Ecopath with Ecosim-Publications

From CSDMS
References Ecopath with Ecosim

Publication(s)YearTypeCited
Colléter, Mathieu; Valls, Audrey; Guitton, Jérôme; Gascuel, Didier; Pauly, Daniel; Christensen, Villy; 2015. Global overview of the applications of the Ecopath with Ecosim modeling approach using the EcoBase models repository. Ecological Modelling, 302, 42–53. 10.1016/j.ecolmodel.2015.01.025
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2015Model application 150
Hossain, Md. Monir; Matsuishi, Takashi; Arhonditsis, George; 2010. Elucidation of ecosystem attributes of an oligotrophic lake in Hokkaido, Japan, using Ecopath with Ecosim (EwE). Ecological Modelling, 221, 1717–1730. 10.1016/j.ecolmodel.2010.03.025
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2010Model application 24
Steenbeek, Jeroen; Buszowski, Joe; Christensen, Villy; Akoglu, Ekin; Aydin, Kerim; Ellis, Nick; Felinto, Dalai; Guitton, Jerome; Lucey, Sean; Kearney, Kelly; Mackinson, Steven; Pan, Mike; Platts, Mark; Walters, Carl; 2016. Ecopath with Ecosim as a model-building toolbox: Source code capabilities, extensions, and variations. Ecological Modelling, 319, 178–189. 10.1016/j.ecolmodel.2015.06.031
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2016Model overview 47
Christensen, Villy; Walters, Carl J; 2004. Ecopath with Ecosim: methods, capabilities and limitations. Ecological Modelling, 172, 109–139. 10.1016/j.ecolmodel.2003.09.003
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2004Model overview 1546
Coll, M.; Akoglu, E.; Arreguín-Sánchez, F.; Fulton, E. A.; Gascuel, D.; Heymans, J. J.; Libralato, S.; Mackinson, S.; Palomera, I.; Piroddi, C.; Shannon, L. J.; Steenbeek, J.; Villasante, S.; Christensen, V.; 2015. Modelling dynamic ecosystems: venturing beyond boundaries with the Ecopath approach. Reviews in Fish Biology and Fisheries, 25, 413–424. 10.1007/s11160-015-9386-x
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2015Model application 60
Smith, Md; Fulton, Ea; Day, Rw; Shannon, Lj; Shin, Y-J; 2015. Ecosystem modelling in the southern Benguela: comparisons of Atlantis, Ecopath with Ecosim, and OSMOSE under fishing scenarios. African Journal of Marine Science, 37, 65–78. 10.2989/1814232X.2015.1013501
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2015Model application 33
Akoglu, E.; Libralato, S.; Salihoglu, B.; Oguz, T.; Solidoro, C.; 2015. EwE-F 1.0: an implementation of Ecopath with Ecosim in Fortran 95/2003 for coupling and integration with other models. Geoscientific Model Development, 8, 2687–2699. 10.5194/gmd-8-2687-2015
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2015Model overview 8
Scott, Erin; Serpetti, Natalia; Steenbeek, Jeroen; Heymans, Johanna Jacomina; 2016. A Stepwise Fitting Procedure for automated fitting of Ecopath with Ecosim models. SoftwareX, 5, 25–30. 10.1016/j.softx.2016.02.002
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2016Model overview 41
Heymans, Johanna Jacomina; Coll, Marta; Link, Jason S.; Mackinson, Steven; Steenbeek, Jeroen; Walters, Carl; Christensen, Villy; 2016. Best practice in Ecopath with Ecosim food-web models for ecosystem-based management. Ecological Modelling, 331, 173–184. 10.1016/j.ecolmodel.2015.12.007
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2016Model application 258
Steele, John H.; Ruzicka, James J.; 2011. Constructing end-to-end models using ECOPATH data. Journal of Marine Systems, 87, 227–238. 10.1016/j.jmarsys.2011.04.005
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2011Model application 42
Plagányi, É. E.; Butterworth, D. S.; 2004. A critical look at the potential of Ecopath with ecosim to assist in practical fisheries management. African Journal of Marine Science, 26, 261–287. 10.2989/18142320409504061
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2004Model application 185
Espinosa-Romero, Maria J.; Gregr, Edward J.; Walters, Carl; Christensen, Villy; Chan, Kai M.A.; 2011. Representing mediating effects and species reintroductions in Ecopath with Ecosim. Ecological Modelling, 222, 1569–1579. 10.1016/j.ecolmodel.2011.02.008
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2011Model application 34
Guesnet, Vanessa; Lassalle, Géraldine; Chaalali, Aurélie; Kearney, Kelly; Saint-Béat, Blanche; Karimi, Battle; Grami, Boutheina; Tecchio, Samuele; Niquil, Nathalie; Lobry, Jérémy; 2015. Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators. Ecological Modelling, 313, 29–40. 10.1016/j.ecolmodel.2015.05.036
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2015Model application 41
Villasante, S.; Arreguín-Sánchez, F.; Heymans, J.J.; Libralato, S.; Piroddi, C.; Christensen, V.; Coll, M.; 2016. Modelling marine ecosystems using the Ecopath with Ecosim food web approach: New insights to address complex dynamics after 30 years of developments. Ecological Modelling, 331, 1–4. 10.1016/j.ecolmodel.2016.04.017
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2016Model application 24
Pauly, D; 2000. Ecopath, Ecosim, and Ecospace as tools for evaluating ecosystem impact of fisheries. ICES Journal of Marine Science, 57, 697–706. 10.1006/jmsc.2000.0726
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2000Model application 979
Walters, Carl; Christensen, Villy; Pauly, Daniel; 1997. [No title found]. Reviews in Fish Biology and Fisheries, 7, 139–172. 10.1023/A:1018479526149
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1997Model application 939
Libralato, Simone; Christensen, Villy; Pauly, Daniel; 2006. A method for identifying keystone species in food web models. Ecological Modelling, 195, 153–171. 10.1016/j.ecolmodel.2005.11.029
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2006Model application 378
Pauly, Daniel; Graham, William; Libralato, Simone; Morissette, Lyne; Deng Palomares, M. L.; 2009. Jellyfish in ecosystems, online databases, and ecosystem models. Hydrobiologia, 616, 67–85. 10.1007/s10750-008-9583-x
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2009Model application 241
Österblom, Henrik; Hansson, Sture; Larsson, Ulf; Hjerne, Olle; Wulff, Fredrik; Elmgren, Ragnar; Folke, Carl; 2007. Human-induced Trophic Cascades and Ecological Regime Shifts in the Baltic Sea. Ecosystems, 10, 877–889. 10.1007/s10021-007-9069-0
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2007Model application 363
Walters, Carl; Pauly, Daniel; Christensen, Villy; Kitchell, James F.; 2000. Representing Density Dependent Consequences of Life History Strategies in Aquatic Ecosystems: EcoSim II. Ecosystems, 3, 70–83. 10.1007/s100210000011
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2000Model application 303
Coll, Marta; Palomera, Isabel; Tudela, Sergi; Sardà, Francesc; 2006. Trophic flows, ecosystem structure and fishing impacts in the South Catalan Sea, Northwestern Mediterranean. Journal of Marine Systems, 59, 63–96. 10.1016/j.jmarsys.2005.09.001
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2006Model application 235
Cheung, William W.L.; Sumaila, U. Rashid; 2008. Trade-offs between conservation and socio-economic objectives in managing a tropical marine ecosystem. Ecological Economics, 66, 193–210. 10.1016/j.ecolecon.2007.09.001
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2008Model application 150
Gascuel, Didier; Pauly, Daniel; 2009. EcoTroph: Modelling marine ecosystem functioning and impact of fishing. Ecological Modelling, 220, 2885–2898. 10.1016/j.ecolmodel.2009.07.031
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2009Model application 74
Zhang, Hongyan; Rutherford, Edward S.; Mason, Doran M.; Breck, Jason T.; Wittmann, Marion E.; Cooke, Roger M.; Lodge, David M.; Rothlisberger, John D.; Zhu, Xinhua; Johnson, Timothy B.; 2016. Forecasting the Impacts of Silver and Bighead Carp on the Lake Erie Food Web. Transactions of the American Fisheries Society, 145, 136–162. 10.1080/00028487.2015.1069211
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2016Model application 54
Coll, Marta; Libralato, Simone; 2012. Contributions of food web modelling to the ecosystem approach to marine resource management in the Mediterranean Sea: Ecosystem approach in the Mediterranean Sea. Fish and Fisheries, 13, 60–88. 10.1111/j.1467-2979.2011.00420.x
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2012Model application 124
Ortiz, Marco; Levins, Richard; Campos, Leonardo; Berrios, Fernando; Campos, Fernando; Jordán, Ferenc; Hermosillo, Brenda; Gonzalez, Jorge; Rodriguez, Fabián; 2013. Identifying keystone trophic groups in benthic ecosystems: Implications for fisheries management. Ecological Indicators, 25, 133–140. 10.1016/j.ecolind.2012.08.020
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2013Model application 48
Christensen, Villy; Coll, Marta; Steenbeek, Jeroen; Buszowski, Joe; Chagaris, Dave; Walters, Carl J.; 2014. Representing Variable Habitat Quality in a Spatial Food Web Model. Ecosystems, 17, 1397–1412. 10.1007/s10021-014-9803-3
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2014Model application 84
de Mutsert, Kim; Steenbeek, Jeroen; Lewis, Kristy; Buszowski, Joe; Cowan, James H.; Christensen, Villy; 2016. Exploring effects of hypoxia on fish and fisheries in the northern Gulf of Mexico using a dynamic spatially explicit ecosystem model. Ecological Modelling, 331, 142–150. 10.1016/j.ecolmodel.2015.10.013
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2016Model application 55
Castellanos-Galindo, Gustavo A.; Cantera, Jaime; Valencia, Natasha; Giraldo, Sebastian; Peña, Enrique; Kluger, Lotta C.; Wolff, Matthias; 2017. Modeling trophic flows in the wettest mangroves of the world: the case of Bahía Málaga in the Colombian Pacific coast. Hydrobiologia, 803, 13–27. 10.1007/s10750-017-3300-6
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2017Model application 13
Ainsworth, C. H.; Samhouri, J. F.; Busch, D. S.; Cheung, W. W. L.; Dunne, J.; Okey, T. A.; 2011. Potential impacts of climate change on Northeast Pacific marine foodwebs and fisheries. ICES Journal of Marine Science, 68, 1217–1229. 10.1093/icesjms/fsr043
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2011Model application 151
Heymans, Johanna J; Shannon, Lynne J; Jarre, Astrid; 2004. Changes in the northern Benguela ecosystem over three decades: 1970s, 1980s, and 1990s. Ecological Modelling, 172, 175–195. 10.1016/j.ecolmodel.2003.09.006
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2004Model application 173
Steenbeek, Jeroen; Coll, Marta; Gurney, Leigh; Mélin, Frédéric; Hoepffner, Nicolas; Buszowski, Joe; Christensen, Villy; 2013. Bridging the gap between ecosystem modeling tools and geographic information systems: Driving a food web model with external spatial–temporal data. Ecological Modelling, 263, 139–151. 10.1016/j.ecolmodel.2013.04.027
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2013Model application 82
Christensen, Villy; Steenbeek, Jeroen; Failler, Pierre; 2011. A combined ecosystem and value chain modeling approach for evaluating societal cost and benefit of fishing. Ecological Modelling, 222, 857–864. 10.1016/j.ecolmodel.2010.09.030
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2011Model application 56
Arias-González, Jesús Ernesto; González-Gándara, Carlos; Luis Cabrera, José; Christensen, Villy; 2011. Predicted impact of the invasive lionfish Pterois volitans on the food web of a Caribbean coral reef. Environmental Research, 111, 917–925. 10.1016/j.envres.2011.07.008
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2011Model application 111
Cox, Sean P; Essington, Timothy E; Kitchell, James F; Martell, Steven J.D.; Walters, Carl J; Boggs, Christofer; Kaplan, Isaac; 2002. Reconstructing ecosystem dynamics in the central Pacific Ocean, 1952–1998. II. A preliminary assessment of the trophic impacts of fishing and effects on tuna dynamics. Canadian Journal of Fisheries and Aquatic Sciences, 59, 1736–1747. 10.1139/f02-138
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2002Model application 155
Kitchell, James F.; Essington, Timothy E.; Boggs, Christofer H.; Schindler, Daniel E.; Walters, Carl J.; 2002. The Role of Sharks and Longline Fisheries in a Pelagic Ecosystem of the Central Pacific. Ecosystems, 5, 202–216. 10.1007/s10021-001-0065-5
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2002Model application 185
Plummer, Mark L.; Harvey, Chris J.; Anderson, Leif E.; Guerry, Anne D.; Ruckelshaus, Mary H.; 2013. The Role of Eelgrass in Marine Community Interactions and Ecosystem Services: Results from Ecosystem-Scale Food Web Models. Ecosystems, 16, 237–251. 10.1007/s10021-012-9609-0
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2013Model application 46
Matsuishi, T.; Muhoozi, L.; Mkumbo, O.; Budeba, Y.; Njiru, M.; Asila, A.; Othina, A.; Cowx, I. G.; 2006. Are the exploitation pressures on the Nile perch fisheries resources of Lake Victoria a cause for concern?. Fisheries Management and Ecology, 13, 53–71. 10.1111/j.1365-2400.2006.00477.x
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2006Model application 106
Ainsworth, C.H.; Pitcher, T.J.; Heymans, J.J.; Vasconcellos, M.; 2008. Reconstructing historical marine ecosystems using food web models: Northern British Columbia from Pre-European contact to present. Ecological Modelling, 216, 354–368. 10.1016/j.ecolmodel.2008.05.005
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2008Model application 50
Fu, Caihong; Xu, Yi; Bundy, Alida; Grüss, Arnaud; Coll, Marta; Heymans, Johanna J.; Fulton, Elizabeth A.; Shannon, Lynne; Halouani, Ghassen; Velez, Laure; Akoglu, Ekin; Lynam, Christopher P.; Shin, Yunne-Jai; 2019. Making ecological indicators management ready: Assessing the specificity, sensitivity, and threshold response of ecological indicators. Ecological Indicators, 105, 16–28. 10.1016/j.ecolind.2019.05.055
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2019Model application 26
Perryman, Holly A.; Tarnecki, Joseph H.; Grüss, Arnaud; Babcock, Elizabeth A.; Sagarese, Skyler R.; Ainsworth, Cameron H.; Gray DiLeone, Alisha M.; 2020. A revised diet matrix to improve the parameterization of a West Florida Shelf Ecopath model for understanding harmful algal bloom impacts. Ecological Modelling, 416, 108890. 10.1016/j.ecolmodel.2019.108890
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2020Model application 1
Christensen, Villy; de la Puente, Santiago; Sueiro, Juan Carlos; Steenbeek, Jeroen; Majluf, Patricia; 2014. Valuing seafood: The Peruvian fisheries sector. Marine Policy, 44, 302–311. 10.1016/j.marpol.2013.09.022
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2014Model application 60
Jacobsen, Nis S.; Essington, Timothy E.; Andersen, Ken H.; Shuter, Brian; 2016. Comparing model predictions for ecosystem-based management. Canadian Journal of Fisheries and Aquatic Sciences, 73, 666–676. 10.1139/cjfas-2014-0561
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2016Model application 20
Christensen, Villy; Walters, Carl J.; Ahrens, Robert; Alder, Jacqueline; Buszowski, Joe; Christensen, Line Bang; Cheung, William W.L.; Dunne, John; Froese, Rainer; Karpouzi, Vasiliki; Kaschner, Kristin; Kearney, Kelly; Lai, Sherman; Lam, Vicki; Palomares, Maria L.D.; Peters-Mason, Aja; Piroddi, Chiara; Sarmiento, Jorge L.; Steenbeek, Jeroen; Sumaila, Rashid; Watson, Reg; Zeller, Dirk; Pauly, Daniel; 2009. Database-driven models of the world's Large Marine Ecosystems. Ecological Modelling, 220, 1984–1996. 10.1016/j.ecolmodel.2009.04.041
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2009Model application 85
Kao, Yu-Chun; Adlerstein, Sara A.; Rutherford, Edward S.; 2016. Assessment of Top-Down and Bottom-Up Controls on the Collapse of Alewives (Alosa pseudoharengus) in Lake Huron. Ecosystems, 19, 803–831. 10.1007/s10021-016-9969-y
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2016Model application 30
Kavanagh, Patricia; Newlands, Nathaniel; Christensen, Villy; Pauly, Daniel; 2004. Automated parameter optimization for Ecopath ecosystem models. Ecological Modelling, 172, 141–149. 10.1016/j.ecolmodel.2003.09.004
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2004Model application 110
Zhao, Changsen; Zhang, Yuan; Yang, Shengtian; Xiang, Hua; Sun, Ying; Yang, Zengyuan; Yu, Qiang; Lim, Richard P.; 2018. Quantifying effects of hydrological and water quality disturbances on fish with food-web modeling. Journal of Hydrology, 560, 1–10. 10.1016/j.jhydrol.2018.03.017
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2018Model application 9
Kadin, Martina; Frederiksen, Morten; Niiranen, Susa; Converse, Sarah J.; 2019. Linking demographic and food‐web models to understand management trade‐offs. Ecology and Evolution, 9, 8587–8600. 10.1002/ece3.5385
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2019Model application 1
Piroddi, Chiara; Giovanni, Bearzi; Villy, Christensen; 2010. Effects of local fisheries and ocean productivity on the northeastern Ionian Sea ecosystem. Ecological Modelling, 221, 1526–1544. 10.1016/j.ecolmodel.2010.03.002
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2010Model application 77
Aydin, Kerim Y.; McFarlane, Gordon A.; King, Jacquelynne R.; Megrey, Bernard A.; Myers, Katherine W.; 2005. Linking oceanic food webs to coastal production and growth rates of Pacific salmon (Oncorhynchus spp.), using models on three scales. Deep Sea Research Part II: Topical Studies in Oceanography, 52, 757–780. 10.1016/j.dsr2.2004.12.017
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2005Model application 102
Harvey, Chris J; Cox, Sean P; Essington, Timothy E; Hansson, Sture; Kitchell, James F; 2003. An ecosystem model of food web and fisheries interactions in the Baltic Sea. ICES Journal of Marine Science, 60, 939–950. 10.1016/S1054-3139(03)00098-5
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2003Model application 156
McGill, Lillian M.; Gerig, Brandon S.; Chaloner, Dominic T.; Lamberti, Gary A.; 2017. An ecosystem model for evaluating the effects of introduced Pacific salmon on contaminant burdens of stream-resident fish. Ecological Modelling, 355, 39–48. 10.1016/j.ecolmodel.2017.03.027
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2017Model application 9
Okey, T; 2004. A trophic model of a Galápagos subtidal rocky reef for evaluating fisheries and conservation strategies. Ecological Modelling, 172, 383–401. 10.1016/j.ecolmodel.2003.09.019
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2004Model application 141
Guénette, Sylvie; Christensen, Villy; D. (Daniel), Pauly; 2017. Fisheries Impacts on North Atlantic Ecosystems : Models and Analyses. , , . 10.14288/1.0348145
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2017Model application 89
Lassalle, G.; Lobry, J.; Le Loc’h, F.; Bustamante, P.; Certain, G.; Delmas, D.; Dupuy, C.; Hily, C.; Labry, C.; Le Pape, O.; Marquis, E.; Petitgas, P.; Pusineri, C.; Ridoux, V.; Spitz, J.; Niquil, N.; 2011. Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management. Progress in Oceanography, 91, 561–575. 10.1016/j.pocean.2011.09.002
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2011Model application 84
Kao, Yu-Chun; Adlerstein, Sara; Rutherford, Edward; 2014. The relative impacts of nutrient loads and invasive species on a Great Lakes food web: An Ecopath with Ecosim analysis. Journal of Great Lakes Research, 40, 35–52. 10.1016/j.jglr.2014.01.010
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2014Model application 39
Coll, Marta; Steenbeek, Jeroen; Sole, Jordi; Palomera, Isabel; Christensen, Villy; 2016. Modelling the cumulative spatial–temporal effects of environmental drivers and fishing in a NW Mediterranean marine ecosystem. Ecological Modelling, 331, 100–114. 10.1016/j.ecolmodel.2016.03.020
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2016Model application 45
Tomczak, M.T.; Niiranen, S.; Hjerne, O.; Blenckner, T.; 2012. Ecosystem flow dynamics in the Baltic Proper—Using a multi-trophic dataset as a basis for food–web modelling. Ecological Modelling, 230, 123–147. 10.1016/j.ecolmodel.2011.12.014
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2012Model application 87
Du, Jianguo; Makatipu, Petrus Christianus; Tao, Lily S.R.; Pauly, Daniel; Cheung, William W.L.; Peristiwady, Teguh; Liao, Jianji; Chen, Bin; 2020. Comparing trophic levels estimated from a tropical marine food web using an ecosystem model and stable isotopes. Estuarine, Coastal and Shelf Science, 233, 106518. 10.1016/j.ecss.2019.106518
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2020Model application 6
Chea, Ratha; Guo, Chuanbo; Grenouillet, Gaël; Lek, Sovan; 2016. Toward an ecological understanding of a flood-pulse system lake in a tropical ecosystem: Food web structure and ecosystem health. Ecological Modelling, 323, 1–11. 10.1016/j.ecolmodel.2015.11.014
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2016Model application 28
Christensen, Villy; Ferdaña, Zach; Steenbeek, Jeroen; 2009. Spatial optimization of protected area placement incorporating ecological, social and economical criteria. Ecological Modelling, 220, 2583–2593. 10.1016/j.ecolmodel.2009.06.029
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2009Model application 58
Goldsworthy, Simon D.; Page, Brad; Rogers, Paul J.; Bulman, Cathy; Wiebkin, Annelise; McLeay, Lachlan J.; Einoder, Luke; Baylis, Alastair M.M.; Braley, Michelle; Caines, Robin; Daly, Keryn; Huveneers, Charlie; Peters, Kristian; Lowther, Andrew D.; Ward, Tim M.; 2013. Trophodynamics of the eastern Great Australian Bight ecosystem: Ecological change associated with the growth of Australia's largest fishery. Ecological Modelling, 255, 38–57. 10.1016/j.ecolmodel.2013.01.006
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2013Model application 52
Surma, Szymon; Pitcher, Tony J.; Kumar, Rajeev; Varkey, Divya; Pakhomov, Evgeny A.; Lam, Mimi E.; Belgrano, Andrea; 2018. Herring supports Northeast Pacific predators and fisheries: Insights from ecosystem modelling and management strategy evaluation. PLOS ONE, 13, e0196307. 10.1371/journal.pone.0196307
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2018Model application 19
Essington, Timothy E; 2007. Evaluating the sensitivity of a trophic mass-balance model (Ecopath) to imprecise data inputs. Canadian Journal of Fisheries and Aquatic Sciences, 64, 628–637. 10.1139/f07-042
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2007Model application 92
Tecchio, Samuele; Coll, Marta; Christensen, Villy; Company, Joan B.; Ramírez-Llodra, Eva; Sardà, Francisco; 2013. Food web structure and vulnerability of a deep-sea ecosystem in the NW Mediterranean Sea. Deep Sea Research Part I: Oceanographic Research Papers, 75, 1–15. 10.1016/j.dsr.2013.01.003
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2013Model application 51
Hutchings, L.; Augustyn, C.J.; Cockcroft, A.; Van der Lingen, C.; Coetzee, J.; Leslie, R. W.; Tarr, R. J.; Oosthuizen, H.; Lipinski, M. R.; Roberts, M. R.; Wilke, C.; Crawford, R.; Shannon, L. J.; Mayekiso, M.; 2010. Marine fisheries monitoring programmes in South Africa. South African Journal of Science, 105, 182. 10.4102/sajs.v105i5/6.85
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2010Model application 24
Wang, Yuyu; Kao, Yu-Chun; Zhou, Yangming; Zhang, Huan; Yu, Xiubo; Lei, Guangchun; 2019. Can water level management, stock enhancement, and fishery restriction offset negative effects of hydrological changes on the four major Chinese carps in China’s largest freshwater lake?. Ecological Modelling, 403, 1–10. 10.1016/j.ecolmodel.2019.03.020
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2019Model application 11
Walters, William J.; Christensen, Villy; 2018. Ecotracer: analyzing concentration of contaminants and radioisotopes in an aquatic spatial-dynamic food web model. Journal of Environmental Radioactivity, 181, 118–127. 10.1016/j.jenvrad.2017.11.008
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2018Model application 16
Baeta, Alexandra; Niquil, Nathalie; Marques, João C.; Patrício, Joana; 2011. Modelling the effects of eutrophication, mitigation measures and an extreme flood event on estuarine benthic food webs. Ecological Modelling, 222, 1209–1221. 10.1016/j.ecolmodel.2010.12.010
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2011Model application 63
Pinnegar, John K.; Blanchard, Julia L.; Mackinson, Steve; Scott, Robert D.; Duplisea, Daniel E.; 2005. Aggregation and removal of weak-links in food-web models: system stability and recovery from disturbance. Ecological Modelling, 184, 229–248. 10.1016/j.ecolmodel.2004.09.003
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2005Model application 121
Langseth, Brian J.; Rogers, Mark; Zhang, Hongyan; 2012. Modeling species invasions in Ecopath with Ecosim: An evaluation using Laurentian Great Lakes models. Ecological Modelling, 247, 251–261. 10.1016/j.ecolmodel.2012.08.015
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2012Model application 41
Walters, Carl; Christensen, Villy; 2019. Effect of non-additivity in mortality rates on predictions of potential yield of forage fishes. Ecological Modelling, 410, 108776. 10.1016/j.ecolmodel.2019.108776
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2019Model application 3
Fourriére, Manon; Alvarado, Juan José; Cortés, Jorge; Taylor, Marc H.; Ayala-Bocos, Arturo; Azofeifa-Solano, Juan Carlos; Arauz, Randall; Heidemeyer, Maike; López-Garro, Andrés; Zanella, Ilena; Wolff, Matthias; 2019. Energy flow structure and role of keystone groups in shallow water environments in Isla del Coco, Costa Rica, Eastern Tropical Pacific. Ecological Modelling, 396, 74–85. 10.1016/j.ecolmodel.2019.01.004
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2019Model application 9
Raoux, Aurore; Tecchio, Samuele; Pezy, Jean-Philippe; Lassalle, Géraldine; Degraer, Steven; Wilhelmsson, Dan; Cachera, Marie; Ernande, Bruno; Le Guen, Camille; Haraldsson, Matilda; Grangeré, Karine; Le Loc’h, François; Dauvin, Jean-Claude; Niquil, Nathalie; 2017. Benthic and fish aggregation inside an offshore wind farm: Which effects on the trophic web functioning?. Ecological Indicators, 72, 33–46. 10.1016/j.ecolind.2016.07.037
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2017Model application 66
Travers, M.; Watermeyer, K.; Shannon, L.J.; Shin, Y.-J.; 2010. Changes in food web structure under scenarios of overfishing in the southern Benguela: Comparison of the Ecosim and OSMOSE modelling approaches. Journal of Marine Systems, 79, 101–111. 10.1016/j.jmarsys.2009.07.005
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2010Model application 71
Surma, Szymon; Pakhomov, Evgeny A.; Pitcher, Tony J.; Hazen, Elliott Lee; 2014. Effects of Whaling on the Structure of the Southern Ocean Food Web: Insights on the “Krill Surplus” from Ecosystem Modelling. PLoS ONE, 9, e114978. 10.1371/journal.pone.0114978
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2014Model application 23
Kumar, Rajeev; Pitcher, Tony J.; Varkey, Divya A.; Belgrano, Andrea; 2017. Ecosystem approach to fisheries: Exploring environmental and trophic effects on Maximum Sustainable Yield (MSY) reference point estimates. PLOS ONE, 12, e0185575. 10.1371/journal.pone.0185575
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2017Model application 3
Chagaris, David D.; Mahmoudi, Behzad; Walters, Carl J.; Allen, Micheal S.; 2015. Simulating the Trophic Impacts of Fishery Policy Options on the West Florida Shelf Using Ecopath with Ecosim. Marine and Coastal Fisheries, 7, 44–58. 10.1080/19425120.2014.966216
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2015Model application 32
Zhang, Chang Ik; Hollowed, Anne Babcock; Lee, Jae-Bong; Kim, Do-Hoon; 2011. An IFRAME approach for assessing impacts of climate change on fisheries. ICES Journal of Marine Science, 68, 1318–1328. 10.1093/icesjms/fsr073
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2011Model application 22
Kitchell, James F.; Cox, Sean P.; Harvey, Chris J.; Johnson, Timothy B.; Mason, Doran M.; Schoen, Kurt K.; Aydin, Kerim; Bronte, Charles; Ebener, Mark; Hansen, Michael; Hoff, Michael; Schram, Steve; Schreiner, Don; Walters, Carl J.; 2000. Sustainability of the Lake Superior Fish Community: Interactions in a Food Web Context. Ecosystems, 3, 545–560. 10.1007/s100210000048
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2000Model application 138
Bevilacqua, Ana Helena V.; Angelini, Ronaldo; Steenbeek, Jeroen; Christensen, Villy; Carvalho, Adriana R.; 2019. Following the Fish: The Role of Subsistence in a Fish-based Value Chain. Ecological Economics, 159, 326–334. 10.1016/j.ecolecon.2019.02.004
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2019Model application 9
Ainsworth, C; Pitcher, T; 2006. Modifying Kempton's species diversity index for use with ecosystem simulation models. Ecological Indicators, 6, 623–630. 10.1016/j.ecolind.2005.08.024
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2006Model application 86
Tierney, Kieran M.; Heymans, Johanna J.; Muir, Graham K.P.; Cook, Gordon T.; Buszowski, Joe; Steenbeek, Jeroen; Walters, William J.; Christensen, Villy; MacKinnon, Gillian; Howe, John A.; Xu, Sheng; 2018. Modelling marine trophic transfer of radiocarbon (14C) from a nuclear facility. Environmental Modelling & Software, 102, 138–154. 10.1016/j.envsoft.2018.01.013
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2018Model application 8
Feng, Jie; Tian, Xiang-Li; Dong, Shuang-Lin; He, Rui-Peng; Zhang, Kai; Zhang, Dong-Xu; Li, Li; Zhang, Qing-Qi; Zhang, Tao; 2018. Comparative analysis of the energy fluxes and trophic structure of polyculture ecosystems of Portunus trituberculatus based on Ecopath model. Aquaculture, 496, 185–196. 10.1016/j.aquaculture.2018.07.020
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2018Model application 6
Metcalfe, Kristian; Vaz, Sandrine; Engelhard, Georg H.; Villanueva, Maria Ching; Smith, Robert J.; Mackinson, Steven; Punt, Andre; 2015. Evaluating conservation and fisheries management strategies by linking spatial prioritization software and ecosystem and fisheries modelling tools. Journal of Applied Ecology, 52, 665–674. 10.1111/1365-2664.12404
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2015Model application 63
Latour, Robert J.; Brush, Mark J.; Bonzek, Christopher F.; 2003. Toward Ecosystem-Based Fisheries Management: Strategies for Multispecies Modeling and Associated Data Requirements. Fisheries, 28, 10–22. [10:TEFM2.0.CO;2 10.1577/1548-8446(2003)28[10:TEFM]2.0.CO;2]
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2003Model application 94
Lassalle, Géraldine; Gascuel, Didier; Le Loc'h, François; Lobry, Jérémy; Pierce, Graham John; Ridoux, Vincent; Santos, Maria Begoña; Spitz, Jérôme; Niquil, Nathalie; 2012. An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study. ICES Journal of Marine Science, 69, 925–938. 10.1093/icesjms/fss049
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2012Model application 64
Forrest, Robyn E.; Savina, Marie; Fulton, Elizabeth A.; Pitcher, Tony J.; 2015. Do marine ecosystem models give consistent policy evaluations? A comparison of Atlantis and Ecosim. Fisheries Research, 167, 293–312. 10.1016/j.fishres.2015.03.010
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2015Model application 29
Booth, Shawn; Walters, William J; Steenbeek, Jeroen; Christensen, Villy; Charmasson, Sabine; 2020. An Ecopath with Ecosim model for the Pacific coast of eastern Japan: Describing the marine environment and its fisheries prior to the Great East Japan earthquake. Ecological Modelling, 428, 109087. 10.1016/j.ecolmodel.2020.109087
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2020Model application 4
Colléter, Mathieu; Valls, Audrey Emilie; Guitton, Jérôme; Morissette, Lyne; Arreguín-Sánchez, Francisco Francisco; Christensen, Villy; D. (Didier), Gascuel; D. (Daniel), Pauly; 2017. EcoBase : A Repository Solution to Gather and Communicate Information from EwE Models. , , . 10.14288/1.0354309
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2017Model application 29
Duan, L.J.; Li, S.Y.; Liu, Y.; Moreau, J.; Christensen, V.; 2009. Modeling changes in the coastal ecosystem of the Pearl River Estuary from 1981 to 1998. Ecological Modelling, 220, 2802–2818. 10.1016/j.ecolmodel.2009.07.016
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2009Model application 34
Steenbeek, Jeroen; Corrales, Xavier; Platts, Mark; Coll, Marta; 2018. Ecosampler: A new approach to assessing parameter uncertainty in Ecopath with Ecosim. SoftwareX, 7, 198–204. 10.1016/j.softx.2018.06.004
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2018Model application 34
Kumar, Rajeev; Varkey, Divya; Pitcher, Tony; 2016. Simulation of zebra mussels (Dreissena polymorpha) invasion and evaluation of impacts on Mille Lacs Lake, Minnesota: An ecosystem model. Ecological Modelling, 331, 68–76. 10.1016/j.ecolmodel.2016.01.019
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2016Model application 19
Coll, M.; Steenbeek, J.; 2017. Standardized ecological indicators to assess aquatic food webs: The ECOIND software plug-in for Ecopath with Ecosim models. Environmental Modelling & Software, 89, 120–130. 10.1016/j.envsoft.2016.12.004
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2017Model application 35
Surma, Szymon; Christensen, Villy; Kumar, Rajeev; Ainsworth, Cameron H.; Pitcher, Tony J.; 2019. High-Resolution Trophic Models Reveal Structure and Function of a Northeast Pacific Ecosystem. Frontiers in Marine Science, 6, 625. 10.3389/fmars.2019.00625
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2019Model application 3
Walters, Carl; Christensen, Villy; 2007. Adding realism to foraging arena predictions of trophic flow rates in Ecosim ecosystem models: Shared foraging arenas and bout feeding. Ecological Modelling, 209, 342–350. 10.1016/j.ecolmodel.2007.06.025
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2007Model application 66
Geers, T.M.; Pikitch, E.K.; Frisk, M.G.; 2016. An original model of the northern Gulf of Mexico using Ecopath with Ecosim and its implications for the effects of fishing on ecosystem structure and maturity. Deep Sea Research Part II: Topical Studies in Oceanography, 129, 319–331. 10.1016/j.dsr2.2014.01.009
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2016Model application 43
Romagnoni, Giovanni; Mackinson, Steven; Hong, Jiang; Eikeset, Anne Maria; 2015. The Ecospace model applied to the North Sea: Evaluating spatial predictions with fish biomass and fishing effort data. Ecological Modelling, 300, 50–60. 10.1016/j.ecolmodel.2014.12.016
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2015Model application 26
Beattie, Alasdair; Sumaila, Ussif Rashid; Christensen, Villy; Pauly, Daniel; 2008. A MODEL FOR THE BIOECONOMIC EVALUATION OF MARINE PROTECTED AREA SIZE AND PLACEMENT IN THE NORTH SEA. Natural Resource Modeling, 15, 413–437. 10.1111/j.1939-7445.2002.tb00096.x
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2008Model application 58
Okey, T; 2004. Simulating community effects of sea floor shading by plankton blooms over the West Florida Shelf. Ecological Modelling, 172, 339–359. 10.1016/j.ecolmodel.2003.09.015
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2004Model application 87
Cerco, Carl F.; Tillman, Dorothy; 2010. Coupling and comparing a spatially- and temporally-detailed eutrophication model with an ecosystem network model: An initial application to Chesapeake Bay. Environmental Modelling & Software, 25, 562–572. 10.1016/j.envsoft.2009.09.008
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2010Model application 34
Bornatowski, Hugo; Angelini, Ronaldo; Coll, Marta; Barreto, Rodrigo R. P.; Amorim, Alberto F.; 2018. Ecological role and historical trends of large pelagic predators in a subtropical marine ecosystem of the South Atlantic. Reviews in Fish Biology and Fisheries, 28, 241–259. 10.1007/s11160-017-9492-z
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2018Model application 22
González, Jorge; Ortiz, Marco; Rodríguez-Zaragoza, Fabián; Ulanowicz, Robert E.; 2016. Assessment of long-term changes of ecosystem indexes in Tongoy Bay (SE Pacific coast): Based on trophic network analysis. Ecological Indicators, 69, 390–399. 10.1016/j.ecolind.2016.04.019
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2016Model application 24
Xu, Shannan; Chen, Zuozhi; Li, Chunhou; Huang, Xiaoping; Li, Shiyu; 2011. Assessing the carrying capacity of tilapia in an intertidal mangrove-based polyculture system of Pearl River Delta, China. Ecological Modelling, 222, 846–856. 10.1016/j.ecolmodel.2010.11.014
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2011Model application 24
Vasslides, James M.; de Mutsert, Kim; Christensen, Villy; Townsend, Howard; 2017. Using the Ecopath with Ecosim Modeling Approach to Understand the Effects of Watershed-based Management Actions in Coastal Ecosystems. Coastal Management, 45, 44–55. 10.1080/08920753.2017.1237241
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2017Model application 7
Hossain, Monir; Stewart, Thomas J.; Arhonditsis, George B.; van Oevelen, Dick; Minns, Charles K.; Koops, Marten A.; 2017. Uncertainty assessment of trophic flows in Hamilton Harbour: A linear inverse modelling analysis. Aquatic Ecosystem Health & Management, 20, 265–277. 10.1080/14634988.2017.1342517
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2017Model application 1
Guo, Chuanbo; Ye, Shaowen; Lek, Sovan; Liu, Jiashou; Zhang, Tanglin; Yuan, Jin; Li, Zhongjie; 2013. The need for improved fishery management in a shallow macrophytic lake in the Yangtze River basin: Evidence from the food web structure and ecosystem analysis. Ecological Modelling, 267, 138–147. 10.1016/j.ecolmodel.2013.07.013
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2013Model application 25
Christensen, Villy; Pauly, Daniel; 2004. Placing fisheries in their ecosystem context, an introduction. Ecological Modelling, 172, 103–107. 10.1016/j.ecolmodel.2003.09.002
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2004Model application 71
Costalago, David; Bauer, Barbara; Tomczak, Maciej T.; Lundström, Karl; Winder, Monika; 2019. The necessity of a holistic approach when managing marine mammal–fisheries interactions: Environment and fisheries impact are stronger than seal predation. Ambio, 48, 552–564. 10.1007/s13280-018-1131-y
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2019Model application 10
Neira, Sergio; Moloney, Coleen; Christensen, Villy; Cury, Philippe; Shannon, Lynne; Arancibia, Hugo; 2014. Analysing changes in the southern Humboldt ecosystem for the period 1970–2004 by means of dynamic food web modelling. Ecological Modelling, 274, 41–49. 10.1016/j.ecolmodel.2013.09.022
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2014Model application 10
Dahood, Adrian; Watters, George M.; de Mutsert, Kim; Cornwall, Christopher Edward; 2019. Using sea-ice to calibrate a dynamic trophic model for the Western Antarctic Peninsula. PLOS ONE, 14, e0214814. 10.1371/journal.pone.0214814
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2019Model application 12
Heymans, Johanna Jacomina; Guénette, Sylvie; Christensen, Villy; 2007. Evaluating Network Analysis Indicators of Ecosystem Status in the Gulf of Alaska. Ecosystems, 10, 488–502. 10.1007/s10021-007-9034-y
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2007Model application 67
Zeller, Dirk; Reinert, Jákup; 2004. Modelling spatial closures and fishing effort restrictions in the Faroe Islands marine ecosystem. Ecological Modelling, 172, 403–420. 10.1016/j.ecolmodel.2003.09.020
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2004Model application 50
Zeng, Zeyu; Cheung, William W. L.; Li, Shiyu; Hu, Jiatang; Wang, Ying; 2019. Effects of climate change and fishing on the Pearl River Estuary ecosystem and fisheries. Reviews in Fish Biology and Fisheries, 29, 861–875. 10.1007/s11160-019-09574-y
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2019Model application 2
de Mutsert, Kim; Lewis, Kristy; Milroy, Scott; Buszowski, Joe; Steenbeek, Jeroen; 2017. Using ecosystem modeling to evaluate trade-offs in coastal management: Effects of large-scale river diversions on fish and fisheries. Ecological Modelling, 360, 14–26. 10.1016/j.ecolmodel.2017.06.029
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2017Model application 33
Sakamoto, Ayaka; Shirakihara, Kunio; 2017. Ecosystem dynamics in Tokyo Bay with a focus on high trophic levels using Ecopath with Ecosim. Journal of Marine Science and Technology, 22, 1–10. 10.1007/s00773-016-0388-8
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2017Model application 6
Heymans, Johanna J.; Tomczak, Maciej T.; 2016. Regime shifts in the Northern Benguela ecosystem: Challenges for management. Ecological Modelling, 331, 151–159. 10.1016/j.ecolmodel.2015.10.027
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2016Model application 36
Patrício, Joana; Marques, João Carlos; 2006. Mass balanced models of the food web in three areas along a gradient of eutrophication symptoms in the south arm of the Mondego estuary (Portugal). Ecological Modelling, 197, 21–34. 10.1016/j.ecolmodel.2006.03.008
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2006Model application 64
Angelini, Ronaldo; Contente, Riguel F.; Rossi-Wongtschowski, Carmem L.D.B.; Soares, Lucy S.H.; Schaeffer-Novelli, Yara; Lopes, Rubens M.; Mancini, Patrícia L.; Coll, Marta; Amaral, Antonia C.Z.; 2018. Ecosystem modeling as a framework to convert a multi-disciplinary research approach into a useful model for the Araçá Bay (Brazil). Ocean & Coastal Management, 164, 92–103. 10.1016/j.ocecoaman.2018.02.007
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2018Model application 9
Whipple, Stuart J; Link, Jason S; Garrison, Lance P; Fogarty, Michael J; 2000. Models of predation and fishing mortality in aquatic ecosystems. Fish and Fisheries, 1, 22–40. 10.1046/j.1467-2979.2000.00007.x
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2000Model application 125
Vilas, Daniel; Coll, Marta; Pedersen, Torstein; Corrales, Xavier; Filbee-Dexter, Karen; Pedersen, Morten Foldager; Norderhaug, Kjell Magnus; Fredriksen, Stein; Wernberg, Thomas; Ramírez-Llodra, Eva; 2020. Kelp-carbon uptake by Arctic deep-sea food webs plays a noticeable role in maintaining ecosystem structural and functional traits. Journal of Marine Systems, 203, 103268. 10.1016/j.jmarsys.2019.103268
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2020Model application 8
Aydin, K. Y.; 2004. Age structure or functional response? Reconciling the energetics of surplus production between single-species models and ECOSIM. African Journal of Marine Science, 26, 289–301. 10.2989/18142320409504062
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2004Model application 40
Cisneros-Montemayor, Andrés M.; Christensen, Villy; Arreguín-Sánchez, Francisco; Sumaila, U. Rashid; 2012. Ecosystem models for management advice: An analysis of recreational and commercial fisheries policies in Baja California Sur, Mexico. Ecological Modelling, 228, 8–16. 10.1016/j.ecolmodel.2011.12.021
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2012Model application 25
Shannon, L; 2000. Modelling effects of fishing in the Southern Benguela ecosystem. ICES Journal of Marine Science, 57, 720–722. 10.1006/jmsc.2000.0716
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2000Model application 96
Bradford-Grieve, Janet M.; Probert, P.Keith; Nodder, Scott D.; Thompson, David; Hall, Julie; Hanchet, Stuart; Boyd, Philip; Zeldis, John; Baker, Allan N.; Best, Hugh A.; Broekhuizen, Niall; Childerhouse, Simon; Clark, Malcolm; Hadfield, Mark; Safi, Karl; Wilkinson, Ian; 2003. Pilot trophic model for subantarctic water over the Southern Plateau, New Zealand: a low biomass, high transfer efficiency system. Journal of Experimental Marine Biology and Ecology, 289, 223–262. 10.1016/S0022-0981(03)00045-5
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2003Model application 78
Pinnegar, John.K; Polunin, Nicholas V.C; 2004. Predicting indirect effects of fishing in Mediterranean rocky littoral communities using a dynamic simulation model. Ecological Modelling, 172, 249–267. 10.1016/j.ecolmodel.2003.09.010
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2004Model application 72
Neira, Sergio; Arancibia, Hugo; 2004. Trophic interactions and community structure in the upwelling system off Central Chile (33–39°S). Journal of Experimental Marine Biology and Ecology, 312, 349–366. 10.1016/j.jembe.2004.07.011
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2004Model application 65
de Mutsert, Kim; Cowan, James H.; Walters, Carl J.; 2012. Using Ecopath with Ecosim to Explore Nekton Community Response to Freshwater Diversion into a Louisiana Estuary. Marine and Coastal Fisheries, 4, 104–116. 10.1080/19425120.2012.672366
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2012Model application 36
Arreguin-Sanchez, Francisco; Zetina-Rejón, Manuel; Ramírez-Rodríguez, Mauricio; 2008. Exploring ecosystem-based harvesting strategies to recover the collapsed pink shrimp (Farfantepenaeus duorarum) fishery in the southern Gulf of Mexico. Ecological Modelling, 214, 83–94. 10.1016/j.ecolmodel.2007.11.021
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2008Model application 22
Megrey, Bernard A.; Moksness, Erlend; Coll, Marta; Bundy, Alida; Shannon, Lynne J.; 2009. Ecosystem Modelling Using the Ecopath with Ecosim Approach. In: (eds.)Computers in Fisheries Research.. 225–291.
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2009Model application 58
M.F. Freire, Kátia; Christensen, Villy; Pauly, Daniel; 2008. Descripción del gran ecosistema marino del noreste de Brasil usando un modelo trófico. Scientia Marina, 72, 477–491. 10.3989/scimar.2008.72n3477
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2008Model application 41
Taylor, Marc H.; Tam, Jorge; Blaskovic, Verónica; Espinoza, Pepe; Michael Ballón, R.; Wosnitza-Mendo, Claudia; Argüelles, Juan; Díaz, Erich; Purca, Sara; Ochoa, Noemi; Ayón, Patricia; Goya, Elisa; Gutiérrez, Dimitri; Quipuzcoa, Luis; Wolff, Matthias; 2008. Trophic modeling of the Northern Humboldt Current Ecosystem, Part II: Elucidating ecosystem dynamics from 1995 to 2004 with a focus on the impact of ENSO. Progress in Oceanography, 79, 366–378. 10.1016/j.pocean.2008.10.008
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2008Model application 65
Watermeyer, Ke; Shannon, Lj; Roux, J-P; Griffiths, Cl; 2008. Changes in the trophic structure of the northern Benguela before and after the onset of industrial fishing. African Journal of Marine Science, 30, 383–403. 10.2989/AJMS.2008.30.2.12.562
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2008Model application 57
Philippsen, Juliana Strieder; Minte-Vera, Carolina V.; Coll, Marta; Angelini, Ronaldo; 2019. Assessing fishing impacts in a tropical reservoir through an ecosystem modeling approach. Reviews in Fish Biology and Fisheries, 29, 125–146. 10.1007/s11160-018-9539-9
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2019Model application 7
Pennino, Maria Grazia; Bevilacqua, Ana Helena; Torres, M. Angeles; Bellido, Jose M.; Sole, Jordi; Steenbeek, Jeroen; Coll, Marta; 2020. Discard ban: A simulation-based approach combining hierarchical Bayesian and food web spatial models. Marine Policy, 116, 103703. 10.1016/j.marpol.2019.103703
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2020Model application 3
Vidal, Laura; Pauly, Daniel; 2004. Integration of subsystems models as a tool toward describing feeding interactions and fisheries impacts in a large marine ecosystem, the Gulf of Mexico. Ocean & Coastal Management, 47, 709–725. 10.1016/j.ocecoaman.2004.12.009
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2004Model application 43
Guénette, Sylvie; Christensen, Villy; Pauly, Daniel; 2008. Trophic modelling of the Peruvian upwelling ecosystem: Towards reconciliation of multiple datasets. Progress in Oceanography, 79, 326–335. 10.1016/j.pocean.2008.10.005
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2008Model application 39
Li, Lingbo; Pitcher, Tony J.; Devlin, Robert H.; 2015. Potential risks of trophic impacts by escaped transgenic salmon in marine environments. Environmental Conservation, 42, 152–161. 10.1017/S0376892914000319
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2015Model application 9
Ma, Hongguang; Townsend, Howard; Zhang, Xinsheng; Sigrist, Maddy; Christensen, Villy; 2010. Using a fisheries ecosystem model with a water quality model to explore trophic and habitat impacts on a fisheries stock: A case study of the blue crab population in the Chesapeake Bay. Ecological Modelling, 221, 997–1004. 10.1016/j.ecolmodel.2009.01.026
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2010Model application 29
Watson, Reg A.; Nowara, Gabrielle B.; Tracey, Sean R.; Fulton, Elizabeth A.; Bulman, Cathy M.; Edgar, Graham J.; Barrett, Neville S.; Lyle, Jeremy M.; Frusher, Stewart D.; Buxton, Colin D.; 2013. Ecosystem model of Tasmanian waters explores impacts of climate-change induced changes in primary productivity. Ecological Modelling, 264, 115–129. 10.1016/j.ecolmodel.2012.05.008
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2013Model application 28
Varkey, Divya; Ainsworth, Cameron H.; Pitcher, Tony J.; 2012. Modelling Reef Fish Population Responses to Fisheries Restrictions in Marine Protected Areas in the Coral Triangle. Journal of Marine Biology, 2012, 1–18. 10.1155/2012/721483
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2012Model application 29
Justic, Dubravko; Rose, Kenneth A.; Hetland, Robert D.; Fennel, Katja; de Mutsert, Kim; Steenbeek, Jeroen; Cowan, James H.; Christensen, Villy; 2017. Using Ecosystem Modeling to Determine Hypoxia Effects on Fish and Fisheries. In: (eds.)Modeling Coastal Hypoxia.. 377–400.
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2017Model application 1
Heymans, Johanna Jacomina; Sumaila, Ussif Rashid; Christensen, Villy; 2009. Policy options for the northern Benguela ecosystem using a multispecies, multifleet ecosystem model. Progress in Oceanography, 83, 417–425. 10.1016/j.pocean.2009.07.013
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2009Model application 31
Heymans, Johanna J.; Howell, Kerry L.; Ayers, Morag; Burrows, Michael T.; Gordon, John D. M.; Jones, Emma G.; Neat, Francis; 2011. Do we have enough information to apply the ecosystem approach to management of deep-sea fisheries? An example from the West of Scotland. ICES Journal of Marine Science, 68, 265–280. 10.1093/icesjms/fsq065
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2011Model application 38
Xu, M; Qi, L; Zhang, Lb; Zhang, T; Yang, Hs; Zhang, Yl; 2019. Ecosystem attributes of trophic models before and after construction of artificial oyster reefs using Ecopath. Aquaculture Environment Interactions, 11, 111–127. 10.3354/aei00284
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2019Model application 4
Chen, Zuozhi; Xu, Shannan; Qiu, Yongsong; Lin, Zhaojin; Jia, Xiaoping; 2009. Modeling the effects of fishery management and marine protected areas on the Beibu Gulf using spatial ecosystem simulation. Fisheries Research, 100, 222–229. 10.1016/j.fishres.2009.08.001
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2009Model application 50
Hoover, Carie; Pitcher, Tony; Christensen, Villy; 2013. Effects of hunting, fishing and climate change on the Hudson Bay marine ecosystem: I. Re-creating past changes 1970–2009. Ecological Modelling, 264, 130–142. 10.1016/j.ecolmodel.2013.02.005
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2013Model application 18
Frisk, M.G.; Miller, T.J.; Latour, R.J.; Martell, S.J.D.; 2011. Assessing biomass gains from marsh restoration in Delaware Bay using Ecopath with Ecosim. Ecological Modelling, 222, 190–200. 10.1016/j.ecolmodel.2010.08.026
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2011Model application 32
Hossain, Monir; Arhonditsis, George B.; Koops, Marten A.; Minns, Charles K.; 2012. Towards the development of an ecosystem model for the Hamilton Harbour, Ontario, Canada. Journal of Great Lakes Research, 38, 628–642. 10.1016/j.jglr.2012.09.015
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2012Model application 15
Shin, Y-J.; Shannon, L. J.; Cury, P. M.; 2004. Simulations of fishing effects on the southern Benguela fish community using an individual-based model: learning from a comparison with ECOSIM. African Journal of Marine Science, 26, 95–114. 10.2989/18142320409504052
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2004Model application 85
Arias-González, J.Ernesto; Nuñez-Lara, Enrique; González-Salas, Carlos; Galzin, René; 2004. Trophic models for investigation of fishing effect on coral reef ecosystems. Ecological Modelling, 172, 197–212. 10.1016/j.ecolmodel.2003.09.007
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2004Model application 67
Robson, Barbara J.; Lester, Rebecca E.; Baldwin, Darren S.; Bond, Nicholas R.; Drouart, Romain; Rolls, Robert J.; Ryder, Darren S.; Thompson, Ross M.; 2017. Modelling food-web mediated effects of hydrological variability and environmental flows. Water Research, 124, 108–128. 10.1016/j.watres.2017.07.031
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2017Model application 19
Tecchio, Samuele; Rius, Armonie Tous; Dauvin, Jean-Claude; Lobry, Jérémy; Lassalle, Géraldine; Morin, Jocelyne; Bacq, Nicolas; Cachera, Marie; Chaalali, Aurélie; Villanueva, Maria Ching; Niquil, Nathalie; 2015. The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis. Ecological Modelling, 312, 91–101. 10.1016/j.ecolmodel.2015.05.026
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2015Model application 34
Kao, Yu-Chun; Rogers, Mark W.; Bunnell, David B.; 2018. Evaluating Stocking Efficacy in an Ecosystem Undergoing Oligotrophication. Ecosystems, 21, 600–618. 10.1007/s10021-017-0173-5
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2018Model application 15
Howell, Evan A.; Wabnitz, Colette C. C.; Dunne, John P.; Polovina, Jeffrey J.; 2013. Climate-induced primary productivity change and fishing impacts on the Central North Pacific ecosystem and Hawaii-based pelagic longline fishery. Climatic Change, 119, 79–93. 10.1007/s10584-012-0597-z
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2013Model application 26
Nascimento, Marcela C.; Velasco, Gonzalo; Okey, Thomas A.; Christensen, Villy; Z. Amaral, A. Cecília; 2011. Trophic model of the outer continental shelf and upper slope demersal community of the southeastern Brazilian Bight. Scientia Marina, 0, . 10.3989/scimar.03359.26A
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2011Model application 11
Fetahi, Tadesse; Mengistou, Seyoum; 2007. Trophic analysis of Lake Awassa (Ethiopia) using mass-balance Ecopath model. Ecological Modelling, 201, 398–408. 10.1016/j.ecolmodel.2006.10.010
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2007Model application 58
Shannon, Lynne J; Field, John G; Moloney, Coleen L; 2004. Simulating anchovy–sardine regime shifts in the southern Benguela ecosystem. Ecological Modelling, 172, 269–281. 10.1016/j.ecolmodel.2003.09.011
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2004Model application 73
Ullah, Md. Hadayet; Rashed-Un-Nabi, Md.; Al-Mamun, Md. Abdulla; 2012. Trophic model of the coastal ecosystem of the Bay of Bengal using mass balance Ecopath model. Ecological Modelling, 225, 82–94. 10.1016/j.ecolmodel.2011.11.013
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2012Model application 36
Niiranen, Susa; Blenckner, Thorsten; Hjerne, Olle; Tomczak, Maciej T.; 2012. Uncertainties in a Baltic Sea Food-Web Model Reveal Challenges for Future Projections. AMBIO, 41, 613–625. 10.1007/s13280-012-0324-z
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2012Model application 24
Morales-Zárate, M.V.; Arreguı́n-Sánchez, F.; López-Martı́nez, J.; Lluch-Cota, S.E.; 2004. Ecosystem trophic structure and energy flux in the Northern Gulf of California, México. Ecological Modelling, 174, 331–345. 10.1016/j.ecolmodel.2003.09.028
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2004Model application 58
Arreguı́n-Sánchez, Francisco; Arcos, Enrique; Chávez, Ernesto A.; 2002. Flows of biomass and structure in an exploited benthic ecosystem in the gulf of California, Mexico. Ecological Modelling, 156, 167–183. 10.1016/S0304-3800(02)00159-X
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2002Model application 77
Robinson, L.A.; Frid, C.L.J.; 2003. Dynamic ecosystem models and the evaluation of ecosystem effects of fishing: can we make meaningful predictions?. Aquatic Conservation: Marine and Freshwater Ecosystems, 13, 5–20. 10.1002/aqc.506
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2003Model application 64
Buchheister, Andre; Miller, Thomas J.; Houde, Edward D.; 2017. Evaluating Ecosystem-Based Reference Points for Atlantic Menhaden. Marine and Coastal Fisheries, 9, 457–478. 10.1080/19425120.2017.1360420
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2017Model application 26
Hoover, Carie; Pitcher, Tony; Christensen, Villy; 2013. Effects of hunting, fishing and climate change on the Hudson Bay marine ecosystem: II. Ecosystem model future projections. Ecological Modelling, 264, 143–156. 10.1016/j.ecolmodel.2013.01.010
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2013Model application 14
Arreguín-Sánchez, Francisco; del Monte-Luna, Pablo; Zetina-Rejón, Manuel J.; 2015. Climate Change Effects on Aquatic Ecosystems and the Challenge for Fishery Management: Pink Shrimp of the Southern Gulf of Mexico. Fisheries, 40, 15–19. 10.1080/03632415.2015.988075
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2015Model application 16
Xu, Shannan; Chen, Zuozhi; Li, Shiyu; He, Peimin; 2011. Modeling Trophic Structure and Energy Flows in a Coastal Artificial Ecosystem Using Mass-Balance Ecopath Model. Estuaries and Coasts, 34, 351–363. 10.1007/s12237-010-9323-0
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2011Model application 35
Libralato, Simone; Solidoro, Cosimo; 2009. Bridging biogeochemical and food web models for an End-to-End representation of marine ecosystem dynamics: The Venice lagoon case study. Ecological Modelling, 220, 2960–2971. 10.1016/j.ecolmodel.2009.08.017
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2009Model application 48
Vasslides, James M.; Jensen, Olaf P.; 2017. Quantitative vs . Semiquantitative Ecosystem Models: Comparing Alternate Representations of an Estuarine Ecosystem. Journal of Coastal Research, 78, 287–296. 10.2112/SI78-020.1
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2017Model application 6
Wang, Ying; Hu, Jianfeng; Pan, Haoran; Li, Shiyu; Failler, Pierre; 2016. An integrated model for marine fishery management in the Pearl River Estuary: Linking socio-economic systems and ecosystems. Marine Policy, 64, 135–147. 10.1016/j.marpol.2015.11.014
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2016Model application 18
Chuenpagdee, Ratana; Liguori, Lisa; Preikshot, Dave; Pauly, Daniel; 2006. A Public Sentiment Index for Ecosystem Management. Ecosystems, 9, 463–473. 10.1007/s10021-006-0105-2
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2006Model application 24
Gasalla, M.A; Rossi-Wongtschowski, C.L.D.B; 2004. Contribution of ecosystem analysis to investigating the effects of changes in fishing strategies in the South Brazil Bight coastal ecosystem. Ecological Modelling, 172, 283–306. 10.1016/j.ecolmodel.2003.09.012
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2004Model application 53
Angelini, Ronaldo; de Morais, Ronny José; Catella, Agostinho Carlos; Resende, Emiko Kawakami; Libralato, Simone; 2013. Aquatic food webs of the oxbow lakes in the Pantanal: A new site for fisheries guaranteed by alternated control?. Ecological Modelling, 253, 82–96. 10.1016/j.ecolmodel.2013.01.001
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2013Model application 25
Guénette, Sylvie; Meissa, Beyah; Gascuel, Didier; Stergiou, Konstantinos I.; 2014. Assessing the Contribution of Marine Protected Areas to the Trophic Functioning of Ecosystems: A Model for the Banc d’Arguin and the Mauritanian Shelf. PLoS ONE, 9, e94742. 10.1371/journal.pone.0094742
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2014Model application 32
Criales-Hernandez, Maria Isabel; Duarte, Luis O.; García, Camilo B.; Manjarrés, Luis; 2006. Ecosystem impacts of the introduction of bycatch reduction devices in a tropical shrimp trawl fishery: Insights through simulation. Fisheries Research, 77, 333–342. 10.1016/j.fishres.2005.10.005
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2006Model application 34
Colléter, M; Walters, Cj; Gatti, P; Gascuel, D; 2015. Including foraging arena and top-down controls improves the modeling of trophic flows and fishing impacts in aquatic food webs. Marine Ecology Progress Series, 534, 17–37. 10.3354/meps11357
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2015Model application 3
Tecchio, Samuele; Coll, Marta; Sardà, Francisco; 2015. Structure, functioning, and cumulative stressors of Mediterranean deep-sea ecosystems. Progress in Oceanography, 135, 156–167. 10.1016/j.pocean.2015.05.018
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2015Model application 9
Ortiz, Marco; 2008. Mass balanced and dynamic simulations of trophic models of kelp ecosystems near the Mejillones Peninsula of northern Chile (SE Pacific): Comparative network structure and assessment of harvest strategies. Ecological Modelling, 216, 31–46. 10.1016/j.ecolmodel.2008.04.006
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2008Model application 49
Bulgakova, T. I.; Bobyrev, A. E.; 2020. The Importance of Trophological Research in Multispecies Fishery Analysis. Biology Bulletin Reviews, 10, 19–27. 10.1134/S207908642001003X
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2020Model application 1
Tesfamichael, Dawit; Pauly, Daniel; 2016. An Exploration of Ecosystem-Based Approaches for the Management of Red Sea Fisheries. In: (eds.)The Red Sea Ecosystem and Fisheries.. 111–134.
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2016Model application 3
Kinter, Bryan T.; Ludsin, Stuart A.; Smith, Ralph; 2013. Nutrient inputs versus piscivore biomass as the primary driver of reservoir food webs. Canadian Journal of Fisheries and Aquatic Sciences, 70, 367–380. 10.1139/cjfas-2012-0369
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2013Model application 7
Bourdaud, Pierre; Gascuel, Didier; Bentorcha, Abdelkrim; Brind’Amour, Anik; 2016. New trophic indicators and target values for an ecosystem-based management of fisheries. Ecological Indicators, 61, 588–601. 10.1016/j.ecolind.2015.10.010
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2016Model application 34
Lewis, K.A.; de Mutsert, K.; Steenbeek, J.; Peele, H.; Cowan, J.H.; Buszowski, J.; 2016. Employing ecosystem models and geographic information systems (GIS) to investigate the response of changing marsh edge on historical biomass of estuarine nekton in Barataria Bay, Louisiana, USA. Ecological Modelling, 331, 129–141. 10.1016/j.ecolmodel.2016.01.017
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2016Model application 16
Arreguinsanchez, F; 2004. Optimal management scenarios for the artisanal fisheries in the ecosystem of La Paz Bay, Baja California Sur, Mexico*1. Ecological Modelling, 172, 373–382. 10.1016/j.ecolmodel.2003.09.018
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2004Model application 46
Choy, Ca; Wabnitz, Ccc; Weijerman, M; Woodworth-Jefcoats, Pa; Polovina, Jj; 2016. Finding the way to the top: how the composition of oceanic mid-trophic micronekton groups determines apex predator biomass in the central North Pacific. Marine Ecology Progress Series, 549, 9–25. 10.3354/meps11680
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2016Model application 26
Wu, Zhongxin; Zhang, Xiumei; Lozano-Montes, Hector M.; Loneragan, Neil R.; 2016. Trophic flows, kelp culture and fisheries in the marine ecosystem of an artificial reef zone in the Yellow Sea. Estuarine, Coastal and Shelf Science, 182, 86–97. 10.1016/j.ecss.2016.08.021
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2016Model application 20
Rogers, Mark W.; Allen, Micheal S.; 2012. An Ecosystem Model for Exploring Lake Restoration Effects on Fish Communities and Fisheries in Florida. Restoration Ecology, 20, 612–622. 10.1111/j.1526-100X.2011.00819.x
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2012Model application 11
Cruz-Escalona, V.H.; Arreguín-Sánchez, F.; Zetina-Rejón, M.; 2007. Analysis of the ecosystem structure of Laguna Alvarado, western Gulf of Mexico, by means of a mass balance model. Estuarine, Coastal and Shelf Science, 72, 155–167. 10.1016/j.ecss.2006.10.013
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2007Model application 48
Ortiz, Marco; Berrios, Fernando; Campos, Leonardo; Uribe, Roberto; Ramirez, Alejandro; Hermosillo-Núñez, Brenda; González, Jorge; Rodriguez-Zaragoza, Fabián; 2015. Mass balanced trophic models and short-term dynamical simulations for benthic ecological systems of Mejillones and Antofagasta bays (SE Pacific): Comparative network structure and assessment of human impacts. Ecological Modelling, 309, 153–162. 10.1016/j.ecolmodel.2015.04.006
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2015Model application 30
Castelblanco-Martínez, Delma Nataly; Barba, Everardo; Schmitter-Soto, Juan Jacobo; Hernández-Arana, Héctor Abuid; Morales-Vela, Benjamín; 2012. The Trophic Role of the Endangered Caribbean Manatee Trichechus manatus in an Estuary with low Abundance of Seagrass. Estuaries and Coasts, 35, 60–77. 10.1007/s12237-011-9420-8
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2012Model application 25
Haputhantri, S.S.K.; Villanueva, M.C.S.; Moreau, J.; 2008. Trophic interactions in the coastal ecosystem of Sri Lanka: An ECOPATH preliminary approach. Estuarine, Coastal and Shelf Science, 76, 304–318. 10.1016/j.ecss.2007.07.013
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2008Model application 24
Neira, Sergio; Arancibia, Hugo; 2013. Food web and fish stock changes in central Chile: comparing the roles of jumbo squid (Dosidicus gigas) predation, the environment, and fisheries. Deep Sea Research Part II: Topical Studies in Oceanography, 95, 103–112. 10.1016/j.dsr2.2013.04.003
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2013Model application 11
Cornejo-Donoso, Jorge; Antezana, Tarsicio; 2008. Preliminary trophic model of the Antarctic Peninsula Ecosystem (Sub-area CCAMLR 48.1). Ecological Modelling, 218, 1–17. 10.1016/j.ecolmodel.2008.06.011
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2008Model application 54
Taylor, Marc H.; Wolff, Matthias; Mendo, Jaime; Yamashiro, Carmen; 2008. Changes in trophic flow structure of Independence Bay (Peru) over an ENSO cycle. Progress in Oceanography, 79, 336–351. 10.1016/j.pocean.2008.10.006
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2008Model application 47
Alexander, Karen A.; Meyjes, Sophie A.; Heymans, Johanna J.; 2016. Spatial ecosystem modelling of marine renewable energy installations: Gauging the utility of Ecospace. Ecological Modelling, 331, 115–128. 10.1016/j.ecolmodel.2016.01.016
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2016Model application 22
Bacalso, Regina Therese M.; Wolff, Matthias; Rosales, Rina Maria; Armada, Nygiel B.; 2016. Effort reallocation of illegal fishing operations: A profitable scenario for the municipal fisheries of Danajon Bank, Central Philippines. Ecological Modelling, 331, 5–16. 10.1016/j.ecolmodel.2016.01.015
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2016Model application 15
Chen, Zuozhi; Qiu, Yongsong; Jia, Xiaoping; Xu, Shannan; 2008. Using an Ecosystem Modeling Approach to Explore Possible Ecosystem Impacts of Fishing in the Beibu Gulf, Northern South China Sea. Ecosystems, 11, 1318–1334. 10.1007/s10021-008-9200-x
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2008Model application 26
Cornwall, Christopher E.; Eddy, Tyler D.; 2015. Effects of near-future ocean acidification, fishing, and marine protection on a temperate coastal ecosystem: Ocean Acidification and Marine Reserves. Conservation Biology, 29, 207–215. 10.1111/cobi.12394
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2015Model application 23
Ayers, Morag J.; Scharler, Ursula M.; 2011. Use of sensitivity and comparative analyses in constructing plausible trophic mass-balance models of a data-limited marine ecosystem — The KwaZulu-Natal Bight, South Africa. Journal of Marine Systems, 88, 298–311. 10.1016/j.jmarsys.2011.05.006
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2011Model application 28
Duarte, Luis O; Garcı́a, Camilo B; 2004. Trophic role of small pelagic fishes in a tropical upwelling ecosystem. Ecological Modelling, 172, 323–338. 10.1016/j.ecolmodel.2003.09.014
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2004Model application 56
Li, Yunkai; Song, Bing; Chen, Yong; Chen, Liqiao; Yu, Na; Olson, Derek; 2010. Changes in the trophic interactions and the community structure of Lake Taihu (China) ecosystem from the 1960s to 1990s. Aquatic Ecology, 44, 337–348. 10.1007/s10452-009-9293-0
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2010Model application 24
Han, Dongyan; Chen, Yong; Zhang, Chongliang; Ren, Yiping; Xue, Ying; Wan, Rong; 2017. Evaluating impacts of intensive shellfish aquaculture on a semi-closed marine ecosystem. Ecological Modelling, 359, 193–200. 10.1016/j.ecolmodel.2017.05.024
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2017Model application 14
Langseth, Brian J.; Jones, Michael L.; Riley, Stephen C.; 2014. The effect of adjusting model inputs to achieve mass balance on time-dynamic simulations in a food-web model of Lake Huron. Ecological Modelling, 273, 44–54. 10.1016/j.ecolmodel.2013.10.027
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2014Model application 6
Neira, Sergio; Moloney, Coleen L.; Cury, Philippe; Mullon, Christian; Christensen, Villy; 2009. Mechanisms affecting recovery in an upwelling food web: The case of the southern Humboldt. Progress in Oceanography, 83, 404–416. 10.1016/j.pocean.2009.07.007
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2009Model application 11
Lin, Qun; Jin, Xianshi; Zhang, Bo; 2013. Trophic interactions, ecosystem structure and function in the southern Yellow Sea. Chinese Journal of Oceanology and Limnology, 31, 46–58. 10.1007/s00343-013-2013-6
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2013Model application 20
, ; 2000. A dynamic mass-balance model for marine protected areas. Fish and Fisheries, 1, 94–98. 10.1046/j.1467-2979.2000.00001.x
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2000Model application 36
Lin, Hsing-Juh; Shao, Kwang-Tsao; Jan, Rong-Quen; Hsieh, Hwey-Lian; Chen, Chang-Po; Hsieh, Li-Yung; Hsiao, Yi-Ting; 2007. A trophic model for the Danshuei River Estuary, a hypoxic estuary in northern Taiwan. Marine Pollution Bulletin, 54, 1789–1800. 10.1016/j.marpolbul.2007.07.008
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2007Model application 31
Arreguin-Sanchez, Francisco; Zetina-Rejón, Manuel; Manickchand-Heileman, Sherry; Ramı́rez-Rodrı́guez, Mauricio; Vidal, Laura; 2004. Simulated response to harvesting strategies in an exploited ecosystem in the southwestern Gulf of Mexico. Ecological Modelling, 172, 421–432. 10.1016/j.ecolmodel.2003.09.016
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2004Model application 43
Vilas, Daniel; Coll, Marta; Corrales, Xavier; Steenbeek, Jeroen; Piroddi, Chiara; Macias, Diego; Ligas, Alessandro; Sartor, Paolo; Claudet, Joachim; 2020. Current and potential contributions of the Gulf of Lion Fisheries Restricted Area to fisheries sustainability in the NW Mediterranean Sea. .
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2020Model application 0
Abascal-Monroy, Isaura Michelle; Zetina-Rejón, Manuel J.; Escobar-Toledo, Fabián; López-Ibarra, Gladis A.; Sosa-López, Atahualpa; Tripp-Valdez, Arturo; 2016. Functional and Structural Food Web Comparison of Terminos Lagoon, Mexico in Three Periods (1980, 1998, and 2011). Estuaries and Coasts, 39, 1282–1293. 10.1007/s12237-015-0054-0
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2016Model application 19
Wang, Ying; Duan, Lijie; Li, Shiyu; Zeng, Zeyu; Failler, Pierre; 2015. Modeling the effect of the seasonal fishing moratorium on the Pearl River Estuary using ecosystem simulation. Ecological Modelling, 312, 406–416. 10.1016/j.ecolmodel.2015.06.011
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2015Model application 12
Alva-Basurto, Jorge Christian; Arias-González, Jesús Ernesto; 2014. Modelling the effects of climate change on a Caribbean coral reef food web. Ecological Modelling, 289, 1–14. 10.1016/j.ecolmodel.2014.06.014
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2014Model application 21
Kluger, Lc; Taylor, Mh; Barriga Rivera, E; Torres Silva, E; Wolff, M; 2016. Assessing the ecosystem impact of scallop bottom culture through a community analysis and trophic modelling approach. Marine Ecology Progress Series, 547, 121–135. 10.3354/meps11652
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2016Model application 15
Bentley, Jacob W.; Serpetti, Natalia; Heymans, Johanna Jacomina; 2017. Investigating the potential impacts of ocean warming on the Norwegian and Barents Seas ecosystem using a time-dynamic food-web model. Ecological Modelling, 360, 94–107. 10.1016/j.ecolmodel.2017.07.002
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2017Model application 26
Rodríguez-Zaragoza, F.A.; Ortiz, M.; Berrios, F.; Campos, L.; de Jesús-Navarrete, A.; Castro-Pérez, J.; Hernández-Flores, A.; García-Rivas, M.; Fonseca-Peralta, F.; Gallegos-Aguilar, E.; 2016. Trophic models and short-term dynamic simulations for benthic-pelagic communities at Banco Chinchorro Biosphere Reserve (Mexican Caribbean): a conservation case. Community Ecology, 17, 48–60. 10.1556/168.2016.17.1.7
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2016Model application 17
Banerjee, Arnab; Banerjee, Moitreyee; Mukherjee, Joyita; Rakshit, Nabyendu; Ray, Santanu; 2016. Trophic relationships and ecosystem functioning of Bakreswar Reservoir, India. Ecological Informatics, 36, 50–60. 10.1016/j.ecoinf.2016.09.006
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2016Model application 20
Ayers, Mj; Scharler, Um; Fennessy, St; 2013. Modelling ecosystem effects of reduced prawn recruitment on the Thukela Bank trawling grounds, South Africa, following nursery loss. Marine Ecology Progress Series, 479, 143–161. 10.3354/meps10192
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2013Model application 14
Ruiz, Diego J.; Banks, Stuart; Wolff, Matthias; 2016. Elucidating fishing effects in a large-predator dominated system: The case of Darwin and Wolf Islands (Galápagos). Journal of Sea Research, 107, 1–11. 10.1016/j.seares.2015.11.001
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2016Model application 15
Moullec, Fabien; Gascuel, Didier; Bentorcha, Karim; Guénette, Sylvie; 2017. Trophic models: What do we learn about Celtic Sea and Bay of Biscay ecosystems?. Journal of Marine Systems, 172, 104–117. 10.1016/j.jmarsys.2017.03.008
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2017Model application 21
Tsehaye, Iyob; Nagelkerke, Leopold A.J.; 2008. Exploring optimal fishing scenarios for the multispecies artisanal fisheries of Eritrea using a trophic model. Ecological Modelling, 212, 319–333. 10.1016/j.ecolmodel.2007.10.044
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2008Model application 32
Lercari, Diego; Defeo, Omar; Ortega, Leonardo; Orlando, Luis; Gianelli, Ignacio; Celentano, Eleonora; 2018. Long-term structural and functional changes driven by climate variability and fishery regimes in a sandy beach ecosystem. Ecological Modelling, 368, 41–51. 10.1016/j.ecolmodel.2017.11.007
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2018Model application 17
Shabtay, Ateret; Portman, Michelle E.; Ofir, Eyal; Carmel, Yohay; Gal, Gideon; 2018. Using ecological modelling in marine spatial planning to enhance ecosystem-based management. Marine Policy, 95, 14–23. 10.1016/j.marpol.2018.06.018
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2018Model application 7
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2020. Ecosystem modelling of data-limited fisheries: How reliable are Ecopath with Ecosim models without historical time series fitting?. Journal of Great Lakes Research, 46, 414–428. 10.1016/j.jglr.2020.01.001
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2020Model application 4
Cruz-Escalona, Víctor H.; Morales-Zárate, María V.; Navia, Andrés F.; Rguez-Baron, Juan M.; Monte-Luna, Pablo del; 2013. Functional analysis of the food web of Bahia Magdalena, Baja California Sur, Mexico. Latin American Journal of Aquatic Research, 41, 519–544. 10.3856/vol41-issue3-fulltext-15
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2013Model application 3
Ainsworth, C. H.; Pitcher, T. J.; 2009. A bioeconomic optimization approach for rebuilding marine communities: British Columbia case study. Environmental Conservation, 36, 301–311. 10.1017/S0376892910000135
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2009Model application 3
Sagarese, Skyler R.; Lauretta, Matthew V.; Walter, John F.; 2017. Progress towards a next-generation fisheries ecosystem model for the northern Gulf of Mexico. Ecological Modelling, 345, 75–98. 10.1016/j.ecolmodel.2016.11.001
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2017Model application 19
Higgins, R.M.; Vandeperre, F.; Pérez-Ruzafa, A.; Santos, R.S.; 2008. Priorities for fisheries in marine protected area design and management: Implications for artisanal-type fisheries as found in southern Europe. Journal for Nature Conservation, 16, 222–233. 10.1016/j.jnc.2008.09.001
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2008Model application 22
Bentorcha, Abdelkrim; Gascuel, Didier; Guénette, Sylvie; 2017. Using trophic models to assess the impact of fishing in the Bay of Biscay and the Celtic Sea. Aquatic Living Resources, 30, 7. 10.1051/alr/2017006
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2017Model application 10
Abdou, Khaled; Le Loc’h, François; Gascuel, Didier; Romdhane, Mohamed Salah; Aubin, Joël; Ben Rais Lasram, Frida; 2020. Combining ecosystem indicators and life cycle assessment for environmental assessment of demersal trawling in Tunisia. The International Journal of Life Cycle Assessment, 25, 105–119. 10.1007/s11367-019-01651-5
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2020Model application 5
Adebola, Tunde; de Mutsert, Kim; 2019. Compartive network analyses for Nigerian coastal waters using two ecopath models developed for the years 1985 and 2000. Fisheries Research, 213, 33–41. 10.1016/j.fishres.2018.12.028
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2019Model application 2
Arreguı́n-Sánchez, Francisco; 2000. Octopus–red grouper interaction in the exploited ecosystem of the northern continental shelf of Yucatan, Mexico. Ecological Modelling, 129, 119–129. 10.1016/S0304-3800(00)00218-0
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2000Model application 36
Ofir, E.; Heymans, J.J.; Shapiro, J.; Goren, M.; Spanier, E.; Gal, G.; 2017. Predicting the impact of Lake Biomanipulation based on food-web modeling—Lake Kinneret as a case study. Ecological Modelling, 348, 14–24. 10.1016/j.ecolmodel.2016.12.019
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2017Model application 9
Li, Chun-hua; Xian, Yi; Ye, Chun; Wang, Yan-hua; Wei, Wei-wei; Xi, Hai-yan; Zheng, Bing-hui; 2019. Wetland ecosystem status and restoration using the Ecopath with Ecosim (EWE) model. Science of The Total Environment, 658, 305–314. 10.1016/j.scitotenv.2018.12.128
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2019Model application 9
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2018. Ecosystem models of Lake Victoria (East Africa): exploring the sensitivity of ecosystem effects of fishing to model choice. .
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2018Model application 0
Ortiz, Marco; 2010. Dynamic and spatial models of kelp forest of Macrocystis integrifolia and Lessonia trabeculata (SE Pacific) for assessment harvest scenarios: short-term responses. Aquatic Conservation: Marine and Freshwater Ecosystems, 20, 494–506. 10.1002/aqc.1126
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2010Model application 32
Gray DiLeone, A.M.; Ainsworth, C.H.; 2019. Effects of Karenia brevis harmful algal blooms on fish community structure on the West Florida Shelf. Ecological Modelling, 392, 250–267. 10.1016/j.ecolmodel.2018.11.022
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2019Model application 12
Ortiz, Marco; Campos, Leonardo; Berrios, Fernando; Rodriguez, Fabián; Hermosillo, Brenda; González, Jorge; 2013. Network properties and keystoneness assessment in different intertidal communities dominated by two ecosystem engineer species (SE Pacific coast): A comparative analysis. Ecological Modelling, 250, 307–318. 10.1016/j.ecolmodel.2012.10.014
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2013Model application 32
Guénette, Sylvie; Hill, Ronald L.; 2009. A trophic model of the coral reef ecosystem of La Parguera, Puerto Rico: synthesizing fisheries and ecological data. Caribbean Journal of Science, 45, 317–337. 10.18475/cjos.v45i2.a17
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2009Model application 6
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2020. Simulating trade-offs between socio-economic and conservation objectives for Lake Victoria (East Africa) using multispecies, multifleet ecosystem models. Fisheries Research, 229, 105593. 10.1016/j.fishres.2020.105593
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2020Model application 0
de Haast, James A.; Treasure, Anne M.; Ruzicka, James J.; Moloney, Coleen L.; 2018. A donor-driven approach to modelling anchovy-sardine dominance shifts in the southern Benguela ecosystem. Journal of Marine Systems, 188, 117–132. 10.1016/j.jmarsys.2017.09.001
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2018Model application 2
Chen, Zuozhi; Xu, Shannan; Qiu, Yongsong; 2015. Using a food-web model to assess the trophic structure and energy flows in Daya Bay, China. Continental Shelf Research, 111, 316–326. 10.1016/j.csr.2015.08.013
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2015Model application 18
Wang, Y.; Li, S.Y.; Duan, L.J.; Liu, Y.; 2012. Fishery policy exploration in the Pearl River Estuary based on an Ecosim model. Ecological Modelling, 230, 34–43. 10.1016/j.ecolmodel.2012.01.017
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2012Model application 21
Zetina-Rejón, M; 2004. Exploration of harvesting strategies for the management of a Mexican coastal lagoon fishery. Ecological Modelling, 172, 361–372. 10.1016/j.ecolmodel.2003.09.017
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2004Model application 34
Natugonza, Vianny; Ogutu-Ohwayo, Richard; Musinguzi, Laban; Kashindye, Benedicto; Jónsson, Steingrímur; Valtysson, Hreidar Thor; 2016. Exploring the structural and functional properties of the Lake Victoria food web, and the role of fisheries, using a mass balance model. Ecological Modelling, 342, 161–174. 10.1016/j.ecolmodel.2016.10.002
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2016Model application 11
Natugonza, Vianny; Ainsworth, Cameron; Sturludóttir, Erla; Musinguzi, Laban; Ogutu-Ohwayo, Richard; Tomasson, Tumi; Nyamweya, Chrisphine; Stefansson, Gunnar; 2019. Ecosystem models of Lake Victoria (East Africa): Can Ecopath with Ecosim and Atlantis predict similar policy outcomes?. Journal of Great Lakes Research, 45, 1260–1273. 10.1016/j.jglr.2019.09.018
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2019Model application 4
Harvey, Chris J.; Rose, Kenneth; 2014. Mediation functions in Ecopath with Ecosim: handle with care. Canadian Journal of Fisheries and Aquatic Sciences, 71, 1020–1029. 10.1139/cjfas-2013-0594
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2014Model application 11
Trites, A.W.; Livingston, P.A.; Vasconcellos, M.C.; Mackinson, S.; Springer, A.M.; Pauly, D.; 1999. Ecosystem Considerations and the Limitations of Ecosystem Models in Fisheries Management:Insights from the Bering Sea. . Volume .
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1999Model application 39
Adebola, Tunde; Mutsert, Kim; 2019. Spatial simulation of redistribution of fishing effort in Nigerian coastal waters using Ecospace. Ecosphere, 10, e02623. 10.1002/ecs2.2623
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2019Model application 3
Ortiz, Marco; Avendaño, Miguel; Campos, Leonardo; Berrios, Fernando; 2009. Spatial and mass balanced trophic models of La Rinconada Marine Reserve (SE Pacific coast), a protected benthic ecosystem: Management strategy assessment. Ecological Modelling, 220, 3413–3423. 10.1016/j.ecolmodel.2009.08.020
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2009Model application 24
Lin, H.-J.; Shao, K.-T.; Hsieh, H.-L.; Lo, W.-T.; Dai, X.-X.; 2009. The effects of system-scale removal of oyster-culture racks from Tapong Bay, southwestern Taiwan: model exploration and comparison with field observations. ICES Journal of Marine Science, 66, 797–810. 10.1093/icesjms/fsp078
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2009Model application 17
Lachica-Aliño, Lualhati; Wolff, Matthias; David, Laura T.; 2006. Past and future fisheries modeling approaches in the Philippines. Reviews in Fish Biology and Fisheries, 16, 201–212. 10.1007/s11160-006-9008-8
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2006Model application 15
Jia, Peiqiao; Hu, Menghong; Hu, Zhongjun; Liu, Qigen; Wu, Zhen; 2012. Modeling trophic structure and energy flows in a typical macrophyte dominated shallow lake using the mass balanced model. Ecological Modelling, 233, 26–30. 10.1016/j.ecolmodel.2012.02.026
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2012Model application 24
Duan, L.J.; Li, S.Y.; Liu, Y.; Jiang, T.; Failler, P.; 2009. A trophic model of the Pearl River Delta coastal ecosystem. Ocean & Coastal Management, 52, 359–367. 10.1016/j.ocecoaman.2009.04.005
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2009Model application 26
Dimarchopoulou, Donna; Keramidas, Ioannis; Tsagarakis, Konstantinos; Tsikliras, Athanassios C.; 2019. Ecosystem Models and Effort Simulations of an Untrawled Gulf in the Central Aegean Sea. Frontiers in Marine Science, 6, 648. 10.3389/fmars.2019.00648
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2019Model application 8
Antony, P.J.; Dhanya, S.; Lyla, P.S.; Kurup, B.M.; Ajmal Khan, S.; 2010. Ecological role of stomatopods (mantis shrimps) and potential impacts of trawling in a marine ecosystem of the southeast coast of India. Ecological Modelling, 221, 2604–2614. 10.1016/j.ecolmodel.2010.07.017
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2010Model application 13
Ocampo Reinaldo, Matías; Milessi, Andrés C.; Romero, María Alejandra; Crespo, Enrique; Wolff, Matthias; González, Raúl A.; 2016. Assessing the effects of demersal fishing and conservation strategies of marine mammals over a Patagonian food web. Ecological Modelling, 331, 31–43. 10.1016/j.ecolmodel.2015.10.025
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2016Model application 8
Gartner, Adam; Lavery, Paul S.; Lonzano-Montes, Hector; 2015. Trophic implications and faunal resilience following one-off and successive disturbances to an Amphibolis griffithii seagrass system. Marine Pollution Bulletin, 94, 131–143. 10.1016/j.marpolbul.2015.03.001
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2015Model application 5
Fulton, E.A.; Bulman, C.M.; Pethybridge, H.; Goldsworthy, S.D.; 2018. Modelling the Great Australian Bight Ecosystem. Deep Sea Research Part II: Topical Studies in Oceanography, 157, 211–235. 10.1016/j.dsr2.2018.11.002
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2018Model application 9
Pavés, Héctor J.; González, Humberto E.; 2008. Carbon fluxes within the pelagic food web in the coastal area off Antofagasta (23°S), Chile: The significance of the microbial versus classical food webs. Ecological Modelling, 212, 218–232. 10.1016/j.ecolmodel.2007.10.004
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2008Model application 25
McGregor, Andrea M.; Davis, Christopher L.; Walters, Carl J.; Foote, Lee; 2015. Fisheries restoration potential for a large lake ecosystem: using ecosystem models to examine dynamic relationships between walleye, cormorant, and perch. Ecology and Society, 20, art29. 10.5751/ES-07350-200229
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2015Model application 1
Angelini, Ronaldo; Agostinho, Angelo Antonio; Gomes, Luiz Carlos; 2006. Modeling energy flow in a large Neotropical reservoir: a tool do evaluate fishing and stability. Neotropical Ichthyology, 4, 253–260. 10.1590/S1679-62252006000200011
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2006Model application 22
Moutopoulos, Dimitrios K.; Stoumboudi, Maria Th.; Ramfos, Alexis; Tsagarakis, Konstantinos; Gritzalis, Konstantinos C.; Petriki, Olga; Patsia, Athina; Barbieri, Roberta; Machias, Athanasios; Stergiou, Konstantinos I.; Bobori, Dimitra C.; 2018. Food web modelling on the structure and functioning of a Mediterranean lentic system. Hydrobiologia, 822, 259–283. 10.1007/s10750-018-3685-x
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2018Model application 1
Chen, Zuozhi; Qiu, Yongsong; Jia, Xiaoping; Xu, Shannan; 2008. Simulating fisheries management options for the Beibu Gulf by means of an ecological modelling optimization routine. Fisheries Research, 89, 257–265. 10.1016/j.fishres.2007.09.004
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2008Model application 19
Musinguzi, Laban; Natugonza, Vianny; Ogutu-Ohwayo, Richard; 2017. Paradigm shifts required to promote ecosystem modeling for ecosystem-based fishery management for African inland lakes. Journal of Great Lakes Research, 43, 1–8. 10.1016/j.jglr.2016.11.007
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2017Model application 9
Thapanand, Thanitha; Moreau, Jacques; Jutagate, Tuantong; Wongrat, Prachit; Lekchonlayut, Teera; Meksumpun, Charumas; Janekitkarn, Sommai; Rodloi, Arunee; Dulyapruk, Varunthat; Wongrat, Ladda; 2007. Towards possible fishery management strategies in a newly impounded man-made lake in Thailand. Ecological Modelling, 204, 143–155. 10.1016/j.ecolmodel.2006.12.041
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2007Model application 18
Cremona, Fabien; Järvalt, Ain; Bhele, Upendra; Timm, Henn; Seller, Siim; Haberman, Juta; Zingel, Priit; Agasild, Helen; Nõges, Peeter; Nõges, Tiina; 2018. Relationships between fisheries, foodweb structure, and detrital pathway in a large shallow lake. Hydrobiologia, 820, 145–163. 10.1007/s10750-018-3648-2
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2018Model application 10
Levner, Eugene; Linkov, Igor; Proth, Jean-Marie; Morissette, Lyne; 2005. Addressing Uncertainty in Marine Ecosystems Modelling. In: (eds.)Strategic Management of Marine Ecosystems.. 127–142.
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2005Model application 12
Warren, D. R.; Harvey, C. J.; McClure, M. M.; Sanderson, B. L.; 2014. Use of an Ecosystem-Based Model to Evaluate Alternative Conservation Strategies for Juvenile Chinook Salmon in a Headwater Stream. North American Journal of Fisheries Management, 34, 839–852. 10.1080/02755947.2014.910574
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2014Model application 7
Chen, Zuozhi; Xu, Shannan; He, Peimin; 2011. An ecological model of the artificial ecosystem (northern Hangzhou Bay, China): analysis of ecosystem structure and fishing impacts. Helgoland Marine Research, 65, 217–231. 10.1007/s10152-010-0218-z
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2011Model application 13
Medina, Marianela; Arancibia, Hugo; Neira, Sergio; 2007. A preliminary trophic model of the pelagic ecosystem in northern Chile (18°20’S-24°00’S). Investigaciones marinas, 35, 25–38. 10.4067/S0717-71782007000100003
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2007Model application 14
Haro, Daniela; Sabat, Pablo; Arreguín-Sánchez, Francisco; Neira, Sergio; Hernández-Padilla, Juan Carlos; 2020. Trophic role of the humpback whale (Megaptera novaeangliae) in the feeding area of Magellan Strait, Chile. Ecological Indicators, 109, 105796. 10.1016/j.ecolind.2019.105796
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2020Model application 3
Lozano-Montes, Hector; Loneragan, Neil R.; Babcock, Russ; Caputi, Nick; 2013. Evaluating the ecosystem effects of variation in recruitment and fishing effort in the western rock lobster fishery. Fisheries Research, 145, 128–135. 10.1016/j.fishres.2013.01.009
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2013Model application 8
Ortiz, Marco; Avendaño, Miguel; Cantillañez, Marcela; Berrios, Fernando; Campos, Leonardo; 2009. Trophic mass balanced models and dynamic simulations of benthic communities from La Rinconada Marine Reserve off northern Chile: network properties and multispecies harvest scenario assessments. Aquatic Conservation: Marine and Freshwater Ecosystems, , n/a–n/a. 10.1002/aqc.1047
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2009Model application 26
Yang, S.; Pan, T.; Wang, X.; Sun, Y.; Zhang, Y.; Zhao, C.; Gai, Y.; Wang, Z.; Zhang, H.; 2019. Dominant aquatic species and their hydrological niches in freshwater ecosystems in a developing city. Marine and Freshwater Research, 70, 615. 10.1071/MF18336
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2019Model application 1
Han, Dongyan; Xue, Ying; Zhang, Chongliang; Ren, Yiping; 2017. A mass balanced model of trophic structure and energy flows of a semi-closed marine ecosystem. Acta Oceanologica Sinica, 36, 60–69. 10.1007/s13131-017-1071-6
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2017Model application 11
Arreguín‐Sánchez, F.; Manickchand‐Heileman, S.; 1998. The trophic role of lutjanid fish and impacts of their fisheries in two ecosystems in the Gulf of Mexico. Journal of Fish Biology, 53, 143–153. 10.1111/j.1095-8649.1998.tb01024.x
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1998Model application 28
Bhele, Upendra; Öğlü, Burak; Tuvikene, Arvo; Bernotas, Priit; Silm, Maidu; Järvalt, Ain; Agasild, Helen; Zingel, Priit; Seller, Siim; Timm, Henn; Nõges, Peeter; Nõges, Tiina; Cremona, Fabien; 2020. How long-term water level changes influence the spatial distribution of fish and other functional groups in a large shallow lake. Journal of Great Lakes Research, , S0380133020300472. 10.1016/j.jglr.2020.02.010
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2020Model application 3
Angelini, Ronaldo; Vaz-Velho, Filomena; 2010. Ecosystem structure and trophic analysis of Angolan fishery landings. Scientia Marina, 75, 309–319. 10.3989/scimar.2011.75n2309
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2010Model application 17
Sánchez-Jiménez, Astrid; Fujitani, Marie; MacMillan, Douglas; Schlüter, Achim; Wolff, Matthias; 2019. Connecting a Trophic Model and Local Ecological Knowledge to Improve Fisheries Management: The Case of Gulf of Nicoya, Costa Rica. Frontiers in Marine Science, 6, 126. 10.3389/fmars.2019.00126
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2019Model application 8
Li, Yunkai; Zhang, Yuying; 2012. Fisheries impact on the East China Sea Shelf ecosystem for 1969–2000. Helgoland Marine Research, 66, 371–383. 10.1007/s10152-011-0278-8
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2012Model application 5
Murawski, Steven A.; Ainsworth, Cameron H.; Gilbert, Sherryl; Hollander, David J.; Paris, Claire B.; Schlüter, Michael; Wetzel, Dana L.; Suprenand, Paul M.; Hoover, Carie; Dornberger, Lindsey N.; Johnson, Chris J.; 2020. Preparing for the Inevitable: Ecological and Indigenous Community Impacts of Oil Spill-Related Mortality in the United States’ Arctic Marine Ecosystem. In: (eds.)Scenarios and Responses to Future Deep Oil Spills.. 470–493.
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2020Model application 2
Granzotto, A.; Libralato, S.; Pranovi, F.; Raicevich, S.; Giovanardi, O.; 2004. Comparison between artisanal and industrial fisheries using ecosystem indicators. Chemistry and Ecology, 20, 435–449. 10.1080/02757540310001629224
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2004Model application 16
Barros, Monica E.; Neira, Sergio; Arancibia, Hugo; 2014. Trophic interactions in northern Chile upwelling ecosystem, year 1997. Latin American Journal of Aquatic Research, 42, 1109–1125. 10.3856/vol42-issue5-fulltext-15
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2014Model application 2
Argüelles-Jiménez, Jimmy; Alva-Basurto, Jorge Christian; Pérez-España, Horacio; Zetina-Rejón, Manuel J.; Arias-González, Jesús Ernesto; 2020. The measurement of ecosystem development in Caribbean coral reefs through topological indices. Ecological Indicators, 110, 105866. 10.1016/j.ecolind.2019.105866
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2020Model application 3
Feng, Jianfeng; Wang, Hongli; Huang, Dongwei; Li, Shengpeng; 2006. Alternative attractors in marine ecosystems: A comparative analysis of fishing effects. Ecological Modelling, 195, 377–384. 10.1016/j.ecolmodel.2005.11.033
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2006Model application 10
Canziani, Gonzalo Velasco; Castello, Jorge Pablo; 2005. An ecotrophic model of southern Brazil continental shelf and fisheries scenarios for engraulis anchoita (Pisces, engraulididae). Atlântica (Rio Grande), 27, 59–68. 10.5088/atlântica.v27i1.2210
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2005Model application 13
Bundy, Alida; 2004. The Ecological Effects of Fishing and Implications for Coastal Management in San Miguel Bay, the Philippines. Coastal Management, 32, 25–38. 10.1080/08920750490247472
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2004Model application 17
Morissette, Lyne; Pedersen, Torstein; Nilsen, Marianne; 2009. Comparing pristine and depleted ecosystems: The Sørfjord, Norway versus the Gulf of St. Lawrence, Canada. Effects of intense fisheries on marine ecosystems. Progress in Oceanography, 81, 174–187. 10.1016/j.pocean.2009.04.013
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2009Model application 14
Sandberg, J.; Kumblad, L.; Kautsky, U.; 2007. Can ECOPATH with ECOSIM enhance models of radionuclide flows in food webs? – an example for 14C in a coastal food web in the Baltic Sea. Journal of Environmental Radioactivity, 92, 96–111. 10.1016/j.jenvrad.2006.09.010
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2007Model application 12
Han, Dongyan; Chen, Yong; Zhang, Chongliang; Ren, Yiping; Xu, Binduo; Xue, Ying; 2018. Evaluation of effects of shellfish aquaculture and capture fishery on a semi-closed bay ecosystem. Estuarine, Coastal and Shelf Science, 207, 175–182. 10.1016/j.ecss.2018.04.005
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2018Model application 7
Giralt Paradell, Oriol; Díaz López, Bruno; Methion, Séverine; Rogan, Emer; 2020. Food-web interactions in a coastal ecosystem influenced by upwelling and terrestrial runoff off North-West Spain. Marine Environmental Research, 157, 104933. 10.1016/j.marenvres.2020.104933
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2020Model application 3
Pauly, D.; 2002. 21 Spatial modelling of trophic interactions and fisheries impacts in coastal ecosystems: A case study of Sakumo Lagoon, Ghana. In: (eds.)Large Marine Ecosystems.. 289–xxxv.
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2002Model application 12
Zhang, Chang-Ik; Seo, Young-Il; Kang, Hee-Joong; Lim, Jung-Hyun; 2019. Exploitable carrying capacity and potential biomass yield of sectors in the East China Sea, Yellow Sea, and East Sea/Sea of Japan large marine ecosystems. Deep Sea Research Part II: Topical Studies in Oceanography, 163, 16–28. 10.1016/j.dsr2.2018.11.016
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2019Model application 3
Ortiz, Marco; Wolff, Matthias; 2008. Mass-balanced trophic and loop models of complex benthic systems in northern Chile (SE Pacific) to improve sustainable interventions: a comparative analysis. Hydrobiologia, 605, 1–10. 10.1007/s10750-008-9362-8
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2008Model application 12
Bumbeer, Janaína; da Rocha, Rosana Moreira; Bornatowski, Hugo; Robert, Maurício de Castro; Ainsworth, Cameron; 2018. Predicting impacts of lionfish (Pterois volitans) invasion in a coastal ecosystem of southern Brazil. Biological Invasions, 20, 1257–1274. 10.1007/s10530-017-1625-8
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2018Model application 11
Lee, Sung Il; Zhang, Chang Ik; 2018. Evaluation of the Effect of Marine Ranching Activities on the Tongyeong Marine Ecosystem. Ocean Science Journal, 53, 557–582. 10.1007/s12601-018-0045-8
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2018Model application 11
Lucey, Sean M.; Gaichas, Sarah K.; Aydin, Kerim Y.; 2020. Conducting reproducible ecosystem modeling using the open source mass balance model Rpath. Ecological Modelling, 427, 109057. 10.1016/j.ecolmodel.2020.109057
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2020Model application 6
Pérez-España, H.; Arreguín-Sánchez, F.; 1999. Complexity related to behavior of stability in mdoeled coastal zone ecosystems. Aquatic Ecosystem Health & Management, 2, 129–135. 10.1080/14634989908656948
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1999Model application 20
Metcalf, Sarah J.; 2010. Qualitative Models to Complement Quantitative Ecosystem Models for the Analysis of Data-Limited Marine Ecosystems and Fisheries. Reviews in Fisheries Science, 18, 248–265. 10.1080/10641262.2010.505670
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2010Model application 11
Papapanagiotou, George; Tsagarakis, Konstantinos; Koutsidi, Martha; Tzanatos, Evangelos; 2020. Using traits to build and explain an ecosystem model: Ecopath with Ecosim modelling of the North Aegean Sea (Eastern Mediterranean). Estuarine, Coastal and Shelf Science, 236, 106614. 10.1016/j.ecss.2020.106614
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2020Model application 1
Le Quesne, Will J.F.; Arreguín-Sánchez, Francisco; Heymans, Sheila J.J.; 2007. INCOFISH ecosystem models: Transiting from Ecopath to Ecospace.. , , . 10.14288/1.0074767
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2007Model application 11
Su, Meng; 2016. Preliminary analysis of the Jimo coastal ecosystem with the ecopath model. Journal of Ocean University of China, 15, 1059–1066. 10.1007/s11802-016-3078-6
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2016Model application 3
Pascoe, Sean; Okey, Tomas A.; Griffiths, Shane; 2008. Economic and ecosystem impacts of illegal, unregulated and unreported (IUU) fishing in Northern Australia*. Australian Journal of Agricultural and Resource Economics, 52, 433–452. 10.1111/j.1467-8489.2008.00420.x
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2008Model application 9
Whitehouse, George A.; Aydin, Kerim Y.; 2020. Assessing the sensitivity of three Alaska marine food webs to perturbations: an example of Ecosim simulations using Rpath. Ecological Modelling, 429, 109074. 10.1016/j.ecolmodel.2020.109074
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2020Model application 3
Wang, Ying; Pan, Haoran; Li, Shiyu; Failler, Pierre; 2015. An Integrated Socio-Economic and Ecological Framework for Evaluating the Societal Costs and Benefits of Fishing Activities in the Pearl River Delta. Open Journal of Marine Science, 5, 477–497. 10.4236/ojms.2015.54038
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2015Model application 0
Wang, Ying; Hu, Jianfeng; Pan, Haoran; Failler, Pierre; 2020. Ecosystem-based fisheries management in the Pearl River Delta: Applying a computable general equilibrium model. Marine Policy, 112, 103784. 10.1016/j.marpol.2019.103784
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2020Model application 3
Ortiz, Marco; 2018. Robustness of macroscopic-systemic network indices after disturbances on diet-community matrices. Ecological Indicators, 95, 509–517. 10.1016/j.ecolind.2018.07.043
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2018Model application 7
Zhou, Bo; Dong, Shuanglin; Wang, Fang; 2015. Trophic structure and energy fluxes in a grass carp (Ctenopharyngodon idellus) cultured pond ecosystem. Aquaculture International, 23, 1313–1324. 10.1007/s10499-015-9886-7
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2015Model application 6
Han, Rui; Chen, Qiuwen; Wang, Li; Tang, Xinwu; 2016. Preliminary investigation on the changes in trophic structure and energy flow in the Yangtze estuary and adjacent coastal ecosystem due to the Three Gorges Reservoir. Ecological Informatics, 36, 152–161. 10.1016/j.ecoinf.2016.03.002
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2016Model application 5
Webber, Mona; Persad, Gale; Harris, Nicole; Wilmot, Inilek; Webber, Dale; 2015. An ecological assessment of Foul and Folly Bays, Morant wetlands area, Jamaica using Ecopath with Ecosim. Ocean & Coastal Management, 105, 127–137. 10.1016/j.ocecoaman.2015.01.006
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2015Model application 3
Lee, Sung Il; Aydin, Kerim Y.; Spencer, Paul D.; Wilderbuer, Thomas K.; Zhang, Chang Ik; 2010. The role of flatfishes in the organization and structure of the eastern Bering Sea ecosystem. Fisheries Science, 76, 411–434. 10.1007/s12562-009-0201-2
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2010Model application 9
Persad, Gale; Webber, Mona; 2009. The Use of Ecopath Software to Model Trophic Interactions within the Zooplankton Community of Discovery Bay, Jamaica. The Open Marine Biology Journal, 3, 95–104. 10.2174/1874450800903010095
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2009Model application 10
Beecham, Jonathan; Bruggeman, Jorn; Aldridge, John; Mackinson, Steven; 2016. <i>Couplerlib</i>: a metadata-driven library for the integration of multiple models of higher and lower trophic level marine systems with inexact functional group matching. Geoscientific Model Development, 9, 947–964. 10.5194/gmd-9-947-2016
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2016Model application 3
Giacaman-Smith, José; Neira, Sergio; Arancibia, Hugo; 2016. Community structure and trophic interactions in a coastal management and exploitation area for benthic resources in central Chile. Ocean & Coastal Management, 119, 155–163. 10.1016/j.ocecoaman.2015.10.003
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2016Model application 8
Wondie, Ayalew; Fetahi, Tadesse; 2012. Trophic Interactions in Lake Tana, a Large Turbid Highland Lake in Ethiopia. In: (eds.)Developments in Environmental Modelling.. 217–235.
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2012Model application 4
Armada, Nygiel B.; Bacalso, Regina Therese M.; Rosales, Rina Maria P.; Lazarte, Alfredo T.; 2018. Right-sizing as a strategy for allocating fishing effort in a defined marine ecosystem: A Philippines case study. Ocean & Coastal Management, 165, 167–184. 10.1016/j.ocecoaman.2018.08.018
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2018Model application 3
Traore, A.; Ouattara, A.; Doumbia, L.; Tah, L.; Moreau, J.; Gourène, G.; 2008. Trophic structure and interactions in Lake Ayamé (Côte d’Ivoire). Knowledge and Management of Aquatic Ecosystems, , 02. 10.1051/kmae:2008002
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2008Model application 13
Rahman, Muhammed Forruq; Qun, Lin; Xiujuan, Shan; Chen, Yunlong; Ding, Xiaosong; Liu, Qun; 2019. Temporal Changes of Structure and Functioning of the Bohai Sea Ecosystem: Insights from Ecopath Models. Thalassas: An International Journal of Marine Sciences, 35, 625–641. 10.1007/s41208-019-00139-1
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2019Model application 5
Granzotto, Angela; Pranovi, Fabio; Libralato, Simone; Torricelli, Patrizia; Mainardi, Danilo; 2004. Comparison between Artisanal Fishery and Manila Clam Harvesting in the Venice Lagoon by Using Ecosystem Indicators: An Ecological Economics Perspective. SSRN Electronic Journal, , . 10.2139/ssrn.588721
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2004Model application 88
Pérez España, Horacio; 2003. Ecological importance of snappers in the stability of modeled coastal ecosystems. Ecological Modelling, 168, 13–24. 10.1016/S0304-3800(03)00201-1
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2003Model application 9
Blanco, Juan A.; Cisneros-Montemayor, Andrés M.; 2013. Modelos ecológicos para analizar el papel económico de los peces de forraje. In: (eds.)Aplicaciones de modelos ecológicos a la gestión de recursos naturales.. 67–76.
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2013Model application 5
Janjua, Muhammad Yamin; Tallman, Ross; Howland, Kimberly; 2014. Elucidation of ecosystem attributes of two Mackenzie great lakes with trophic network analysis. Aquatic Ecosystem Health & Management, 17, 151–160. 10.1080/14634988.2014.910428
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2014Model application 2
Adedeji, Oludare Hakeem; Elegbede, Isa Olalekan; 2018. Mapping and Modeling Ecosystem Services in Petroleum-Producing Areas in Nigeria. In: (eds.)The Political Ecology of Oil and Gas Activities in the Nigerian Aquatic Ecosystem.. 159–175.
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2018Model application 1
Niiranen, S.; Stipa, T.; Hirvonen, A.; Paakkonen, J.-P.; Norkko, A.; 2008. Modelled bioaccumulation of chemical warfare agents within the Baltic Sea food web. . Volume .
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2008Model application 6
Gonenc, I. Ethem; Koutitonsky, Vladimir G.; Rashleigh, Brenda; Ambrose, Robert B.; Wolflin, John P.; Razinkovas, Arturas; 2007. TROPHIC NETWORK MODELS AND PREDICTION OF TOXIC SUBSTANCES ACCUMULATION IN FOOD WEBS. In: (eds.)Assessment of the Fate and Effects of Toxic Agents on Water Resources.. 279–289.
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2007Model application 2
Jopp, Fred; Reuter, Hauke; Breckling, Broder; Wolff, Matthias; Taylor, Marc; 2011. Steady State Models of Ecological Systems: EcoPath Approach to Mass-Balanced System Descriptions. In: (eds.)Modelling Complex Ecological Dynamics.. 55–66.
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2011Model application 0
Salcido-Guevara, Luís Antonio; Monte-Luna, Pablo del; Arreguín-Sánchez, Francisco; Cruz-Escalona, Víctor Hugo; 2012. Potential Ecosystem Level Effects of a Shrimp Trawling Fishery in La Paz Bay, Mexico. Open Journal of Marine Science, 2, 85–89. 10.4236/ojms.2012.23011
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2012Model application 1
Indrayati, Elis; 2005. Studi Ekosistem Teluk Ekas Melalui Pendekatan Keseimbangan Masa. ILMU KELAUTAN: Indonesian Journal of Marine Sciences, 10, 85–89. 10.14710/ik.ijms.10.2.85-89
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2005Model application 0
Tan, Barron Cedric; Anticamara, Jonathan; Villanueva, Maria Ching; 2018. Modeling of degraded reefs in Leyte Gulf, Philippines in the face of climate change and human-induced disturbances. Climate, Disaster and Development Journal, , 1–12. 10.18783/cddj.v003.i01.a01
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2018Model application 2
Zhao, Junjie; Bai, Jing; Zhang, Lu; Wang, Ning; Shou, Youping; 2018. Study on the ecosystem construction of using ecopath model in inland waterway. IOP Conference Series: Earth and Environmental Science, 133, 012026. 10.1088/1755-1315/133/1/012026
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2018Model application 0
Barros, Mónica E.; Neira, Sergio; Arancibia, Hugo; 2014. Trophic interactions in northern Chile upwelling ecosystem, year 1997. Latin American Journal of Aquatic Research, 42, 1109–1125. 10.3856/vol42-issue5-fulltext-15
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2014Model application 2
Bai, Yashu; Cai, Rongshuo; 2015. The Principles of Ecopath with Ecosim and its Application in Marine Ecosystem. . Volume .
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2015Model application 0
Niiranen, Susa; Yletyinen, Johanna; Tomczak, Maciej T.; Blenckner, Thorsten; Hjerne, Olle; MacKenzie, Brian R.; Müller-Karulis, Bärbel; Neumann, Thomas; Meier, H. E. Markus; 2013. Combined effects of global climate change and regional ecosystem drivers on an exploited marine food web. Global Change Biology, , n/a–n/a. 10.1111/gcb.12309
(View/edit entry)
2013Model application 108
Subramaniam, Roshni C.; Melbourne-Thomas, Jessica; Corney, Stuart P.; Alexander, Karen; Péron, Clara; Ziegler, Philippe; Swadling, Kerrie M.; 2020. Time-Dynamic Food Web Modeling to Explore Environmental Drivers of Ecosystem Change on the Kerguelen Plateau. Frontiers in Marine Science, 7, 641. 10.3389/fmars.2020.00641
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2020Model application 3
Halouani, Ghassen; Villanueva, Ching-Maria; Raoux, Aurore; Dauvin, Jean Claude; Ben Rais Lasram, Frida; Foucher, Eric; Le Loc'h, François; Safi, Georges; Araignous, Emma; Robin, Jean Paul; Niquil, Nathalie; 2020. A spatial food web model to investigate potential spillover effects of a fishery closure in an offshore wind farm. Journal of Marine Systems, 212, 103434. 10.1016/j.jmarsys.2020.103434
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2020Model application 4
Püts, Miriam; Taylor, Marc; Núñez-Riboni, Ismael; Steenbeek, Jeroen; Stäbler, Moritz; Möllmann, Christian; Kempf, Alexander; 2020. Insights on integrating habitat preferences in process-oriented ecological models – a case study of the southern North Sea. Ecological Modelling, 431, 109189. 10.1016/j.ecolmodel.2020.109189
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2020Model application 3
Hernvann, Pierre-Yves; Gascuel, Didier; Grüss, Arnaud; Druon, Jean-Noël; Kopp, Dorothée; Perez, Ilan; Piroddi, Chiara; Robert, Marianne; 2020. The Celtic Sea Through Time and Space: Ecosystem Modeling to Unravel Fishing and Climate Change Impacts on Food-Web Structure and Dynamics. Frontiers in Marine Science, 7, 578717. 10.3389/fmars.2020.578717
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2020Model application 4
Vilas, Daniel; Coll, Marta; Corrales, Xavier; Steenbeek, Jeroen; Piroddi, Chiara; Macias, Diego; Ligas, Alessandro; Sartor, Paolo; Claudet, Joachim; 2021. Current and potential contributions of the Gulf of Lion Fisheries Restricted Area to fisheries sustainability in the NW Mediterranean Sea. Marine Policy, 123, 104296. 10.1016/j.marpol.2020.104296
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2021Model application 2
Sadchatheeswaran, Saachi; Branch, George M; Shannon, Lynne J; Moloney, Coleen L; Coll, Marta; Robinson, Tamara B; 2020. Modelling changes in trophic and structural impacts of alien ecosystem engineers on a rocky-shore island. Ecological Modelling, 433, 109227. 10.1016/j.ecolmodel.2020.109227
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2020Model application 3
Chagaris, David D.; Patterson, William F.; Allen, Micheal S.; 2020. Relative Effects of Multiple Stressors on Reef Food Webs in the Northern Gulf of Mexico Revealed via Ecosystem Modeling. Frontiers in Marine Science, 7, 513. 10.3389/fmars.2020.00513
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2020Model application 6
Chagaris, David; Drew, Katie; Schueller, Amy; Cieri, Matt; Brito, Joana; Buchheister, Andre; 2020. Ecological Reference Points for Atlantic Menhaden Established Using an Ecosystem Model of Intermediate Complexity. Frontiers in Marine Science, 7, 606417. 10.3389/fmars.2020.606417
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2020Model application 7
Smith, Mason; Chagaris, David; Paperno, Richard; Markwith, Scott; 2020. Ecosystem structure and resilience of the Florida Bay Estuary: an original ecosystem model with implications for everglades restoration. Marine and Freshwater Research, , . 10.1071/MF20125
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2020Model application 1
Steenbeek, Jeroen; Romagnoni, Giovanni; Bentley, Jacob W.; Heymans, Johanna J.; Serpetti, Natalia; Gonçalves, Magali; Santos, Carlos; Warmelink, Harald; Mayer, Igor; Keijser, Xander; Fairgrieve, Rhona; Abspoel, Lodewijk; 2020. Combining ecosystem modeling with serious gaming in support of transboundary maritime spatial planning. Ecology and Society, 25, art21. 10.5751/ES-11580-250221
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2020Model application 10
Grossowicz, Michal; Ofir, Eyal; Shabtay, Ateret; Wood, Julie; Biton, Eli; Belkin, Natalia; Frid, Ori; Sisma-Ventura, Guy; Kress, Nurit; Berman-Frank, Ilana; Gal, Gideon; 2020. Modeling the effects of brine outflow from desalination plants on coastal food-webs of the Levantine basin (eastern Mediterranean Sea). Desalination, 496, 114757. 10.1016/j.desal.2020.114757
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2020Model application 4
Rohal, Melissa; Ainsworth, Cameron; Lupher, Brach; Montagna, Paul A.; Paris, Claire B.; Perlin, Natalie; Suprenand, Paul Mark; Yoskowitz, David; 2020. The effect of the Deepwater Horizon oil spill on two ecosystem services in the Northern Gulf of Mexico. Environmental Modelling & Software, 133, 104793. 10.1016/j.envsoft.2020.104793
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2020Model application 4
Livne, Leigh; Grossowicz, Michal; Tchernov, Dan; Ayalon, Ofira; 2020. Predicting Impacts of Offshore Monoculture Farm Expansion in Ultra-Oligotrophic Waters of the Levantine Basin. Frontiers in Marine Science, 7, 556. 10.3389/fmars.2020.00556
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2020Model application 0
Mendoza, José Carlos; Hernández, José Carlos; 2019. Modelo trófico del ecosistema rocoso litoral de la isla de El Hierro, islas Canarias. Scientia Insularum. Revista de Ciencias Naturales en islas, 2, 121–150. 10.25145/j.SI.2019.02.06
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2019Model application 0
Khatun, Mst Halima; Barman, Partho Protim; Yi, Jundong; Lupa, Saymuna Tarin; Zahangir, Md Mahiuddin; Liu, Qun; 2020. A preliminary snapshot of the trophic model and ecosystem attributes of Kaptai reservoir ecosystem, Bangladesh. Journal of Oceanology and Limnology, , . 10.1007/s00343-020-9284-5
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2020Model application 1
Barros, Monica E.; Neira, Sergio; Arancibia, Hugo; 2014. Trophic interactions in northern Chile upwelling ecosystem, year 1997. Latin American Journal of Aquatic Research, 42, 1109–1125. 10.3856/vol42-issue5-fulltext-15
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2014Model application 2
Lira, Alex Souza; Lucena-Frédou, Flávia; Le Loc'h, François; 2021. How the fishing effort control and environmental changes affect the sustainability of a tropical shrimp small scale fishery. Fisheries Research, 235, 105824. 10.1016/j.fishres.2020.105824
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2021Model application 2
Morales-Zárate, M.V.; López-Ramírez, J.A.; Salinas-Zavala, C.A.; 2021. Loggerhead marine turtle (Caretta caretta) ecological facts from a trophic relationship model in a hot spot fishery area: Gulf of Ulloa, Mexico. Ecological Modelling, 439, 109327. 10.1016/j.ecolmodel.2020.109327
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2021Model application 0
Sinha, Swagata; Banerjee, Arnab; Rakshit, Nabyendu; Raman, Akkur V.; Bhadury, Punyasloke; Ray, Santanu; 2021. Importance of benthic-pelagic coupling in food-web interactions of Kakinada Bay, India. Ecological Informatics, 61, 101208. 10.1016/j.ecoinf.2020.101208
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2021Model application 0
Drew, Katie; Cieri, Matthew; Schueller, Amy M.; Buchheister, Andre; Chagaris, David; Nesslage, Geneviève; McNamee, Jason E.; Uphoff, James H.; 2021. Balancing Model Complexity, Data Requirements, and Management Objectives in Developing Ecological Reference Points for Atlantic Menhaden. Frontiers in Marine Science, 8, 608059. 10.3389/fmars.2021.608059
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2021Model application 5
Angelini, Ronaldo; Fabrè, Nídia Noemi; Silva-JR, Urbano Lopes da; 2006. Trophic analysis and fishing simulation of the biggest Amazonian catfish. , , . 10.5897/AJAR.9000747
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2006Model application 24
Lamb, Philip D; Hunter, Ewan; Pinnegar, John K; Doyle, Thomas K; Creer, Simon; Taylor, Martin I; 2019. Inclusion of jellyfish in 30+ years of Ecopath with Ecosim models. ICES Journal of Marine Science, 76, 1941–1950. 10.1093/icesjms/fsz165
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2019Model application 9
Ricci, P.; Sion, L.; Capezzuto, F.; Cipriano, G.; D'Onghia, G.; Libralato, S.; Maiorano, P.; Tursi, A.; Carlucci, R.; 2021. Dataset and species aggregation method applied to food-web models in the Northern Ionian Sea (Central Mediterranean Sea). Data in Brief, 36, 106964. 10.1016/j.dib.2021.106964
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2021

Model application

0
Paradell, O.G.; Methion, S.; Rogan, E., Lopez, B.D.; 2021. Modelling ecosystem dynamics to assess the effect of coastal fisheries on cetacean species. Journal of Environmental Management, 285, 112175. 10.1016/j.jenvman.2021.112175
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2021

Model application

1
Hernández-Padilla, Juan Carlos; Zetina-Rejón, Manuel J.; Arreguín-Sánchez, F.; del Monte-Luna, Pablo; Nieto-Navarro, José T.; Salcido-Guevara, Luis A.; 2021. Structure and function of the southeastern Gulf of California ecosystem during low and high sea surface temperature variability. Regional Studies in Marine Science, 43, 101686. 10.1016/j.rsma.2021.101686
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2021

Model application

1
Sánchez-Jiménez, Astrid; MacMillan, Douglas; Wolff, Matthias; Schlüter, Achim; Fujitani, Marie; 2021. The Importance of Values in Predicting and Encouraging Environmental Behavior: Reflections From a Costa Rican Small-Scale Fishery. Frontiers in Marine Science, 8, 543075. 10.3389/fmars.2021.543075
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2021Model application 0
Tillman, Dorothy H.; Cerco, Carl F.; 2009. Recreating the 1950's Chesapeake Bay: Use of a Network Model to Guide the Application of a Eutrophication Model:. .
(View/edit entry)
2009Model application 3
Cerco, Carl F.; Tillman, Dorothy H.; Gerald, Terry K.; 2009. User's Guide to Linking the CE-QUAL-ICM and Ecopath Models:. .
(View/edit entry)
2009Model application 1
Lewis, Kristy A.; Rose, Kenneth A.; de Mutsert, Kim; Sable, Shaye; Ainsworth, Cameron; Brady, Damian C.; Townsend, Howard; 2021. Using Multiple Ecological Models to Inform Environmental Decision-Making. Frontiers in Marine Science, 8, 625790. 10.3389/fmars.2021.625790
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2021Model application 5
Couce Montero, Lorena; Christensen, Villy; Castro Hernández, José Juan; 2021. Simulating trophic impacts of fishing scenarios on two oceanic islands using Ecopath with Ecosim. Marine Environmental Research, 169, 105341. 10.1016/j.marenvres.2021.105341
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2021Model application 1
Horn, Sabine; Coll, Marta; Asmus, Harald; Dolch, Tobias; 2021. Food web models reveal potential ecosystem effects of seagrass recovery in the northern Wadden Sea. Restoration Ecology, 29, . 10.1111/rec.13328
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2021Model application 3
Wardaszko, Marcin; Meijer, Sebastiaan; Lukosch, Heide; Kanegae, Hidehiko; Kriz, Willy Christian; Grzybowska-Brzezińska, Mariola; Goncalves, Magali; Steenbeek, Jeroen; Tomczak, Maciej; Romagnoni, Giovanni; Puntilla, Rikka; Karvinen, Ville; Santos, Carlos; Keijser, Xander; Abspoel, Lodewijk; Warmelink, Harald; Mayer, Igor; 2021. Food-Web Modeling in the Maritime Spatial Planning Challenge Simulation Platform: Results from the Baltic Sea Region. In: (eds.)Simulation Gaming Through Times and Disciplines.. 290–305.
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2021Model application 1
Steyn, C.; Shannon, L.J.; Blamey, L.K.; 2021. Changes in food-web structure and energy flow in kelp forest ecosystems on the south-west coast of South Africa following the invasion of Jasus lalandii. Food Webs, 28, e00200. 10.1016/j.fooweb.2021.e00200
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2021Model application 0
Szalaj, Dorota; Silva, Alexandra; Ré, Pedro; Cabral, Henrique; 2021. Detecting Regime Shifts in the Portuguese Continental Shelf Ecosystem Within the Last Three Decades. Frontiers in Marine Science, 8, 629130. 10.3389/fmars.2021.629130
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2021Model application 0
Giacomuzzo, Emanuele; Jordán, Ferenc; 2021. Food web aggregation: effects on key positions. .
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2021Model application 0
Zeng, Yong; Zhao, Yanwei; Qi, Zefeng; 2021. Evaluating the ecological state of Chinese Lake Baiyangdian (BYD) based on Ecological Network Analysis. Ecological Indicators, 127, 107788. 10.1016/j.ecolind.2021.107788
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2021Model application 3
Khan, Mohamed Feroz; Panikkar, Preetha; Salim, Sibina Mol; Leela, Ramya Vijayakumar; Sarkar, Uttam Kumar; Das, Basanta Kumar; Eregowda, Vijayakumar Muttenahalli; 2021. Modeling impacts of invasive sharp tooth African catfish Clarias gariepinus (Burchell 1822) and Mozambique tilapia Oreochromis mossambicus (Peters, 1852) on the ecosystem of a tropical reservoir ecosystem in India. Environmental Science and Pollution Research, , . 10.1007/s11356-021-14667-y
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2021Model application 2
Manju Lekshmi, N.; Sreekanth, G. B.; Singh, Narendra Pratap; Vennila, A.; Ratheesh Kumar, R.; Pandey, P K; 2020. Ecopath modelling approach for the impact assessment of a small-scale coastal aquaculture system in Goa, India. Indian Journal of Fisheries, 67, . 10.21077/ijf.2020.67.3.88300-05
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2020Model application 1
Ortiz, Marco; Jordán, Ferenc; Neira, Sergio; Arancibia, Hugo; 2021. Using Ecosystem Models to Evaluate Stock Recovery in Two Hake Species from Chile. In: (eds.)Marine Coastal Ecosystems Modelling and Conservation.. 77–94.
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2021Model application 0
Ortiz, Marco; Jordán, Ferenc; González, Jorge E.; 2021. Exploring Harvest Strategies in a Benthic Habitat in the Humboldt Current System (Chile): A Study Case. In: (eds.)Marine Coastal Ecosystems Modelling and Conservation.. 127–141.
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2021Model application 0
Wang, Shuran Cindy; Liu, Xueqin; Liu, Yong; Wang, Hongzhu; 2021. Disentangling effects of multiple stressors on matter flow in a lake food web. Ecology and Evolution, 11, 9652–9664. 10.1002/ece3.7789
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2021Model application 0
Susini, Irene; Todd, Victoria L.G.; 2021. Predictive capacity of Ecopath with Ecosim: Model performance and ecological indicators’ response to imprecision. Environmental Modelling & Software, 143, 105098. 10.1016/j.envsoft.2021.105098
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2021Model application 1
Sadchatheeswaran, Saachi; Branch, George M.; Shannon, Lynne J.; Coll, Marta; Steenbeek, Jeroen; 2021. A novel approach to explicitly model the spatiotemporal impacts of structural complexity created by alien ecosystem engineers in a marine benthic environment. Ecological Modelling, 459, 109731. 10.1016/j.ecolmodel.2021.109731
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2021Model application 0
García-Rodríguez, Encarnación; Coll, Marta; Vivas, Miguel; Bellido, José María; Esteban, Antonio; Torres, María Ángeles; 2021. A food-web comparative modeling approach highlights ecosystem singularities of the Gulf of Alicante (Western Mediterranean Sea). Journal of Sea Research, 174, 102073. 10.1016/j.seares.2021.102073
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2021Model application 1
Sinnickson, Dylan; Chagaris, David; Allen, Micheal; 2021. Exploring Impacts of River Discharge on Forage Fish and Predators Using Ecopath With Ecosim. Frontiers in Marine Science, 8, 689950. 10.3389/fmars.2021.689950
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2021Model application 0
Luczkovich, Joseph J.; Johnson, Jeffrey C.; Deehr, Rebecca A.; Hart, Kevin J.; Clough, Lisa; Griffith, David C.; 2021. Linking Fishing Behavior and Ecosystem Dynamics Using Social and Ecological Network Models. Frontiers in Ecology and Evolution, 9, 662412. 10.3389/fevo.2021.662412
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2021Model application 0
Lin, Hsing-Juh; Shao, Kwang-Tsao; Hwang, Jiang-Shiou; Lo, Wen-Tseng; Cheng, I-Jiunn; Lee, Lih-Huwa; 2004. A Trophic Model for Kuosheng Bay in Northern Taiwan. Journal of Marine Science and Technology, 12, . 10.51400/2709-6998.2264
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2004Model application 44
Tajzadehnamin, Mona; Valinassab, Tooraj; Ramezani- Fard, Ehsan; Ehteshami, Fariborz; 2020. Trophic dynamics analysis and ecosystem structure for some fish species of northern Oman Sea. Iranian Journal of Fisheries Sciences, 19, . 10.22092/ijfs.2020.122699
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2020Model application 0
He, Cong-Ying; Mao, Shuo-Qian; Yan, Xiao-Jun; Meng, Kuan-Hong; Hu, Dai-Fu; 2021. Comparison of the 2010 and 2020 ecosystem structures in Xihu Harbor based on the Ecopath model. Ocean & Coastal Management, 213, 105873. 10.1016/j.ocecoaman.2021.105873
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2021Model application 0
Rupp, Aurora; Bornatowski, Hugo; 2021. Food web model to assess the fishing impacts and ecological role of elasmobranchs in a coastal ecosystem of Southern Brazil. Environmental Biology of Fishes, 104, 905–921. 10.1007/s10641-021-01120-9
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2021Model application 0
Giacomuzzo, Emanuele; Jordán, Ferenc; 2021. Food web aggregation: effects on key positions. Oikos, 130, 2170–2181. 10.1111/oik.08541
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2021

Model application

0
Surma, Szymon; Pakhomov, Evgeny A.; Pitcher, Tony J.; 2021. Pacific herring (Clupea pallasii) as a key forage fish in the southeastern Gulf of Alaska. Deep Sea Research Part II: Topical Studies in Oceanography, , 105001. 10.1016/j.dsr2.2021.105001
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2021

Model application

0
Endrédi, Anett; Patonai, Katalin; Podani, János; Libralato, Simone; Jordán, Ferenc; 2021. Who Is Where in Marine Food Webs? A Trait-Based Analysis of Network Positions. Frontiers in Marine Science, 8, 636042. 10.3389/fmars.2021.636042
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2021

Model application

1
Dimarchopoulou, Donna; Tsagarakis, Konstantinos; Sylaios, Georgios; Tsikliras, Athanassios C.; 2022. Ecosystem trophic structure and fishing effort simulations of a major fishing ground in the northeastern Mediterranean Sea (Thermaikos Gulf). Estuarine, Coastal and Shelf Science, 264, 107667. 10.1016/j.ecss.2021.107667
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2022

Model application

0
Pedersen, Torstein; Mikkelsen, Nina; Lindstrøm, Ulf; Renaud, Paul E.; Nascimento, Marcela C.; Blanchet, Marie-Anne; Ellingsen, Ingrid H.; Jørgensen, Lis L.; Blanchet, Hugues; 2021. Overexploitation, Recovery, and Warming of the Barents Sea Ecosystem During 1950–2013. Frontiers in Marine Science, 8, 732637. 10.3389/fmars.2021.732637
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2021

Model application

0
Dong, Shipeng; Wang, Fang; Zhang, Dongxu; Yu, Liye; Pu, Weijia; Xu, Xian; Xie, Yicheng; 2021. Assessment of the Carrying Capacity of Integrated Pond Aquaculture of Portunus trituberculatus at the Ecosystem Level. Frontiers in Marine Science, 8, 747891. 10.3389/fmars.2021.747891
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2021

Model application

0
Steenbeek, Jeroen; 2018. EwE​ ​model​ ​guidelines​ ​for​ ​MSP​ ​game play. , , 222738 Bytes. 10.6084/M9.FIGSHARE.5897185.V1
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2018

Model application

0
Petriki, Olga; Moutopoulos, Dimitrios K.; Tsagarakis, Konstantinos; Tsionki, Ioanna; Papantoniou, Georgia; Mantzouni, Irene; Barbieri, Roberta; Stoumboudi, Maria Th.; 2021. Assessing the Fisheries and Ecosystem Structure of the Largest Greek Lake (Lake Trichonis). Water, 13, 3329. 10.3390/w13233329
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2021

Model application

0
Yin, Chengjie; Gong, Li; Chen, Yushun; Ni, Leyi; Pitcher, Tony J.; Kang, Bin; Guo, Longgen; 2022. Modeling ecosystem impacts of the invasive Japanese smelt Hypomesus nipponensis in Lake Erhai, southwestern China. Ecological Informatics, 67, 101488. 10.1016/j.ecoinf.2021.101488
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2022

Model application

0

Model application

3
Zhang, X.; Zhang, L.; Tong, F.; Liu, H.; 2013. Predicting the ecological carrying capacity of the Lidao artificial reef zone of Shandong Province for the sea cucumber, Apostichopus japonicus, (Selenck) and the abalone, Haliotis discus hannai, using a linear food web model. Journal of Fishery Sciences of China, 20, 327-337. 10.3724/SP.J.1118.2013.00327
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2013

Model application

3
Kumar, Rajeev; Surma, Szymon; Pitcher, Tony J.; Varkey, Divya; Lam, Mimi E.; Ainsworth, Cameron H.; Pakhomov, Evgeny; 2017. An Ecosystem Model of the Ocean Around Haida Gwaii, Northern British Columbia : Ecopath, Ecosim and Ecospace. , , . 10.14288/1.0354480
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2017

Model application

5
Sreekanth, G. B.; Chakraborty, S. K.; Jaiswar, A. K.; Zacharia, P. U.; Mohamed, K. S.; 2021. Modeling the impacts of fishing regulations in a tropical Indian estuary using Ecopath with Ecosim approach. Environment, Development and Sustainability, 23, 17745–17763. 10.1007/s10668-021-01410-3
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2021

Model application

0
Couce, Lorena; Christensen, Villy; Bilbao-Sieyro, Alberto; Perez, Yeray; Castro, Jose J.; 2019. Simulating trophic impacts of recreational fishing scenarios on two oceanic islands using Ecopath with Ecosim. Frontiers in Marine Science, 6, . 10.3389/conf.fmars.2019.08.00054
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2019

Model application

1
Drgas, Aleksander; Całkiewicz, Joanna; 2019. Assessing the role of benthic filter feeders in in the food web of the Gulf of Gdansk (Sothern Baltic) – an Ecopath with Ecosim exercise. Frontiers in Marine Science, 6, . 10.3389/conf.fmars.2019.08.00040
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2019

Model application

0
Calkiewicz, Joanna; Drgas, Aleksander; Smolinski, Szymon; Tomczak, Maciej; Margonski, Piotr; Muller-Karulis, Bärbel; Szymanek, Lena; 2019. Ecopath and Ecosim as tools in foodweb understanding - the Gulf of Gdansk example.. Frontiers in Marine Science, 6, . 10.3389/conf.fmars.2019.08.00014
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2019

Model application

0
de Araújo, Júlio Neves; 2017. SIMULAÇÃO DA EXPLORAÇÃO DE RECURSOS NATURAIS DO ECOSSISTEMA DA BACIA DE CAMPOS (RJ) UTILIZANDO UM MODELO ECOPATH WITH ECOSIM Araújo, J.N. 2017. Simulação da exploração de recursos naturais do ecossistema da Bacia de Campos (RJ) utilizando um modelo Ecopath with Ecosim. In: Angelini, R., Araújo, J.N., Falcão, A.P.C., editores. Modelagem Ecossistêmica para integração e manejo na Bacia de Campos (Atlântico Sudoeste). Rio de Janeiro: Elsevier. Habitats, v. 8. p. 189-203.. In: (eds.)Modelagem Ecossistêmica para Integração e Manejo Na Bacia de Campos (Atlântico Sudoeste), Vol 8.. 189–203.
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2017

Model application

0
Ainsworth, Cameron and Alisha Gray; 2015. Ecopath with Ecosim model of the West Florida Shelf representing 1980 for harmful algal bloom simulations. , , .
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2015

Model application

0
Ainsworth, C.H.; Walters, C.J.; 2015. Ten common mistakes made in Ecopath with Ecosim modelling. Ecological Modelling, 308, 14–17. 10.1016/j.ecolmodel.2015.03.019
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2015

Model application

21
Akoglu, E.; Libralato, S.; Salihoglu, B.; Oguz, T.; Solidoro, C.; 2015. EwE-F 1.0: an implementation of Ecopath with Ecosim in Fortran 95/2003 for coupling. .
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2015

Model application

9
Blanco, Juan A.; Bayle-Sempere, Just T.; Arreguín-Sanchez, Francisco; Sánchez-Jerez, Pablo; Fernández-Jover, Damián; Arechavala-López, Pablo; Izquierdo Gómez, David; 2013. Análisis y evaluación ecosistémicos de la piscicultura marina con "Ecopath with Ecosim" (EwE). In: (eds.)Aplicaciones de modelos ecológicos a la gestión de recursos naturales.. 39–65.
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2013

Model application

1
Parrish, Frank A.; Howell, Evan A.; Antonelis, George A.; Iverson, Sara J.; Littnan, Charles L.; Parrish, James D.; Polovina, Jeffrey J.; 2012. Estimating the carrying capacity of French Frigate Shoals for the endangered Hawaiian monk seal using Ecopath with Ecosim. Marine Mammal Science, 28, 522–541. 10.1111/j.1748-7692.2011.00502.x
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2012

Model application

14

Model application

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Zhang, Tian Wen; Su, Yue Peng; Ma, Shen; 2011. A Preliminary Study of Ecopath with Ecosim to the Shrimp Pond Ecosystem. Applied Mechanics and Materials, 88, 423–426. 10.4028/www.scientific.net/AMM.88-89.423
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2011

Model application

1
Espinosa-Romero, Maria J.; Gregr, Edward J.; Walters, Carl; Christensen, Villy; Chan, Kai M.A.; 2011. Erratum to “Representing mediating effects and species reintroductions in Ecopath with Ecosim” [Ecol. Model. 222 (2011) 1569–1579]. Ecological Modelling, 222, 2168. 10.1016/j.ecolmodel.2011.04.001
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2011

Model application

0
Jørgensen, S. E.; Chon, T. -S.; Recknagel, F.; Christensen, V.; 2009. Ecopath with Ecosim: linking fisheries and ecology. In: (eds.)WIT Transactions on State of the Art in Science and Engineering.. 55–70.
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2009

Model application

20
D. (Daniel), Pauly; Weingartner, Gunna; 2017. Use of Ecopath with Ecosim to Evaluate Strategies for Sustainable Exploitation of Multi-Species Resources. , , . 10.14288/1.0348095
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2017

Model application

26

Model application

1
A. Kearney, Kelly; 2017. ecopath_matlab: A Matlab-based implementation of the Ecopath food web algorithm. The Journal of Open Source Software, 2, 64. 10.21105/joss.00064
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2017

Model application

10
Woodruff, Patricia; van Poorten, Brett; Walters, Carl; Christensen, Villy; 2021. Potential effects of invasive Dreissenid mussels on a pelagic freshwater ecosystem: using an ecosystem model to simulate mussel invasion in a sockeye lake. Aquatic Invasions, 16, 129–146. 10.3391/ai.2021.16.1.09
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2021

Model application

2

Model application

1
Hoover, C.; Giraldo, C.; Ehrman, A.; Suchy, K.D.; MacPhee, S.A.; Brewster, J.; Reist, J.D.; Power, M.; Swanson, H.; Loseto, L.; 2021. The Canadian Beaufort Shelf trophic structure: evaluating an ecosystem modelling approach by comparison with observed stable isotopic structure. Arctic Science, , 1–21. 10.1139/as-2020-0035
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2021

Model application

1
Dias, Beatriz S.; Frisk, Michael G.; Jordaan, Adrian; 2021. Contrasting fishing effort reduction and habitat connectivity as management strategies to promote alewife ( Alosa pseudoharengus ) recovery using an ecosystem model. Limnology and Oceanography, , lno.11871. 10.1002/lno.11871
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2021

Model application

0
Kaplan, Ic; Francis, Tb; Punt, Ae; Koehn, Le; Curchitser, E; Hurtado-Ferro, F; Johnson, Kf; Lluch-Cota, Se; Sydeman, Wj; Essington, Te; Taylor, N; Holsman, K; MacCall, Ad; Levin, Ps; 2019. A multi-model approach to understanding the role of Pacific sardine in the California Current food web. Marine Ecology Progress Series, 617, 307–321. 10.3354/meps12504
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2019

Model application

24
Lam, Me; Pitcher, Tj; Surma, S; Scott, J; Kaiser, M; White, Asj; Pakhomov, Ea; Ward, Lm; 2019. Value- and ecosystem-based management approach: the Pacific herring fishery conflict. Marine Ecology Progress Series, 617, 341–364. 10.3354/meps12972
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2019

Model application

18
Weijerman, Mariska; Oyafuso, Zack S; Leong, Kirsten M; Oleson, Kirsten L L; Winston, Morgan; Travers-Trolet, Morgane; 2021. Supporting Ecosystem-based Fisheries Management in meeting multiple objectives for sustainable use of coral reef ecosystems. ICES Journal of Marine Science, 78, 2999–3011. 10.1093/icesjms/fsaa194
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2021

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0
Bentley, Jacob W; Serpetti, Natalia; Fox, Clive; Heymans, Johanna J; Reid, David G; Coll, Marta; 2019. Fishers’ knowledge improves the accuracy of food web model predictions. ICES Journal of Marine Science, 76, 897–912. 10.1093/icesjms/fsz003
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2019

Model application

10
Boschetti, Fabio; Prunera, Karine; Vanderklift, Mathew A; Thomson, Damian P; Babcock, Russell C; Doropoulos, Christopher; Cresswell, Anna; Lozano-Montes, Hector; Griffith, Gary; 2020. Information-theoretic measures of ecosystem change, sustainability, and resilience. ICES Journal of Marine Science, 77, 1532–1544. 10.1093/icesjms/fsz105
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2020

Model application

4
Clores, Michael A.; Cuesta, Michael A.; 2019. Trophic Models of Seagrass Ecosystems in Maqueda Channel, Caramoan Peninsula, Philippines. Applied Environmental Research, , 14–31. 10.35762/AER.2019.41.3.2
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2019

Model application

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Colléter, Mathieu; Guitton, Jérôme; Gascuel, Didier; 2013. An Introduction to the EcoTroph R Package: Analyzing Aquatic Ecosystem Trophic Networks. The R Journal, 5, 98. 10.32614/RJ-2013-010
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2013

Model application

31
Li, C; Wang, Q; Ye, S; Huang, G; Liu, J; Li, Z; 2018. Modeling trophic structure and energy flows in a shallow lake, Yangtze River Basin, China: a case analysis for culture-based fishery practices. Aquaculture Environment Interactions, 10, 213–226. 10.3354/aei00257
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2018

Model application

4
Kumari, Rekha; 2018. SUMMING UP WATER CHARACTERISTICS WITH SOFTWARE-ANALYSED TROPHIC INTERRELATIONS IN A POND.. International Journal of Advanced Research, 6, 952–955. 10.21474/IJAR01/8221
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2018

Model application

2
Türkoğlu, Muhammet; Önal, Umur; Ismen, Ali; Webber, Mona K.; Webber, Dale F.; Ford, Gale Persad; 2018. Plankton Ecology and Productivity in Jamaican Waters with New and Unique Applications. In: (eds.)Marine Ecology - Biotic and Abiotic Interactions.. .
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2018

Model application

1
Sharma, Sahadev; Simon, Ngomba Longonje; 2018. Cameroon Mangrove Forest Ecosystem: Ecological and Environmental Dimensions. In: (eds.)Mangrove Ecosystem Ecology and Function.. .
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2018

Model application

0
Pitcher, Tony J.; Cochrane, K. L.; 2017. The Use of Ecosystem Models to Investigate Multispecies Management Strategies for Capture Fisheries. , , . 10.14288/1.0348151
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2017

Model application

88
Watermeyer, Ke; Shannon, Lj; Griffiths, Cl; 2008. Changes in the trophic structure of the southern Benguela before and after the onset of industrial fishing. African Journal of Marine Science, 30, 351–382. 10.2989/AJMS.2008.30.2.11.561
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2008

Model application

26
Bonfil, Ramon; Munro, Gordon; Valtysson, Hreidar Tor; Wright, Miriam; Preikshot, David; Haggan, Nigel; Pauly, Daniel; Sumaila, Ussif Rashid; Pitcher, Tony J.; 1998. Distant water fleets : an ecological, economic and social assessment. , , . 10.14288/1.0074783
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1998

Model application

54
Alder, Jackie; Guénette, Sylvie; Beblow, Jordan; Cheung, William; Christensen, Villy; 2007. Ecosystem-based global fishing policy scenarios. , , . 10.14288/1.0074764
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2007

Model application

27
Ainsworth, Cameron H.; 2006. Strategic marine ecosystem restoration in northern British Columbia. , , . 10.14288/1.0074895
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2006

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28
Pitcher, Tony J.; Pauly, Daniel; Hart, Paul J. B.; 1998. Reinventing Fisheries Management. In: (eds.).. .
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1998

Model application

47
Blanco, Juan A.; Cisneros-Montemayor, Andrés M.; 2013. Modelos ecológicos para analizar el papel económico de los peces de forraje. In: (eds.)Aplicaciones de modelos ecológicos a la gestión de recursos naturales.. 67–76.
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2013

Model application

2
Stanford, Richard; Pitcher, Tony; 2004. Ecosystem simulations of the English Channel : climate and trade-offs. , , . 10.14288/1.0074799
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2004

Model application

31
Okey, Thomas A.; D. (Daniel), Pauly; 2017. Trophic Mass-Balance Model of Alaska’s Prince William Sound Ecosystem, for the Post-Spill Period 1994-1996 : 2nd Edition. , , . 10.14288/1.0354483
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2017

Model application

85
Kruse, G.H.; Gallucci, V.F.; Hay, D.E.; Perry, R.I.; Peterman, R.M.; Shirley, T.C.; Spencer, P.D.; Wilson, B.; Woodby, D.; Ainsworth, C.H.; Pitcher, T,J,; 2005. Using Local Ecological Knowledge in Ecosystem Models. In: (eds.)Fisheries Assessment and Management in Data-Limited Situations.. 289–304.
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2005

Model application

23
Haggan, Nigel; Pitcher, Tony; 2005. Ecosystem simulation models of Scotland's West Coast and sea lochs. , , . 10.14288/1.0074795
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2005

Model application

18
Pitcher, Tony J.; Ainsworth, Cameron H.; Bailey, Megan; 2007. Ecological and economic analyses of marine ecosystems in the Bird's Head Seascape, Papua, Indonesia: I. , , . 10.14288/1.0074756
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2007

Model application

12
Watkinson, Stephen; 2001. Life after death : the importance of salmon carcasses to watershed function. , , . 10.14288/1.0074867
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2001

Model application

6
Preikshot, David; Beattie, Alasdair; 2017. Fishing for answers : ecosystem dynamics, trophic shifts, and salmonid population changes in South Puget Sound, WA, 1970-1999. , , . 10.14288/1.0348149
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2017

Model application

6

Model application

5
Buchanan, Gary A.; Belton, Thomas J.; Paudel, Bhanu; 2017. The Comprehensive Barnegat Bay Research Program. Journal of Coastal Research, 78, 1–6. 10.2112/SI78-001.1
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2017

Model application

0
Zeller, Dirk; Booth, Shawn; Mohammed, Elizabeth; Pauly, Daniel; 2003. From Mexico to Brazil : Central Atlantic fisheries catch trends and ecosystem models. , , . 10.14288/1.0074792
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2003

Model application

39
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Nr. of publications: 439
Total citations: 16406
h-index: 61
m-quotient: 2.35

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