Model:CarboCAT: Difference between revisions

From CSDMS
m (add model questionnaire carbocat)
 
m (Text replacement - "{{End headertab}}" to "{{End headertab}} {{{{PAGENAME}}_autokeywords}}")
 
(54 intermediate revisions by 3 users not shown)
Line 1: Line 1:
{{Infobox Model
{{Model identity
|model name              = CarboCAT
|Model type=Single
|developer                = '''Burgess''', Peter
|one-line-description    = Carbonate cellular automatacyclicity   
|type                     = Model
|source                  = [[image:Red1.png]]
}}
}}
<!-- Edit the part above to update info on other papers -->
{{Start models incorporated}}
 
{{End a table}}
== CarboCAT ==
{{Model identity2
__TOC__
|ModelDomain=Carbonates and Biogenics
 
|One-line model description=Carbonate cellular automatacyclicity
===Introduction===
|Extended model description=CarboCAT uses a cellular automata to model horizontal and vertical distributions of carbonate lithofacies
 
}}
=== History ===
{{Start model keyword table}}
 
{{Model keywords
=== Papers ===
|Model keywords=carbonate lithofacy
 
}}
=== CarboCAT Questionnaire ===
{{Model keywords
 
|Model keywords=cellular automatacyclicity
==== Contact Information ====
}}
 
{{End a table}}
{| class="wikitable"
{{Modeler information
| class="model_col1"| Model:
|First name=Peter
| class="model_col2"| CarboCAT
|Last name=Burgess
|-
|Type of contact=Model developer
| class="model_col1"| Contact person:
|Institute / Organization=Shell International E&P
| class="model_col2"| Peter Burgess (Model developer)
|Town / City=Rijswijk
|-
|Postal code=2288 GS
| class="model_col1"| Institute:
|Country=Netherlands
| class="model_col2"| Royal Holloway University of London
|Email address=p.burgess@es.rhul.ac.uk
|-
|Phone=+(31) 610 97 3376
| class="model_col1"| City:
}}
| class="model_col2"|
{{Model technical information
|-
|Supported platforms=Windows
| class="model_col1"| Country:
|Programming language=Matlab
| class="model_col2"|
|Start year development=2008
|-
|Does model development still take place?=Yes
| class="model_col1"| Email:
|DevelopmentCode=Active
| class="model_col2"| p.burgess@es.rhul.ac.uk
|DevelopmentCodeYearChecked=2020
|-
|Model availability=As code
| class="model_col1"| 2nd person involved:
|Source code availability=Through CSDMS repository
| class="model_col2"| --
|Source csdms web address=https://github.com/csdms-contrib/carbocat
|-
|Program license type=GPL v2
| class="model_col1"| 3rd person involved:
|Typical run time=5 minutes
| class="model_col2"| --
}}
|}
{{Input - Output description
 
|Describe input parameters=Production and subsidence rates, cellular automata rules (number of seed neighbours etc), sea-level history
==== Model description ====
|Input format=ASCII
 
|Describe output parameters=Chronostrat plots, maps, cross-sections, lithofacies thickness distributions
{| class="wikitable" 
|Output format=ASCII
| class="model_col1"| Model type:
|Pre-processing software needed?=No
| class="model_col2"| Single model for the carbonate domain.
|Post-processing software needed?=Yes
|-
|Describe post-processing software=Yes, Matlab routines
| class="model_col1"| Description:
|Visualization software needed?=Yes
| class="model_col2"| CarboCAT uses a cellular automata to model horizontal and vertical distributions of carbonate lithofacies
|If above answer is yes=Matlab
|}
}}
 
{{Process description model
==== Technical information ====
|Describe processes represented by the model=Subsidence
 
Depth dependent carbonate production
{| class="wikitable" 
| class="model_col1"| Supported platforms:
| class="model_col2"| Windows
|-
| class="model_col1"| Programming language:
| class="model_col2"| Matlab
|-
| class="model_col1"| Model was developed started from:
| class="model_col2"| 2008 and development still takes place
|-
| class="model_col1"| To what degree will the model become available:
| class="model_col2"| As code
|-
| class="model_col1"| Current license type:
| class="model_col2"| GPL v2
|-
| class="model_col1"| Memory requirements:
| class="model_col2"| --
|-
| class="model_col1"| Typical run time:
| class="model_col2"| 5 minutes
|}
 
==== Input / Output description ====
 
{| class="wikitable" 
| class="model_col1"| Input parameters:
| class="model_col2"| Production and subsidence rates, cellular automata rules (number of seed neighbours etc), sea-level history
|-
| class="model_col1"| Input format:
| class="model_col2"| ASCII
|-
| class="model_col1"| Output parameters:
| class="model_col2"| Chronostrat plots, maps, cross-sections, lithofacies thickness distributions  
|-
| class="model_col1"| Output format:
| class="model_col2"| ASCII
|-
| class="model_col1"| Post-processing software (if needed):
| class="model_col2"| Yes, Matlab routines
|-
| class="model_col1"| Visualization software (if needed):
| class="model_col2"| Yes, Matlab.
|}
 
==== Process description ====
 
{| class="wikitable" 
| class="model_col1"| Processes represented by model:
| class="model_col2"| Subsidence<br>
Depth dependent carbonate production <br>
Lithofacies spatial distribution based on number of neighoubrs of same facies type
Lithofacies spatial distribution based on number of neighoubrs of same facies type
|-
|Describe key physical parameters and equations=Subsidence rates
| class="model_col1"| Key physical parameters & equations:
Production rates
| class="model_col2"| Subsidence rates<br>
Production rates<br>
CA rules, number of seed neighbours etc
CA rules, number of seed neighbours etc
|-
|Describe length scale and resolution constraints=No intrinsic constraints
| class="model_col1"| Length scale & resolution constraints:
|Describe time scale and resolution constraints=Short time steps required for accuracy of production rate calculation
| class="model_col2"| No intrinsic constraints
|Describe any numerical limitations and issues=--
|-
}}
| class="model_col1"| Time scale & resolution constraints:
{{Model testing
| class="model_col2"| Short time steps required for accuracy of production rate calculation
|Describe available test data sets=Burgess (2008)
|-
|Describe ideal data for testing=Carbonate lithofacies thickness distributions
| class="model_col1"| Numerical limitations and issues :
}}
| class="model_col2"| --
{{Users groups model
|}
|Do you have current or future plans for collaborating with other researchers?=--
}}
{{Documentation model
|Manual model available=No
}}
{{Additional comments model
|Comments=--
}}
{{CSDMS staff part
|OpenMI compliant=No but possible
|IRF interface=No but possible
|CMT component=No but possible
|CCA component=No but possible
}}
{{Start coupled table}}
{{End a table}}
{{End headertab}}
{{{{PAGENAME}}_autokeywords}}


==== Testing ====
<!-- Edit the part above to update info on other papers -->
 
{| class="wikitable" 
| class="model_col1"| Available calibration data sets:
| class="model_col2"| --
|-
| class="model_col1"| Available test data sets:
| class="model_col2"| Burgess (2008)
|-
| class="model_col1"| Ideal data for testing:
| class="model_col2"| Carbonate lithofacies thickness distributions
|}
 
====User groups ====
 
{| class="wikitable" 
| class="model_col1"| Currently or plans for collaborating with:
| class="model_col2"| --
|}
 
==== Documentation ====
 
{| class="wikitable" 
| class="model_col1"| Key papers of the model:
| class="model_col2"| Burgess (in prep)
|-
| class="model_col1"| Is there a manual available:
| class="model_col2"| No
|-
| class="model_col1"| Model website if any:
| class="model_col2"| --
|}
 
==== Additional comments ====
 
{| class="wikitable" 
| class="model_col1"| Comments:
| class="model_col2"| --
|}


=== Issues ===


=== Help ===
==Introduction==


=== Input Files ===
== History ==
Development of the model began in 2005 as an Excel Visual Basic programme. Conversion to Matlab started in 2008. Downloadable version here is still a prototype and requires further testing. Development is ongoing, mostly focussed on development of sediment transport algorithms.


=== Output Files ===
== References  ==
<br>{{AddReferenceUploadButtons}}<br><br>
{{#ifexist:Template:{{PAGENAME}}-citation-indices|{{{{PAGENAME}}-citation-indices}}|}}<br>
{{Include_featured_references_models_cargo}}<br>


=== Download ===
== Issues ==


=== Source ===
== Help ==
Contact [mailto:p.burgess@rhul.ac.uk p.burgess@rhul.ac.uk]


== Input Files ==
The main input file defines parameter values and filenames of several secondary input files. A parameter file example.txt and ll the other files indicated in example.txt are given with the source code and the GUI is set to load this parameter file as a default setting.


[[Category:Carbonate]]
== Output Files ==

Latest revision as of 20:19, 16 September 2020



CarboCAT


Metadata

Also known as
Model type Single
Model part of larger framework
Note on status model
Date note status model
Incorporated models or components:
Spatial dimensions
Spatial extent
Model domain Carbonates and Biogenics
One-line model description Carbonate cellular automatacyclicity
Extended model description CarboCAT uses a cellular automata to model horizontal and vertical distributions of carbonate lithofacies
Keywords:

carbonate lithofacy, cellular automatacyclicity,

Name Peter Burgess
Type of contact Model developer
Institute / Organization Shell International E&P
Postal address 1
Postal address 2
Town / City Rijswijk
Postal code 2288 GS
State
Country Netherlands
Email address p.burgess@es.rhul.ac.uk
Phone +(31) 610 97 3376
Fax


Supported platforms
Windows
Other platform
Programming language

Matlab

Other program language
Code optimized
Multiple processors implemented
Nr of distributed processors
Nr of shared processors
Start year development 2008
Does model development still take place? Yes
If above answer is no, provide end year model development
Code development status Active
When did you indicate the 'code development status'? 2020
Model availability As code
Source code availability
(Or provide future intension) 		Through CSDMS repository
Source web address
Source csdms web address https://github.com/csdms-contrib/carbocat
Program license type GPL v2
Program license type other
Memory requirements
Typical run time 5 minutes


Describe input parameters Production and subsidence rates, cellular automata rules (number of seed neighbours etc), sea-level history
Input format ASCII
Other input format
Describe output parameters Chronostrat plots, maps, cross-sections, lithofacies thickness distributions
Output format ASCII
Other output format
Pre-processing software needed? No
Describe pre-processing software
Post-processing software needed? Yes
Describe post-processing software Yes, Matlab routines
Visualization software needed? Yes
If above answer is yes Matlab
Other visualization software


Describe processes represented by the model Subsidence

Depth dependent carbonate production Lithofacies spatial distribution based on number of neighoubrs of same facies type

Describe key physical parameters and equations Subsidence rates

Production rates CA rules, number of seed neighbours etc

Describe length scale and resolution constraints No intrinsic constraints
Describe time scale and resolution constraints Short time steps required for accuracy of production rate calculation
Describe any numerical limitations and issues --


Describe available calibration data sets
Upload calibration data sets if available:
Describe available test data sets Burgess (2008)
Upload test data sets if available:
Describe ideal data for testing Carbonate lithofacies thickness distributions


Do you have current or future plans for collaborating with other researchers? --
Is there a manual available? No
Upload manual if available:
Model website if any
Model forum / discussion board
Comments --


This part will be filled out by CSDMS staff

OpenMI compliant No but possible
BMI compliant No but possible
WMT component No but possible
PyMT component
Is this a data component
Can be coupled with:
Model info
Authors
Peter Burgess
Source code
Model citations
Nr. of publications: 7
Total citations: 29
h-index: 2
m-quotient: 0.18
QR-code
Qrcode CarboCAT.png
Link to this page
Other models by author



Introduction

History

Development of the model began in 2005 as an Excel Visual Basic programme. Conversion to Matlab started in 2008. Downloadable version here is still a prototype and requires further testing. Development is ongoing, mostly focussed on development of sediment transport algorithms.

References



Nr. of publications: 7
Total citations: 29
h-index: 2
m-quotient: 0.18



Featured publication(s)YearModel describedType of ReferenceCitations
Burgess, Peter M.; 2013. CarboCAT: A cellular automata model of heterogeneous carbonate strata. Computers &amp; Geosciences, 53, 129–140. 10.1016/j.cageo.2011.08.026
(View/edit entry)		2013 CarboCAT
 Model overview 20
Masiero, Isabella; Kozlowski, Estanislao; Antonatos, Georgios; Xi, Haiwei; Burgess, Peter; 2020. Numerical stratigraphic forward models as conceptual knowledge repositories and experimental tools: An example using a new enhanced version of CarboCAT. Computers &amp; Geosciences, 138, 104453. 10.1016/j.cageo.2020.104453
(View/edit entry)		2020 CarboCAT
 Model overview 2
See more publications of CarboCAT


Issues

Help

Contact p.burgess@rhul.ac.uk

Input Files

The main input file defines parameter values and filenames of several secondary input files. A parameter file example.txt and ll the other files indicated in example.txt are given with the source code and the GUI is set to load this parameter file as a default setting.

Output Files

Retrieved from "https://csdms.colorado.edu/csdms_wiki/index.php?title=Model:CarboCAT&oldid=300110"