisheries, 16201–212. 10.1007/s11160-006-9008-8 2006 Model application 17
Ainsworth, Cameron H.; 2006. Strategic marine ecosystem restoration in northern British Columbia. , . 10.14288/1.0074895 2006 Model application 28
Coll, Marta; Palomera, Isabel; Tudela, Sergi; Sardà, Francesc; 2006. Trophic flows, ecosystem structure and fishing impacts in the South Catalan Sea, Northwestern Mediterranean. Journal of Marine Systems, 5963–96. 10.1016/j.jmarsys.2005.09.001 2006 Model application 266
Angelini, Ronaldo; Fabrè, Nídia Noemi; Silva-JR, Urbano Lopes da; 2006. Trophic analysis and fishing simulation of the biggest Amazonian catfish. , . 10.5897/AJAR.9000747 2006 Model application 26
Ainsworth, C; Pitcher, T; 2006. Modifying Kempton's species diversity index for use with ecosystem simulation models. Ecological Indicators, 6623–630. 10.1016/j.ecolind.2005.08.024 2006 Model application 101
Libralato, Simone; Christensen, Villy; Pauly, Daniel; 2006. A method for identifying keystone species in food web models. Ecological Modelling, 195153–171. 10.1016/j.ecolmodel.2005.11.029 2006 Model application 461
Criales-Hernandez, Maria Isabel; Duarte, Luis O.; García, Camilo B.; Manjarrés, Luis; 2006. Ecosystem impacts of the introduction of bycatch reduction devices in a tropical shrimp trawl fishery: Insights through simulation. Fisheries Research, 77333–342. 10.1016/j.fishres.2005.10.005 2006 Model application 38
Chuenpagdee, Ratana; Liguori, Lisa; Preikshot, Dave; Pauly, Daniel; 2006. A Public Sentiment Index for Ecosystem Management. Ecosystems, 9463–473. 10.1007/s10021-006-0105-2 2006 Model application 26
Angelini, Ronaldo; Agostinho, Angelo Antonio; Gomes, Luiz Carlos; 2006. Modeling energy flow in a large Neotropical reservoir: a tool do evaluate fishing and stability. Neotropical Ichthyology, 4253–260. 10.1590/S1679-62252006000200011 2006 Model application 25
Pinnegar, John K.; Blanchard, Julia L.; Mackinson, Steve; Scott, Robert D.; Duplisea, Daniel E.; 2005. Aggregation and removal of weak-links in food-web models: system stability and recovery from disturbance. Ecological Modelling, 184229–248. 10.1016/j.ecolmodel.2004.09.003 2005 Model application 127
Canziani, Gonzalo Velasco; Castello, Jorge Pablo; 2005. An ecotrophic model of southern Brazil continental shelf and fisheries scenarios for engraulis anchoita (Pisces, engraulididae). Atlântica (Rio Grande), 2759–68. 10.5088/atlântica.v27i1.2210 2005 Model application 16
Aydin, Kerim Y.; McFarlane, Gordon A.; King, Jacquelynne R.; Megrey, Bernard A.; Myers, Katherine W.; 2005. Linking oceanic food webs to coastal production and growth rates of Pacific salmon (Oncorhynchus spp.), using models on three scales. Deep Sea Research Part II: Topical Studies in Oceanography, 52757–780. 10.1016/j.dsr2.2004.12.017 2005 Model application 69
Indrayati, Elis; 2005. Studi Ekosistem Teluk Ekas Melalui Pendekatan Keseimbangan Masa. ILMU KELAUTAN: Indonesian Journal of Marine Sciences, 1085–89. 10.14710/ik.ijms.10.2.85-89 2005 Model application 0
Kruse, G.H.; Gallucci, V.F.; Hay, D.E.; Perry, R.I.; Peterman, R.M.; Shirley, T.C.; Spencer, P.D.; Wilson, B.; Woodby, D.; Ainsworth, C.H.; Pitcher, T,J,; 2005. Using Local Ecological Knowledge in Ecosystem Models. , 289–304. [19] 2005 Model application 27
Haggan, Nigel; Pitcher, Tony; 2005. Ecosystem simulation models of Scotland's West Coast and sea lochs. , . 10.14288/1.0074795 2005 Model application 18
Levner, Eugene; Linkov, Igor; Proth, Jean-Marie; Morissette, Lyne; 2005. Addressing Uncertainty in Marine Ecosystems Modelling. , 50127–142. [20] 2005 Model application 10
Heymans, Johanna J; Shannon, Lynne J; Jarre, Astrid; 2004. Changes in the northern Benguela ecosystem over three decades: 1970s, 1980s, and 1990s. Ecological Modelling, 172175–195. 10.1016/j.ecolmodel.2003.09.006 2004 Model application 181
Granzotto, A.; Libralato, S.; Pranovi, F.; Raicevich, S.; Giovanardi, O.; 2004. Comparison between artisanal and industrial fisheries using ecosystem indicators. Chemistry and Ecology, 20435–449. 10.1080/02757540310001629224 2004 Model application 16
Arreguin-Sanchez, Francisco; Zetina-Rejón, Manuel; Manickchand-Heileman, Sherry; Ramı́rez-Rodrı́guez, Mauricio; Vidal, Laura; 2004. Simulated response to harvesting strategies in an exploited ecosystem in the southwestern Gulf of Mexico. Ecological Modelling, 172421–432. 10.1016/j.ecolmodel.2003.09.016 2004 Model application 43
Plagányi, É. E.; Butterworth, D. S.; 2004. A critical look at the potential of Ecopath with ecosim to assist in practical fisheries management. African Journal of Marine Science, 26261–287. 10.2989/18142320409504061 2004 Model application 199
Zetina-Rejón, M; 2004. Exploration of harvesting strategies for the management of a Mexican coastal lagoon fishery. Ecological Modelling, 172361–372. 10.1016/j.ecolmodel.2003.09.017 2004 Model application 35
Christensen, Villy; Walters, Carl J; 2004. Ecopath with Ecosim: methods, capabilities and limitations. Ecological Modelling, 172109–139. 10.1016/j.ecolmodel.2003.09.003 2004 Model overview 1778
Vidal, Laura; Pauly, Daniel; 2004. Integration of subsystems models as a tool toward describing feeding interactions and fisheries impacts in a large marine ecosystem, the Gulf of Mexico. Ocean & Coastal Management, 47709–725. 10.1016/j.ocecoaman.2004.12.009 2004 Model application 45
Bundy, Alida; 2004. The Ecological Effects of Fishing and Implications for Coastal Management in San Miguel Bay, the Philippines. Coastal Management, 3225–38. 10.1080/08920750490247472 2004 Model application 20
Okey, T; 2004. Simulating community effects of sea floor shading by plankton blooms over the West Florida Shelf. Ecological Modelling, 172339–359. 10.1016/j.ecolmodel.2003.09.015 2004 Model application 91
Gasalla, M.A; Rossi-Wongtschowski, C.L.D.B; 2004. Contribution of ecosystem analysis to investigating the effects of changes in fishing strategies in the South Brazil Bight coastal ecosystem. Ecological Modelling, 172283–306. 10.1016/j.ecolmodel.2003.09.012 2004 Model application 55
Arreguinsanchez, F; 2004. Optimal management scenarios for the artisanal fisheries in the ecosystem of La Paz Bay, Baja California Sur, Mexico*1. Ecological Modelling, 172373–382. 10.1016/j.ecolmodel.2003.09.018 2004 Model application 47
Morales-Zárate, M.V.; Arreguı́n-Sánchez, F.; López-Martı́nez, J.; Lluch-Cota, S.E.; 2004. Ecosystem trophic structure and energy flux in the Northern Gulf of California, México. Ecological Modelling, 174331–345. 10.1016/j.ecolmodel.2003.09.028 2004 Model application 63
Christensen, Villy; Pauly, Daniel; 2004. Placing fisheries in their ecosystem context, an introduction. Ecological Modelling, 172103–107. 10.1016/j.ecolmodel.2003.09.002 2004 Model application 74
Shannon, Lynne J; Field, John G; Moloney, Coleen L; 2004. Simulating anchovy–sardine regime shifts in the southern Benguela ecosystem. Ecological Modelling, 172269–281. 10.1016/j.ecolmodel.2003.09.011 2004 Model application 80
Arias-González, J.Ernesto; Nuñez-Lara, Enrique; González-Salas, Carlos; Galzin, René; 2004. Trophic models for investigation of fishing effect on coral reef ecosystems. Ecological Modelling, 172197–212. 10.1016/j.ecolmodel.2003.09.007 2004 Model application 70
Shin, Y-J.; Shannon, L. J.; Cury, P. M.; 2004. Simulations of fishing effects on the southern Benguela fish community using an individual-based model: learning from a comparison with ECOSIM. African Journal of Marine Science, 2695–114. 10.2989/18142320409504052 2004 Model application 87
Granzotto, Angela; Pranovi, Fabio; Libralato, Simone; Torricelli, Patrizia; Mainardi, Danilo; 2004. Comparison between Artisanal Fishery and Manila Clam Harvesting in the Venice Lagoon by Using Ecosystem Indicators: An Ecological Economics Perspective. SSRN Electronic Journal, . 10.2139/ssrn.588721 2004 Model application 86
Stanford, Richard; Pitcher, Tony; 2004. Ecosystem simulations of the English Channel : climate and trade-offs. , . 10.14288/1.0074799 2004 Model application 31
Zeller, Dirk; Reinert, Jákup; 2004. Modelling spatial closures and fishing effort restrictions in the Faroe Islands marine ecosystem. Ecological Modelling, 172403–420. 10.1016/j.ecolmodel.2003.09.020 2004 Model application 52
Aydin, K. Y.; 2004. Age structure or functional response? Reconciling the energetics of surplus production between single-species models and ECOSIM. African Journal of Marine Science, 26289–301. 10.2989/18142320409504062 2004 Model application 42
Lin, Hsing-Juh; Shao, Kwang-Tsao; Hwang, Jiang-Shiou; Lo, Wen-Tseng; Cheng, I-Jiunn; Lee, Lih-Huwa; 2004. A Trophic Model for Kuosheng Bay in Northern Taiwan. Journal of Marine Science and Technology, 12. 10.51400/2709-6998.2264 2004 Model application 49
Duarte, Luis O; Garcı́a, Camilo B; 2004. Trophic role of small pelagic fishes in a tropical upwelling ecosystem. Ecological Modelling, 172323–338. 10.1016/j.ecolmodel.2003.09.014 2004 Model application 61
Pinnegar, John.K; Polunin, Nicholas V.C; 2004. Predicting indirect effects of fishing in Mediterranean rocky littoral communities using a dynamic simulation model. Ecological Modelling, 172249–267. 10.1016/j.ecolmodel.2003.09.010 2004 Model application 76
Okey, T; 2004. A trophic model of a Galápagos subtidal rocky reef for evaluating fisheries and conservation strategies. Ecological Modelling, 172383–401. 10.1016/j.ecolmodel.2003.09.019 2004 Model application 162
Neira, Sergio; Arancibia, Hugo; 2004. Trophic interactions and community structure in the upwelling system off Central Chile (33–39°S). Journal of Experimental Marine Biology and Ecology, 312349–366. 10.1016/j.jembe.2004.07.011 2004 Model application 72
Kavanagh, Patricia; Newlands, Nathaniel; Christensen, Villy; Pauly, Daniel; 2004. Automated parameter optimization for Ecopath ecosystem models. Ecological Modelling, 172141–149. 10.1016/j.ecolmodel.2003.09.004 2004 Model application 122
Pérez España, Horacio; 2003. Ecological importance of snappers in the stability of modeled coastal ecosystems. Ecological Modelling, 16813–24. 10.1016/S0304-3800(03)00201-1 2003 Model application 12
Robinson, L.A.; Frid, C.L.J.; 2003. Dynamic ecosystem models and the evaluation of ecosystem effects of fishing: can we make meaningful predictions?. Aquatic Conservation: Marine and Freshwater Ecosystems, 135–20. 10.1002/aqc.506 2003 Model application 61
Harvey, Chris J; Cox, Sean P; Essington, Timothy E; Hansson, Sture; Kitchell, James F; 2003. An ecosystem model of food web and fisheries interactions in the Baltic Sea. ICES Journal of Marine Science, 60939–950. 10.1016/S1054-3139(03)00098-5 2003 Model application 166
Latour, Robert J.; Brush, Mark J.; Bonzek, Christopher F.; 2003. Toward Ecosystem-Based Fisheries Management: Strategies for Multispecies Modeling and Associated Data Requirements. Fisheries, 2810–22. [10:TEFM2.0.CO;2 10.1577/1548-8446(2003)28[10:TEFM]2.0.CO;2] 2003 Model application 101
Robinson, L.A.; Frid, C.L.J.; 2003. Dynamic ecosystem models and the evaluation of ecosystem effects of fishing: can we make meaningful predictions?. Aquatic Conservation: Marine and Freshwater Ecosystems, 135–20. 10.1002/aqc.506 2003 Model application 6
Bradford-Grieve, Janet M.; Probert, P.Keith; Nodder, Scott D.; Thompson, David; Hall, Julie; Hanchet, Stuart; Boyd, Philip; Zeldis, John; Baker, Allan N.; Best, Hugh A.; Broekhuizen, Niall; Childerhouse, Simon; Clark, Malcolm; Hadfield, Mark; Safi, Karl; Wilkinson, Ian; 2003. Pilot trophic model for subantarctic water over the Southern Plateau, New Zealand: a low biomass, high transfer efficiency system. Journal of Experimental Marine Biology and Ecology, 289223–262. 10.1016/S0022-0981(03)00045-5 2003 Model application 86
Zeller, Dirk; Booth, Shawn; Mohammed, Elizabeth; Pauly, Daniel; 2003. From Mexico to Brazil : Central Atlantic fisheries catch trends and ecosystem models. , . 10.14288/1.0074792 2003 Model application 39
Arreguı́n-Sánchez, Francisco; Arcos, Enrique; Chávez, Ernesto A.; 2002. Flows of biomass and structure in an exploited benthic ecosystem in the gulf of California, Mexico. Ecological Modelling, 156167–183. 10.1016/S0304-3800(02)00159-X 2002 Model application 81
Okamura, Hiroshi; Yatsu, Akihiko; Hiramatsu, Kazuhiko; 2002. Fisheries management based on ecosystem models: A case study using Ecopath and Ecosim. Fisheries science, 68154–157. 10.2331/fishsci.68.sup1_154 2002 Model application 1
Kitchell, James F.; Essington, Timothy E.; Boggs, Christofer H.; Schindler, Daniel E.; Walters, Carl J.; 2002. The Role of Sharks and Longline Fisheries in a Pelagic Ecosystem of the Central Pacific. Ecosystems, 5202–216. 10.1007/s10021-001-0065-5 2002 Model application 200
Mathisen, Ole A.; Jean Sands, Norma; Haubenstock, Norma; 2002. Trophic ranking of the biota in Iliamna Lake, Alaska. SIL Proceedings, 1922-2010, 281060–1065. 10.1080/03680770.2001.11901880 2002 Model application 0
Cox, Sean P; Essington, Timothy E; Kitchell, James F; Martell, Steven J.D.; Walters, Carl J; Boggs, Christofer; Kaplan, Isaac; 2002. Reconstructing ecosystem dynamics in the central Pacific Ocean, 1952–1998. II. A preliminary assessment of the trophic impacts of fishing and effects on tuna dynamics. Canadian Journal of Fisheries and Aquatic Sciences, 591736–1747. 10.1139/f02-138 2002 Model application 165
Pauly, D.; 2002. 21 Spatial modelling of trophic interactions and fisheries impacts in coastal ecosystems: A case study of Sakumo Lagoon, Ghana. , 11289–xxxv. [21] 2002 Model application 12
Kay, Aran Serenity; 2002. Mysis relicta and kokanee salmon (Oncorhynchus nerka) in Okanagan Lake, British Columbia : from 1970 and into the future. , . 10.14288/1.0074852 2002 Model application 5
Watkinson, Stephen; 2001. Life after death : the importance of salmon carcasses to watershed function. , . 10.14288/1.0074867 2001 Model application 5
Arreguı́n-Sánchez, Francisco; 2000. Octopus–red grouper interaction in the exploited ecosystem of the northern continental shelf of Yucatan, Mexico. Ecological Modelling, 129119–129. 10.1016/S0304-3800(00)00218-0 2000 Model application 40
Pauly, D; 2000. Ecopath, Ecosim, and Ecospace as tools for evaluating ecosystem impact of fisheries. ICES Journal of Marine Science, 57697–706. 10.1006/jmsc.2000.0726 2000 Model application 1068
, ; 2000. A dynamic mass-balance model for marine protected areas. Fish and Fisheries, 194–98. 10.1046/j.1467-2979.2000.00001.x 2000 Model application 38
Shannon, L; 2000. Modelling effects of fishing in the Southern Benguela ecosystem. ICES Journal of Marine Science, 57720–722. 10.1006/jmsc.2000.0716 2000 Model application 98
Whipple, Stuart J; Link, Jason S; Garrison, Lance P; Fogarty, Michael J; 2000. Models of predation and fishing mortality in aquatic ecosystems. Fish and Fisheries, 122–40. 10.1046/j.1467-2979.2000.00007.x 2000 Model application 139
Walters, Carl; Pauly, Daniel; Christensen, Villy; Kitchell, James F.; 2000. Representing Density Dependent Consequences of Life History Strategies in Aquatic Ecosystems: EcoSim II. Ecosystems, 370–83. 10.1007/s100210000011 2000 Model application 317
Kitchell, James F.; Cox, Sean P.; Harvey, Chris J.; Johnson, Timothy B.; Mason, Doran M.; Schoen, Kurt K.; Aydin, Kerim; Bronte, Charles; Ebener, Mark; Hansen, Michael; Hoff, Michael; Schram, Steve; Schreiner, Don; Walters, Carl J.; 2000. Sustainability of the Lake Superior Fish Community: Interactions in a Food Web Context. Ecosystems, 3545–560. 10.1007/s100210000048 2000 Model application 143
Pérez-España, H.; Arreguín-Sánchez, F.; 1999. Complexity related to behavior of stability in mdoeled coastal zone ecosystems. Aquatic Ecosystem Health & Management, 2129–135. 10.1080/14634989908656948 1999 Model application 21
Pitcher, Tony J.; Pauly, Daniel; Hart, Paul J. B.; 1998. Reinventing Fisheries Management. , . [22] 1998 Model application 202
Arreguín‐Sánchez, F.; Manickchand‐Heileman, S.; 1998. The trophic role of lutjanid fish and impacts of their fisheries in two ecosystems in the Gulf of Mexico. Journal of Fish Biology, 53143–153. 10.1111/j.1095-8649.1998.tb01024.x 1998 Model application 31
Bonfil, Ramon; Munro, Gordon; Valtysson, Hreidar Tor; Wright, Miriam; Preikshot, David; Haggan, Nigel; Pauly, Daniel; Sumaila, Ussif Rashid; Pitcher, Tony J.; 1998. Distant water fleets : an ecological, economic and social assessment. , . 10.14288/1.0074783 1998 Model application 60
Walters, Carl; Christensen, Villy; Pauly, Daniel; 1997. Structuring dynamic models of exploited ecosystems from trophic mass-balance assessments. Reviews in Fish Biology and Fisheries, 7139–172. 10.1023/A:1018479526149 1997 Model application 987



Citations

View all

<graph>{{safesubst:#invoke:Graph|chartWrapper}}</graph>
Nr. of publications: 525
Total citations: 20232
h-index: 68
m-quotient: 2.34

Publications per year

View all

<graph>{{safesubst:#invoke:Graph|chartWrapper}}</graph>