Model:Bio

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Bio

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Summary Contact Technical specs In/Output Process Testing Other Component info Also known as Model type Single Model part of larger framework Note on status model Date note status model Incorporated models or components: Spatial dimensions Spatial extent Model domain Marine One-line model description Biogenic mixing of marine sediments Extended model description Biogenic mixing of marine sediments Keywords: sediment transport, Name Eric Hutton Type of contact Model developer Institute / Organization CSDMS, INSTAAR, University of Colorado Postal address 1 1560 30th street Postal address 2 Town / City Boulder Postal code 80305 State Colorado Country United States Email address huttone@colorado.edu Phone Fax Name Bjarte Hannisdal Type of contact Institute / Organization Postal address 1 Postal address 2 Town / City Postal code State Country Email address Phone Fax Supported platforms Unix, Mac OS, Windows Other platform Programming language C Other program language Code optimized Single Processor Multiple processors implemented Nr of distributed processors Nr of shared processors Start year development 2008 Does model development still take place? Yes If above answer is no, provide end year model development Code development status When did you indicate the 'code development status'? Model availability Source code availability (Or provide future intension) Through web repository Source web address https://github.com/mcflugen/sedflux Source csdms web address Program license type GPL v2 Program license type other Memory requirements 1GB at the most Typical run time Seconds to minutes Describe input parameters Input format ASCII Other input format Describe output parameters Output format ASCII Other output format Pre-processing software needed? No Describe pre-processing software Post-processing software needed? No Describe post-processing software Visualization software needed? No If above answer is yes Other visualization software Describe processes represented by the model Describe key physical parameters and equations Describe length scale and resolution constraints Describe time scale and resolution constraints Describe any numerical limitations and issues Describe available calibration data sets Upload calibration data sets if available: Describe available test data sets Upload test data sets if available: Describe ideal data for testing Do you have current or future plans for collaborating with other researchers? Is there a manual available? No Upload manual if available: Model website if any Model forum / discussion board Comments This part will be filled out by CSDMS staff OpenMI compliant No but possible BMI compliant No but possible WMT component No but possible PyMT component Is this a data component DOI model 10.1594/IEDA/100099 For model version 0.1 Year version submitted 2011 Link to file https://csdms.colorado.edu/pub/models/doi-source-code/sedflux-10.1594.IEDA.100161-2.1.tar.gz Can be coupled with:

Model info Authors Eric Hutton Hannisdal Source code Go to external source code site DOI Download Bio version: 0.1 Doi: 10.1594/IEDA/100099 Model citations Nr. of publications: 4 Total citations: 511 h-index: 3 m-quotient: 0.08 QR-code Link to this page Other models by author Avulsion Bing Bio Diffusion Flexure Inflow Plume Sedflux Subside WAVEWATCH III Data Component

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Nr. of publications:	4
Total citations:	511
h-index:	3
m-quotient:	0.08

Featured publication(s)	Year	Model described	Type of Reference	Citations
Boudreau, B.P. 1986. Mathematics of tracer mixing in sediments: 1. Spatially dependent, Diffusive mixing. American Journal of Science, 286, 161~198. 10.2475/ajs.286.3.161 (View/edit entry)	1986	Bio	Model overview	271
Boudreau, B.P.; 1986. Mathematics of thacer mixing in sediments: 2. Nonlocal mixing and biological conveyor-belt phenomena. American Journal of Science, 286, 199~238. 10.2475/ajs.286.3.199 (View/edit entry)	1986	Bio	Model overview	185
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