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#REDIRECT [[CSDMS_meeting_2019]]
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   |title=<center>''Geoprocesses, geohazards - CSDMS 2018''</center>
   |title=<center>''CSDMS 3.0 - Bridging Boundaries''</center>
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   |section= <br>May 22 -24<sup>th</sup> 2018, Boulder Colorado, USA
   |section= <br>May 21 -23<sup>rd</sup> 2019, Boulder Colorado, USA
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*<font color="red">Optional</font>: May 21<sup>nd</sup> 2018, choose from 2 pre-conference events:
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**[[Form:Annualmeeting2018#Software_Carpentry_bootcamp|bootcamp]]
*<font color="red">Optional</font>: May 20<sup>th</sup> 2019, choose to attend one of the 3 pre-conference events (''see also conference registration''):
**[[Form:Annualmeeting2018#HPC_workshop|HPC workshop]]
**[[Form:Annualmeeting2019#1) Software Carpentry workshop|Carpentry Workshop]]
*<font color="red">Optional</font>: May 25<sup>th</sup> 2018, [[Form:Annualmeeting2018#Post-conference_BMI_Hackathon|post-conference BMI hackathon]]<br><br>
**[[Form:Annualmeeting2019#2) Quantifying Uncertainty in Earth Systems|Quantifying Uncertainty in Earth Systems]]
<div style="float:right;">{{TOC limit|3}}</div><br><br>
<!--**[[Form:Annualmeeting2019#3) HPC workshop|HPC workshop]] -->
=On site registration=
<br><br><div style="float:right;">{{TOC limit|3}}</div>
Now closed.
==Agenda==
<!--The online conference registration is a three step process:
'''<big>[[Media:CSDMS2019Agenda.Final.pdf|Click here to view the final agenda]].</big>'''
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=Registration=
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Registration is closed. See you all soon!
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<big>'''Step 3'''</big>:
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::* '''<font color="red">See notice [[Form:Annualmeeting2018#Reimbursement|reimbursement]]</font>'''
::* '''<font color="red">See notice [[Form:Annualmeeting2019#Reimbursement|reimbursement]]</font>'''
::* '''Academia or Government: $225''' ''(After April 1<sup>st</sup> $300)''<br>
::* '''Early Registration: $200''' ''(After April 1<sup>st</sup> $400)''<br>
::* '''Industry: $450 ''' ''(After April 1<sup>st</sup> $525)''<br>
::* '''Add $30 per joining pre conference events'''
::* '''Add $30 per joining pre or post conference events'''
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::<span class="plainlinks"><div class="btn btn-lg btn-default lienbutton" type="button" style=" padding-top: 0.3cm;">[https://www.regonline.com/CSDMS2018 Pay]</div></span><br><font color="gray" size="0.6">''Third party website''</font>
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<font color="gray">Do you want to make changes to your registration? If so:</font>
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:# <span class="plainlinks">[{{server}}{{localurl:Special:Userlogin|returnto=Form:Annualmeeting2018}} Log in].</span><font color="gray">
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:# Select your ''[[CSDMS_meeting_2018_participant_list|registration record here]]'' and start by clicking on "Edit registration"</font>.--><br><br>
:# Select your ''[[CSDMS_meeting_2019_participant_list|registration record here]]'' and start by clicking on "Edit registration"</font>.<br><br>
 
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=Introduction=
=Introduction=
Natural hazards impact thousands of people every year; floods, droughts, extreme storms, landslides, wildfires, permafrost erosion all change the Earth's surface and inflict tremendous damage to human infrastructure. Most often, humans respond to disasters "after the fact" and a paradigm shift is needed to a strategy of resilience that would provide a way to reduce vulnerability to disasters and their impacts before they occur. Numerical models of earth surface processes are one tool to simulate natural hazards and provide quantitative pre-event risk assessment. Yet, such assessments are only appropriate if the models capture all important physical processes, when the models are tested and well-vetted, when they are useable and proven accurate. This workshop aims to identify what are critical missing components in our ability to provide better assessment of earth surface change in face of natural hazards.
The meeting will bring together experts in earth surface process modeling in a three-day hands-on workshop to identify challenges in bridging boundaries in our current process understanding, both fundamentally in the earth surface processes as well as in the modeling approaches and technology. This includes interdisciplinary boundaries and how best to identify and address these numerically.
The meeting will bring together experts in earth surface process modeling in a three-day hands-on workshop to identify shortcomings in our current natural hazard process understanding, both fundamentally in the earth surface processes as well as in the modeling approaches and technology. The workshop aims to improve natural hazard modeling for risk assessment, with a special focus on building a next-generation cyberinfrastructure and a community of modern modeling and data analysis practice, including high performance computing techniques.
<br>
 
The CSDMS3.0 - Bridging Boundaries 2019 Annual Meeting aims to:
We are pleased to announce that this year's meeting is co-sponsored by the [http://www.sedexp.net Sediment Experimentalist Network (SEN)] and the [http://polar.crc.nd.edu Polar RCN].
# Identify new frontiers in fundamental process understanding of the earth surface. New algorithms, cyberinfrastructure development and new model couplings appear paramount to explore important process dynamics and linkages.
<br><br>
# Identify critical missing components in our ability to overcome model and process boundaries.
 
# Build researcher-to-researcher connections. Better connect earth surface process modelers with modelers of primary and secondary forcings, as well as social sciences and engineers to allow exploration of the human dimensions in earth surface processes.
=Remote Participation=
'''''Only for Remote Participation!''''': Registration for Remote Participation is required in advance (there is no fee for remote participants).  Once you have registered, a link will be forwarded with detailed remote joining instructions. 
'''''<big>Please complete the remote participation registration process for each session you would like to attend:</big>'''''<br><br>
''Tuesday, May 22<sup>nd</sup>''<br>
Morning Session 8:45AM to 11:00AM (MDT): Registration URL: https://cuboulder.zoom.us/meeting/register/2509965e814da87c7510d14dfea9e911<br>
Afternoon Session 3:30PM to 4:15PM (MDT) Registration URL: https://cuboulder.zoom.us/meeting/register/a4bc3cb339df60b234538d7d4481ef37<br>
 
''Wednesday, May 23<sup>rd</sup>''<br>
Morning Session 8:45AM to 10:30AM  (MDT) Registration URL: https://cuboulder.zoom.us/meeting/register/a52f67d87484f1018c34be5db4a05ad8<br>
Wednesday Afternoon: no Plenary talks
 
''Thursday, May 24<sup>th</sup>''<br>
Morning Session 8:45AM to 10:15AM  (MDT) Registration URL: https://cuboulder.zoom.us/meeting/register/b5edf2eeb36415ef4ac87b605f06faf5<br>
Afternoon Session 1:15PM to 5:00PM (MDT) Registration URL: https://cuboulder.zoom.us/meeting/register/53a0449b212add6a66858a512be5123a<br>
<br><br>
 
=Objectives and general description=
Numerical models of earth surface processes are one tool to simulate natural hazards and provide quantitative pre-event risk assessment. Such assessments are only appropriate if the models capture all important physical processes, when the models are tested and well-vetted, when they are useable and proven accurate. The Geoprocesses, geohazards - CSDMS 2018 workshop aims to:
# Identify new frontiers in fundamental process understanding in earth surface and natural hazards modeling. New algorithms, cyberinfrastructure development and new model couplings appear paramount to explore important process dynamics and linkages.
# Identify needs and develop strategies for model testing, model validation and model benchmarking against natural disasters as they happen, and rapidly afterwards. Massive high-resolution topographic data acquisition allows for more rigorous model to real-world data testing, but what are the obstacles and needs for improved use of disasters as opportunities for improving process models?
# Identify what are critical missing components in our ability to provide better assessment of earth surface change in face of natural hazards. How do we design scenario modeling, how do we communicate the uncertainty in model outcomes?
# Built researcher-to-researcher connections. Better connect earth surface process modelers with modelers of primary and secondary forcings, as well as social sciences and engineers to allow exploration of the human dimensions of natural disasters.
 
As in past meetings, keynote speakers are by invitation only, and poster presentations are the general media.
As in past meetings, keynote speakers are by invitation only, and poster presentations are the general media.
The meeting will include:
The meeting will include:
* ''State-of-the art keynote presentations'' in earth-surface dynamics and modeling of natural hazards
* ''State-of-the art keynote presentations'' in earth-surface dynamics
* ''Hands-on clinics'' related to community models, tools and approaches
* ''Hands-on clinics'' related to community models, tools and approaches
* ''Transformative software products and approaches'' designed to be accessible, easy to use, and relevant
* ''Transformative software products and approaches'' designed to be accessible, easy to use, and relevant
* ''Breakout sessions discussing:''
* ''Breakout sessions''
** Fundamentals of earth surface processes and hazard modeling; missing links and model coupling.
** Disasters are opportunities; challenges and needs for validation and benchmarking of process models against extreme events?
** Towards measures of risk: how to include human dimensions of natural disasters in numerical models?
** Hazard assessment: strategies and technological needs for modeling of scenarios of extreme events with future change to improve hazard prevention.
* ''Poster Sessions''
* ''Poster Sessions''
* Consider signing up for the pre- and post-conference meetings as well. See below for more information on these.
* Consider signing up for the pre-conference training sessions as well. See below for more information on these.
<br>
<br>
''Poster Information'': The poster boards are configured for 4' wide by 6' tall (portrait orientation) posters. <br><br>
''Poster Information'': The poster boards are configured for 4' wide by 6' tall (portrait orientation) posters. <br><br>
 
  </div></div>
==Agenda==
  <div class="row"><div class="col-sm-12">
Click [[Media:CSDMS2018FinalAgenda.pdf|here]] to view the draft agenda of 05/7/2018.<br><br>




==Keynote Speakers==
==Keynote Speakers==
 
{{#ask: [[Category:Presentations_DB]][[CSDMS meeting presentation type::Invited oral presentation]][[CSDMS meeting event title::CSDMS3.0 - Bridging Boundaries]]
{{Keynote-clinics
| ?CSDMS meeting first name
| name = Susan Cutter
| ?CSDMS meeting last name
| affiliation = University of South Carolina
| ?CSDMS meeting title presentation
| participants =
| ?CSDMS meeting institute
| theme = disaster vulnerability and resilience science
| ?Country member
| title  = Social Vulnerability and Community Resilience to Natural Hazards: Models, Tools, and Practice
| ?CSDMS meeting abstract presentation|+filter=value |+value filter height=5px |+value filter collapsible=collapsed
| abstract = This presentation provides an overview of two important concepts in natural hazards—social vulnerability and community resilience.  Conceptually, vulnerability and resilience are related, but they are not the opposite extensions of one another.  Instead they are driven by different questions: 1) what circumstances create the social burdens of risk and how do these affect the distribution of risks and losses (e.g. vulnerability); and 2) what enhances or reduces the ability of communities to prepare for, respond to, recover from, successfully adapt to, or anticipate hazard threats, and how does this vary geographically (resilience).  In order to provide the scientific basis for hazard reduction policies and practices, measurement schemes for social vulnerability and community resilience are required. This presentation reviews an existing tool for measuring social vulnerability, the Social Vulnerability Index or SoVI®, which is widely used in the USA in both hazard mitigation planning and disaster recovery.  Emerging metrics for monitoring community resilience are also described, beginning with the Baseline Resilience Indicators for Communities (or BRIC) Index. The spatial patterning and temporal variability in the indices as well as the importance of scale are described.  Practical examples of how BRIC and SoVI have been used in the USA by emergency managers and hazards (spatial) planning are illustrated.
| limit=5000
}}<br>
| sort=CSDMS meeting last name
{{Keynote-clinics
| order=ASC
| name = Joannes Westerink
| format=template
| affiliation = U Notre Dame
| template=MeetingFormKeynote
| participants =
}}
| theme =
<br><br>
| title = Storm surge model ADCIRC for risk assessment
| abstract =
}}<br>
{{Keynote-clinics
| name = Jenny Suckale
| affiliation = Stanford University
| participants =
| theme = modeling complex multi-phase fluid flows for hazard analysis (and especially volcanic processes)
| title =  Multiphase instabilities and extreme events in different natural systems
| abstract = Natural disasters push the process of scientific discovery to its limits: Their enormous scale makes them difficult to recreate in the lab, their destructive power and rare occurrence limit the possibility of acquiring field data, and their profoundly nonlinear behavior over a wide range of scales poses significant modeling challenges. In this talk, I explore how we can leverage insights from four different natural systems to contribute to our fundamental scientific understanding of the role that multiphase processes play in the onset and evolution of extreme events and to our ability to mitigate associated risks.
}}<br>
{{Keynote-clinics
| name = Paul Bates
| affiliation = University of Bristol, UK
| participants =
| theme =
| title =  Modelling flood risk in the continental US
| abstract = Flood modelling at global scales represents a revolution in hydraulic science and has the potential to transform decision-making and risk management in a wide variety of fields. Such modelling draws on a rich heritage of algorithm and data set development in hydraulic modelling over the last 20 years, and is now beginning to yield new insights into current and future flood risk.  This paper reviews this progress and outlines recent efforts to develop a 30m resolution true hydrodynamic model of the entire conterminous US.  The model is built using an automated framework which uses US National Elevation Dataset, the HydroSHEDS river network, regionalised frequency analysis to determine extreme flow and rainfall boundary conditions and the USACE National Levee Dataset to characterize flood defences.  Comparison against FEMA and USGS flood maps shows the continental model to have skill approaching that of bespoke models built with local data.  The paper describes the development and testing of the model, and it use to estimate current and future flood risk in the US using high resolution population maps and development projections.
}}<br>
{{Keynote-clinics
| name = Phaedra Upton
| affiliation = NZ Geoscience
| participants =
| theme = seismically triggered landsliding
| title = Earthquake-induced landslides and landscape dynamics: The 2016 Kaikōura Earthquake and response
| abstract = The Mw 7.8 Kaikōura earthquake was a complex one, rupturing ~20 faults on and offshore including several that had not been recognised as active. It also generated tens of thousands of landslides, hundreds of landslide dams and damaged hillslopes that are now susceptible to failure during rainstorms and aftershocks. The landslide debris, when mobilised, will create new hazards – further landsliding, rapid aggregation, increased river channel instability and will threaten infrastructure into the future. Several large landslides closed State Highway 1 along the Kaikōura coast for over a year forcing major changes to New Zealand’s main transport route from Wellington to Christchurch. The road has reopened but repair work continues and it remains vulnerable to further disruption and closures.<br>These hazards are likely to persist for years to decades, requiring active management but also providing researchers with a natural laboratory with which to quantify post-earthquake landscape dynamics. Researchers in New Zealand and their overseas colleagues started to collect perishable data immediately after the earthquake and are continuing to do so. Repeat LiDAR surveys, ground profiling, field monitoring, laboratory testing and numerical modelling will be integrated to determine how hillslopes and rivers will respond to future forcing events. The goal is to produce an integrated set of predictive tools to manage earthquake and post-earthquake landslide risk.
}}<br>
{{Keynote-clinics
| name = Robert Weiss
| affiliation = Virginia Tech
| participants =
| theme = tsunami hazard assessment
| title =  Simulating the tsunami hazard: quantitative predictions
| abstract = Earthquakes are the most frequent source of classic tsunami waves. Other processes that generate tsunami waves include, landslides, volcanic eruption and meteorite impacts. Furthermore, atmospheric disturbances can also generate tsunami waves or at least tsunami-like waves, but we are just at the beginning of understanding their physics and frequency. Classic tsunami waves long waves with wavelength that are much longer than the water depth. For earthquake-generated tsunami waves that is true. However, landslides and meteorite impacts generate tsunami waves that are shorter which has a profound effect on the tsunami evolution, but no less dangerous.<br>Fortunately, tsunamis do not occur frequently enough in any given region to make meaningful prediction of the future tsunami hazard based only on recorded history. The geologic record has to be interrogated. The inversion of meaningful and quantitative data from the geologic record is the main goal of my research. However, there are problems with the geologic record. The most important problem is that we often have trouble to identify tsunami deposits. Second, it is very often difficult to separate the tsunami record from the storm record in regions where storms and tsunamis are competing agents of coastal change. Other problems are concerned with he completeness of the deposits, but also the fact that sedimentary environment before the tsunami hit most likely was eroded is no longer part of the record makes inversion especially tricky. In my research, I assume that the tsunami deposit is identified, but perhaps not complete and what we know about the pre-event conditions is limited.<br>My talk will cover how the geologic record is used to invert quantitative information about the causative process. We are going to look at grain sizes from sand to boulders and what we can learn from the transport of these very different grain sizes about tsunamis and their impacts along respective coastal areas. The models that are employed to invert flow characteristics from deposits are based on Monte-Carlo simulations to overcome the issue of not knowing the pre-tsunami conditions with great confidence. If time permits, we also see how sea-level change affects tsunami impact at the coast.
}}<br>
{{Keynote-clinics
| name = Terry Idol
| affiliation = Open Geospatial Consortium (OGC)
| participants =
| theme = geodetic data for understanding earth-surface processes and related hazards
| title = Disasters: Increasing Interoperability for User-driven State-of-the-Art Data and Models
| abstract = How can we increase the diversity, richness and value of Spatial Data Infrastructure (SDI) to the Disasters and Natural Hazards community stakeholders? We’ll look at some of the current (and past) Open Geospatial Consortium initiatives to examine exciting work to enable sharing of complex data and models within the community using open standards.
}}<br>
{{Keynote-clinics
| name = Mike Willis
| affiliation = University of Colorado, Boulder
| participants =  
| theme = geodetic data for understanding earth-surface processes and related hazards
| title = Private Eyes are Watching You
| abstract = The National Science Foundation and the National Geospatial Intelligence Agency have a commercial imagery agreement that provides very high resolution DigitalGlobe Inc satellite imagery to the science community. We have leveraged this imagery, high performance computing and open source workflows and code to produce tens of thousands of digital surface models. We have successfully produced repeat topography timeseries for over one fifth of the entire planet. I will show examples of current projects to examine inundation risks at the 20 largest port cities around the globe, landslides and earth ruptures that occurred during the November 2016 Kaikoura earthquake in New Zealand and assessment of ice mass changes at all latitudes.
}}<br>
{{Keynote-clinics
| name = David George
| affiliation = USGS Cascades Volcano Observatory
| participants =  
| theme = modeling debris-flow hazards with GEOCLAW
| title = Modeling earth-surface flow hazards with D-Claw
| abstract = D-Claw is an extension of the software package GeoClaw (www.clawpack.org) for simulating flows of  granular-fluid mixtures with evolving volume fractions. It was developed primarily for landslides, debris flows and related phenomena by incorporating principles of solid, fluid and soil mechanics. However, because the two-phase model accommodates variable phase concentrations, it can also be used to model fluid problems in the absence of solid content (the model equations reduce to the shallow water equations as the solid phase vanishes). We therefore use D-Claw to seamlessly simulate multifaceted problems that involve the interaction of granular-fluid mixtures and bodies of water. This includes a large number of cascading natural hazards, such as debris-avalanches and lahars that enter rivers and lakes, landslide-generated tsunamis, landslide dams and outburst floods that entrain debris, and debris-laden tsunami inundation. I will describe the basis of D-Claw's model equations and highlight some recent applications, including the 2015 Tyndall Glacier landslide and tsunami, potential lahars on Mt. Rainier that displace dammed reservoirs, and a hypothetical landslide-generated lake outburst flood near Sisters, Oregon.
}}<br>
{{Keynote-clinics
| name = Chris Jenkins
| affiliation = University of Colorado, Boulder
| participants =
| theme = BOEM Project
| title  = Scale- and Process-Jumps in  a Multimodel Project on Hurricane Impacts at the Seabed
| abstract = The multi-institution project "Shelf-Slope Sediment Exchange in the Northern Gulf of Mexico..." used a chain of models to examine the effect of hurricanes on the seabed in the Gulf of Mexico and their effect on infrastructure. The components were ROMS (Rutgers U) for weather, wave climate and currents; CSTMS (VIMS) for sediment transport, WBMsed for river discharges and hurriSlip for sediment failures and gravity ignitions (U Colorado), LES/RANS-TURBINS (U California, Santa Barbara) for downslope turbidity currents. The project was an ambitious testing of the ability of these models to connect, and achieved most of the goals set out. The test case was 3 years of oceanographic data for Louisiana-Mississippi-Alabama including storms Dolly, Gustav, and Ike.<br>Connection between the models was a challenge on several levels. (i) Physical dimensionalities of the models were between 3D, 2.5D, 2D, and pointwise 0D. Model resolutions also varied. (ii) The models also reported daily, 3-hourly, or event- based responses.  However different spatial and temporal scales in nature are observed to show different variances on aspects like sediment, and event return-time scalings. These are an added, often unforeseen difficulty for assembling multi-models,and validating them with data. (iii) Important process-jumps are involved in the total chain of sediment transport. Perhaps the most riveting are seabed mass-failures, and turbidity-current ignitions. Actually, separate modules often requiring energy considerations are required to handle such sharp phase-changes - sections of metastable deposits on the seafloor becoming slides, and of advecting suspended sediment layers becoming turbulent gravity flows.
}}<br>
{{Keynote-clinics
| name = Joel Johnson
| affiliation = University of Texas, Austin
| participants =
| theme =
| title  = Using tsunami sediment transport experiments to improve paleohydraulic inverse models
| abstract = Joel Johnson, Katie Delbecq, Wonsuck Kim, David Mohrig<br>Department of Geological Sciences, The University of Texas at Austin<br><br>Tsunami deposits can imperfectly record the hydraulic conditions of devastating extreme events. Sand entrainment, advection and deposition in these events occurs under strongly disequilibrium conditions in which traditional sediment transport models behave poorly. Quantitative models relating sediment characteristics to flow hydraulics hold the potential to improve coastal hazard assessments.  However, data from recent natural tsunamis have rarely been accurate enough, over a range of parameter space, to quantitatively test proposed inverse models for predicting flow characteristics.  To better understand how to “read” flow depth and velocity from disequilibrium deposits, we conducted controlled and repeatable laboratory flume experiments in which different grain size distributions (GSDs) of sand were entrained, transported and deposited by hydraulic bores.  The bores were created by impounding and instantaneously releasing ~6 m^3 of water with a computer-controlled lift gate. The experiments represent 1/10 to 1/100 scale physical models of large events.  Both flow characteristics (including Froude numbers) and suspended sediment transport characteristics (including Rouse numbers and grain size trends) scale consistently with documented natural tsunamis.<br>We use the experimental data to interpret how entrainment, transport and mixing influence deposit GSDs along the flume.  Suspension-dominated deposits get finer and thinner in the direction of transport. The data show that two key controls on GSDs along the flume are (a) the size distribution of the sediment source, and (b) turbulent dispersion of grains.  First, the influence of source GSDs on deposit GSDs is strongest near the sediment source.  Size-dependent suspension and settling become increasingly important farther down the flume.  Transport distances of 1-2 advection length scales are required for deposit GSDs to be sensitive to flow hydraulics.  Second, turbulent dispersion strongly influences local deposit GSDs.  Importantly, intermediate deposit grain size percentiles (e.g. D50) are less sensitive to dispersive transport than either the fine or coarse tails of local deposit GSDs.  Using deposit GSDs along the flume, an advection-settling model best predicts flow depths and velocities when calculated for intermediate percentiles (e.g. D50), rather than for coarse size fractions (e.g. D95) as has been assumed in previous works.  We also highlight areas where our knowledge and predictive ability is limited and could be improved using experiments, including understanding the degree to which grain size sorting occurs during entrainment into suspension, and also during energetic bedload transport.  Overall, the work suggests that physical models of tsunami sediment transport and deposition are invaluable for evaluating equation assumptions, benchmarking model results, and rigorously evaluating model uncertainties.
}}<br>
{{Keynote-clinics
| name = Julio Hoffiman Mendes
| affiliation = Stanford University
| participants =
| theme =
| title  = ImageQuilting.jl: A code for generating 3D stratigraphy from data collected in flume experiments
| abstract = Surface processes are constantly reworking the landscape of our planet with perhaps the most diverse and beautiful patterns of sediment displacement known to humanity. Capturing this diversity is important for advancing our knowledge of systems, and for sustainable exploitation of natural resources by future generations. From a modeler's perspective, great diversity comes with great uncertainty. Although it is understandably very hard to quantify uncertainty about geological events that happened many years ago, we argue that modeling this uncertainty explicitly is crucial to improve our understanding of subsurface heterogeneity, as stratigraphy is direct function of surface processes. In this modeling work (and code), we aim to build realistic stratigraphic models that are constrained to local data (e.g. from wells, or geophysics) and that are, at the same time, subject to surface processes reflected in flume records. Experiments have improved tremendously in recent years, and the amount of data that they generate is posing new challenges to the surface processes community, who is asking more often the question "How do we make use of all this?" Traditional models based on differential equations and constitutive laws are not flexible enough to digest this information, nor were they created with this purpose. The community faces this limitation where the models cannot be conditioned on experiments, and even after exhaustive manual calibration of unobserved input parameters, these models often show poor predictive power. Our choice of inverse modeling and (geo)statistics (a.k.a. data science) was thus made knowing that these disciplines can provide the community with what we need: the ability to condition models of stratigraphy to measurements taken on a flume tank.
}}<br>
{{Keynote-clinics
| name = Rachel Glade
| affiliation = University of Colorado, Boulder
| participants =
| theme =
| title  = Modeling blocky hillslope evolution in layered landscapes
| abstract = Landscapes developed in rock layers of differing erodibility are common on Earth, as well as on other planets. Hillslopes carved into the soft rock are typically characterized by steep, linear-to-concave up slopes or “ramps” mantled with material derived from the resistant layers above, often in the form of large blocks. To better understand the role of sediment size in hillslope evolution, we developed a 1-D numerical model of a hogback. The hybrid continuum-discrete model uses a traditional continuum treatment of soil transport while allowing for discrete, rules-based motion of large blocks of rocks. Our results show that feedbacks between weathering and transport of the blocks and underlying soft rock can create relief over time and lead to the development of concave-up slope profiles in the absence of rilling processes. In addition, the model reaches a quasi-steady state in which the topographic form and length of the ramp remains constant through time. We use an analytic approach to explore the mechanisms by which our model self-organizes to this state, including adjustment of soil depth, erosion rates, and block velocities along the ramp. An agreement of analytic solutions with the model shows that we understand its behavior well, and can carefully explore implications for hillslope evolution in the field. Current work explores the interactions between blocky hillslopes and channels in a 2-D numerical model built in Landlab. Our models provide a framework for exploring the evolution of layered landscapes and pinpoint the processes for which we require a more thorough understanding to predict their evolution over time.
}}<br>
{{Keynote-clinics
| name = Jannis Hoch
| affiliation = Utrecht University
| participants =
| theme =
| title  = GLOFRIM – A globally applicable framework for integrated hydrologic-hydrodynamic modeling
| abstract = Economic losses and casualties due to riverine flooding increased in past decades and are most likely to further increase due to global change. To plan effective mitigation and adaptation measures and since floods often affect large areas showing spatial correlation, several global flood models (GFMs) were developed. Yet, they are either based on hydrologic or on hydrodynamic model codes. This may lower the accuracy of inundation estimates as large-scale hydrologic models often lack advanced routing schemes, reducing timeliness of simulated discharge, while hydrodynamic models depend on observed discharge or synthesized flood waves, hampering the representation of intra-domain processes.<br>To overcome this, GLOFRIM was developed. Currently, it allows for coupling one global hydrologic model, producing discharge and runoff estimates, with two hydrodynamics which perform the routing of surface water. By employing the Basic Model Interface (BMI) concept, both online and spatially explicit coupling of the models is supported. This way the coupled models remained unaffected, facilitating the separate development, storage, and updating of the models and their schematizations. Additionally, the framework is developed with easy accessibility and extensibility in mind, which allows other models to be added without extensive re-structuring. <br>In this presentation, the main underlying concepts of GLOFRIM as well as its workflow will be outlined, and first results showing the benefit of model coupling will be discussed. Besides, current limitations and need for future improvements will be pointed out. Last, current developments in code development, applications, and integrations with other research fields will be presented and discussed.
}}<br><br>


==Clinic Leaders==
==Clinic Leaders==
{{Keynote-clinics
{{#ask: [[Category:Presentations_DB]][[CSDMS meeting presentation type::Clinic]][[CSDMS meeting event title::CSDMS3.0 - Bridging Boundaries]]
| name = Irina Overeem
| ?CSDMS meeting first name
| affiliation = CU, CSDMS-IF
| ?CSDMS meeting last name
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics2_2018::4) Permafrost Toolbox]]|format=count}}<br>
| ?CSDMS meeting title presentation
| title = Permafrost Toolbox
| ?CSDMS meeting institute
| abstract = Instructors: Irina Overeem, Kang Wang, Elchin Jafarov<br><br>Permafrost is one of the Arctic climate indicators, and feedback of thawing permafrost to earth surface processes and vice versa is a research frontier. Observations can assess the current state of permafrost, but models are eventually essential to make predictions of future permafrost state and impacts on surface processes. In this 2hr clinic, we will present a new, easy-to-access and comprehensive cyberinfrastructure for permafrost modeling. The ‘Permafrost Modeling Toolbox’ includes three permafrost models of increasing complexity. The tools are embedded within the Community Surface Dynamics Modeling System Web Modeling Tool. We include multiple sets of sample inputs, representing a variety of climate and soil conditions and locations, to enable immediate use of the tools.<br>The hands-on clinic teaches students and researchers how to run and use several permafrost models with associated datasets. The presented models are envisioned to be the suitable for quick exploration of hypotheses and for teaching purposes. We will also explore options for model coupling, demonstrating an example of a model of coastal/delta sedimentation in permafrost environments.
| ?Country member
}}<br>
| ?CSDMS meeting abstract presentation
{{Keynote-clinics
| limit=5000
| name = Sediment Experimentalist Network (SEN)
| sort=CSDMS meeting last name
| affiliation =
| order=ASC
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics1_2018::4) Sediment Experimentalist Network]]|format=count}}<br>Max attendees: 25 <font color="red">Closed!</font>
| format=template
| title = Sediment Experimentalist Network (SEN) - Wrangling your research data
| template=MeetingFormKeynote
| abstract = The earth-surface science community is producing increasing volumes of data in laboratory, numerical, and field studies. What new tools and resources can help us wrangle these data into meaningful scientific knowledge? Wherever you might be in the research lifecycle – planning experiments, preparing a manuscript, or recovering old data from hard drives – this year’s Sediment Experimentalist Network (SEN) clinic will inform you on leading practices for data planning, management, and publication.<br>In recent years, policies and tools have evolved with the potential to greatly increase our efficiency in dealing with scientific data. We’ll cover topics that will help throughout the data and experimental lifecycle, including the SEN Knowledge Base (sedexp.net), the growing collection of research data repositories, and AGU’s Enabling FAIR data project.<br>Enrollees will be contacted a couple weeks prior to the CSDMS meeting to engage in some brief pre-workshop activities to prepare for the clinic. We encourage participants to come prepared with information about their research projects, from which we can engage in practical discussions about data planning and management.
}}
}}<br>
<br>
{{Keynote-clinics
<font color="gray">''Interested in providing a clinic during a next annual meeting? Contact [mailto:csdms@colorado.edu CSDMS@Colorado.EDU].''</font>
| name = Guy Schumann<sup>1,2</sup> and Jeffrey Neal<sup>1</sup>
<br><br>
| affiliation = <sup>1</sup> University of Bristol, UK, <sup>2</sup> Remote Sensing Solutions Inc., Monrovia, CA, USA
  </div></div>
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics1_2018::3) LISFlood]]|format=count}}<br>Max. attendees: 20 <font color="red">Closed!</font>
  <div class="row"><div class="col-sm-12">
| title = LISFLOOD-FP Clinic: Introduction to Flood Hazard Modeling
| abstract = Flooding is one of the costliest natural disasters and recent events, including several hurricanes as well as flash floods, have been particularly devastating. In the US alone, the last few years have been record-breaking in terms of flood disasters and triggered many reactions in public opinions. Governments are now reviewing the available information to better mitigate the risks from flooding.<br>Typically, in the US, flood hazard mapping is done by federal agencies (USACE, FEMA and USGS), with traditionally, little room and need for research model development in flood hazard applications. Now, with the advent of the National Water Model, the status quo of flood hazard prediction in the US may be changing; however, inundation extent and floodplain depths in the National Water Model are still under early-stage development.<br>This Clinic provides a beginner introduction to the latest capabilities in large-scale 2-D modeling using the LISFLOOD-FP model developed by the University of Bristol with a nearly 20-year code history.  This model has a very long history in research applications, while the algorithms behind the model made their way also into many existing industry model codes. The session will give participants insights into 2-D flood inundation modeling with LISFLOOD-FP and also a look at more sophisticated sub-grid channel implementations for large-scale application. More specifically, we will look at the data sets needed by the model and then run a simulation of the annual flooding on the Inner Niger Delta in Mali. The Clinic will also give participants the opportunity to look at some high-resolution LiDAR-based model results.
}}<br>
{{Keynote-clinics
| name = Steve Roberts & Mariela Perignon
| affiliation = Australian National University & CU, CSDMS-IF
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics3_2018::3) ANUGA]]|format=count}}
| title = Hydrodynamic modeling using the open source package ANUGA
| abstract = ANUGA is an open source software package capable of simulating small-scale hydrological processes such as dam breaks, river flooding, storm surges and tsunamis. ANUGA is a Python-language model that solves the Shallow Water Wave Equation on an unstructured triangular grid and can simulate shock waves and rapidly changing flows. It was developed by the Australian National University and Geosciences Australia and has an active developer and user community.<br><br>The package supports discontinuous elevation, or ‘jumps’ in the bed profile between neighbouring cells. This has a number of benefits. Firstly it can preserve lake-at-rest type stationary states with wet-dry fronts. It can also simulate very shallow frictionally dominated flow down sloping topography, as typically occurs in direct-rainfall flood models. A further benefit of the discontinuous-elevation approach, when combined with an unstructured mesh, is that the model can sharply resolve rapid changes in the topography associated with e.g. narrow prismatic drainage channels, or buildings, without the computational expense of a very fine mesh. The boundaries between such features can be embedded in the mesh using break-lines, and the user can optionally specify that different elevation datasets are used to set the elevation within different parts of the mesh (e.g. often it is convenient to use a raster digital elevation model in terrestrial areas, and surveyed channel bed points in rivers). The discontinuous-elevation approach also supports a simple and computationally efficient treatment of river walls. These are arbitrarily narrow walls between cells, higher than the topography on either side, where the flow is controlled by a weir equation and optionally transitions back to the shallow water solution for sufficiently submerged flows. This allows modelling of levees or lateral weirs which are much finer than the mesh size.<br><br>This clinic will provide a hands-on introduction to hydrodynamic modeling using ANUGA. We will discuss the structure and capabilities of the model as we build and run increasingly complex simulations involving channels and river walls.  No previous knowledge of Python is required. Example input files will be provided and participants will be able to explore the code and outputs at their own pace.
}}<br>
{{Keynote-clinics
| name = Mark Piper
| affiliation = CU, CSDMS-IF
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics1_2018::2) BMI Live!]]|format=count}}
| title = BMI Live!
| abstract = Mark Piper (mark.piper@colorado.edu) and Eric Hutton (eric.hutton@colorado.edu)<br>CSDMS Integration Facility, University of Colorado, Boulder, CO<br><br>In software engineering, an interface is a set of functions with prescribed names, argument types, and return types. When a developer implements an interface for a piece of software, they fill out the details for each function while keeping the signatures intact. CSDMS has developed the Basic Model Interface (BMI) for facilitating the conversion of an existing model written in C, C++, Fortran, Python or Java into a reusable, plug-and-play component. By design, BMI functions are straightforward to implement. However, when trying to match BMI functions to model behaviors, the devil is often in the details.<br>In this hands-on clinic, we'll take a simple model--an implementation of the two-dimensional heat equation in Python--and together, we'll write the BMI functions to wrap it, preparing it for transformation into a component. As we develop, we’ll explore how to use the wrapped model with a Jupyter Notebook.<br>To get the most out of this clinic, come prepared to code! We'll have a lot to write in the time allotted for the clinic. We recommend that clinic attendees have a laptop with the Anaconda Python distribution installed. We also request that you read over:<br>BMI description (https://csdms.colorado.edu/wiki/BMI_Description)<br>BMI documentation (http://bmi-python.readthedocs.io)<br>before participating in the clinic.
}}<br>
{{Keynote-clinics
| name = Nicole Gasparini
| affiliation = Tulane University
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics2_2018::2) Landlab]]|format=count}}
| title = Landlab with Hydroshare
| abstract = Landlab is a Python toolkit for building, coupling, and exploring two-dimensional numerical models of Earth-surface dynamics. Hydroshare is an online collaborative environment for sharing data and models. Hydroshare allows users to run models remotely, without needing to install software locally. This clinic will illustrate example Landlab models and how to run them on Hydroshare. This clinic will provide an introduction to Landlab’s features and capabilities, including how to create a model grid, populate it with data, and run numerical algorithms for surface hydrology, hillslope sediment transport, and stream incision. We will illustrate how models can be used for both research and teaching purposes.
}}<br>
{{Keynote-clinics
| name = Katy Barnhart
| affiliation = CU, CIRES
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics3_2018::2) Dakota]]|format=count}}
| title = Model sensitivity analysis and optimization with Dakota and Landlab
| abstract = Dakota is a flexible toolkit with algorithms for parameter optimization, uncertainty quantification, parameter estimation, and sensitivity analysis. In this clinic we will cover the basics of the Dakota framework, work through examples of using Dakota to compare field observations with model output using methods of sensitivity analysis and parameter optimization, and briefly cover the theoretical background of the Dakota methods used. If time permits, we will examine how the choice of comparison metrics influences results. Methods will be presented in the context of the Landlab Earth-surface dynamics framework but are generalizable to other models. Participants who are not familiar with Landlab are encouraged (but not required) to sign up for the Landlab clinic, which will take place before this clinic.<br>Participants do not need to install Landlab or Dakota prior to the clinic but will need to sign up for a Hydroshare account. https://www.hydroshare.org/sign-up/. <br>For those students interested in installing Landlab or Dakota: Installation instructions for Landlab can be found at: http://landlab.github.io (select "Install" from the menu bar at the top of the page). Installation instructions for Dakota can be found at https://dakota.sandia.gov/content/install-dakota.
}}<br>
{{Keynote-clinics
| name = Cam Wobus & Mark Lorie
| affiliation = ABT Associates
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics2_2018::3) Data for natural hazards]]|format=count}}<br>Max attendees: 30. <font color="red">Closed!</font>
| title = Physical and Socio-Economic Data for Natural Hazards
| abstract = In this workshop we will explore publicly available socioeconomic and hydrologic datasets that can be used to inform riverine flood risks under present-day and future climate conditions. We will begin with a summary of different stakeholders’ requirements for understanding flood risk data, through the lens of our experience working with federal, state and local clients and stakeholders. We will then guide participants through the relevant data sources that we use to inform these studies, including FEMA floodplain maps, census data, building inventories, damage functions, and future projections of extreme hydrologic events. We will gather and synthesize some of these data sources, discuss how each data source can be used in impact analyses; and discuss the limitations of each available data source. We will conclude with a brainstorming session to discuss how the scientific community can better produce actionable information for community planners, floodplain managers, and other stakeholders who might face increasing riverine flood risks in the future.
}}<br>
{{Keynote-clinics
| name = Doug Edmonds & Samapriya Roy
| affiliation = Indiana University, Bloomington
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics1_2018::1) Google Earth Engine]]|format=count}}<br>Max attendees: 40. <font color="red">Closed!</font>
| title = An Introduction to using Google Earth Engine
| abstract =  In this clinic we will explore how to use the new cloud-based remote sensing platform from Google. Our hands-on clinic will teach you the basics of loading and visualizing data in Earth Engine, sorting through data, and creating different types of composite images. These techniques are a good starting point for more detailed investigations that monitor changes on earth’s surface.  Prerequisites:<br>1) Bring your own laptop.<br>2) Chrome installed on your system: It will work with Firefox but has issues.<br>3) An active Google account - Register for an account with Google Earth Engine (https://earthengine.google.com/signup/)
}}<br>
{{Keynote-clinics
| name = Ethan Gutmann
| affiliation = NCAR
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics3_2018::1) Downscaling climate models for regional applications]]|format=count}}<br>Max attendees: 30.  <font color="red">Closed!</font>
| title = Making Use of Climate Model Output: Downscaling for Regional Applications
| abstract = Getting usable information out of climate and weather models can be a daunting task. The direct output from the models typically has unacceptable biases on local scales, and as a result a large number of methods have been developed to bias correct or downscale the climate model output. This clinic will describe the range of methods available as well as provide background on the pros and cons of different approaches. This will cover a variety of approaches from relatively simple methods that just rescale the original output, to more sophisticated statistical methods that account for broader weather patterns, to high-resolution atmospheric models. We will focus on methods for which output or code are readily available for end users, and discuss the input data required by different methods.  We will follow this up with a practical session in which participants will be supplied a test dataset and code with which to perform their own downscaling. Participants interested in applying these methods to their own region of interest are encouraged to contact the instructor ahead of time to determine what inputs would be required.
}}<br>
{{Keynote-clinics
| name = Chris Jenkins & Jeff Obelcz
| affiliation = University of Colorado, Boulder & NRL, Stennis
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics3_2018::4) Artificial Intelligence & Machine Learning]]|format=count}}
| title = Forum on Artificial Intelligence & Machine Learning: What lies ahead for Earth Surface Modeling ?
| abstract = The CSDMS 2018 Annual Meeting will include a forum on the subject of Artificial Intelligence (AI) and Machine Learning (ML) as they may affect Earth Surface Dynamics Modeling in the future. The objective is to gauge the interest and existing expertise among the participants of the 2018 ‘Hazards’ meeting, with a view to perhaps forming a working group embedded in CSDMS.<br>AI and ML are already in use in our field, principally for landscape classification and data interpolation. But they are also already heavily established in predictive modelling for the weather, and for biological and socio-economic fields, for example. This forum attempts to look forward and see how these new developments may affect our science and application of that science. The relationship between AI&ML and process modeling is likely to be a special point of discussion.<br>The 2hour forum will include a series of lightning presentations, and printed plus online display materials. It will discuss whether to, and how to create a formal working group on the subject within the CSDMS community, and what the activities should be.
}}<br>
{{Keynote-clinics
| name = Chris Sherwood
| affiliation = USGS
| participants = People attending: {{#ask: [[Category: CSDMS meeting 2018 participants]][[CSDMS_meeting_select_clinics2_2018::1) Structure from Motion (SfM)]]|format=count}}
| title = How to make accurate digital elevation models using imagery from drones
(or even walking around)
| abstract = Modern photogrammetry allows us to make very accurate three-dimensional models using images from consumer-grade cameras. Multiview stereo photogrammetry, also known as structure from motion (SfM) is now easily accessible. Coupled with drones, this is transformative technology that lets us all make better maps than the National Geodetic Survey could not long ago. This hands-on course will demonstrate the basic tools and provide some tips that will allow you to map your favorite field area with 3 - 5 cm horizontal resolution and vertical RMS errors of less than 10 cm. Even better resolution can be obtained for smaller areas, such as outcrops, archaeological digs, or your daughter's art project.<br>We will use Agisoft Photoscan Pro software...please download the free demo (Pro) version before the class. It works equally well on Mac, Windows, and Linux. If you have a choice, chose a machine with an NVidia graphics card. We encourage you to collect a set of images to bring to the class. Guidelines on how best to take images intended for SfM will be send around before the meeting.
}}<br><br>
 
=Participants=
=Participants=
Who is registered as of {{#time: m/d/Y|now}}?
Who is registered as of {{#time: m/d/Y|now}}?
*[[CSDMS_meeting_2018_participant_list|Participants meeting]]
*[[CSDMS_meeting_2019_participant_list|Participants meeting]]
*[[CSDMS_meeting_2018_abstract_list|Submitted abstracts]]
*[[CSDMS_meeting_2019_abstract_list|Submitted abstracts]]
*[[CSDMS_pre-meeting_bootcamp_2018|Participants bootcamp]] May 22<sup>th</sup>
*[[CSDMS_pre-meeting_Software_Carpentry_workshop|Participants Software Carpentry workshop]] May 20<sup>th</sup>
*[[CSDMS_pre-meeting_HPC_workshop_2018|Participants HPC workshop]] May 22<sup>th</sup>
*[[CSDMS_pre-meeting_Quantifying Uncertainty in Earth Systems|Participants Quantifying Uncertainty in Earth Systems workshop]] May 20<sup>th</sup>
*[[CSDMS_post-meeting_hackathon_2018|Participants hackathon]] May 26<sup>th</sup><br><br>
<!--*[[CSDMS_pre-meeting_HPC_workshop_2019|Participants HPC workshop]] May 20<sup>th</sup>-->
 
<br><br>
  </div></div>
  <div class="row"><div class="col-sm-12">
=Reimbursement =
=Reimbursement =
<div class=AutoScaleImage>[[File:Desert-drought-dehydrated-clay-soil-60013.jpeg|350px|right|link=]]</div>
<div class=AutoScaleImage>[[File:Nikolai_Ulltang.jpg|350px|right|link=]]</div>
Within its budget, CSDMS intends to partially support member applicants to attend the annual meeting. Towards this goal, we encourage members to fully or partially cover their expenses if capable. We additionally thank those in the industry and agency fields for understanding that 1) we cannot compensate federal agency participants since our own funding is from NSF, and 2) we request that our industrial/ corporate participants cover their own costs thereby allowing more academic participants to attend.  Because CSDMS is in a bridge year between CSDMS 2.0 and CSDMS 3.0, the funding structure for this meeting is different that previous spring meetings.  Please note the resulting changes to reimbursement and meeting support as detailed below.
Within its budget, CSDMS intends to partially support member applicants to attend the annual meeting. Towards this goal, we encourage members to fully or partially cover their expenses if capable. We additionally thank those in the industry and agency fields for understanding that 1) we cannot compensate federal agency participants since our own funding is from NSF, and 2) we request that our industrial/ corporate participants cover their own costs thereby allowing more academic participants to attend.  


CSDMS is able to provide the following meeting support:
CSDMS is able to provide the following meeting support:<br>
 
''<font color="red">'''NOTICE:'''</font> The maximum number of participants that can be supported for lodging was reached on March 5th, 2019. Feel free to register for the meeting but realize that you are responsible for supporting your own lodging. CSDMS has negotiated a preferred rate for attendees still needing lodging at the Millennium Harvest House Hotel.  You can view and book rooms through this link: [https://res.windsurfercrs.com/ibe/details.aspx?propertyid=13524&nights=1&checkin=05/19/2019&group=1905SURFAC Millennium Preferred Meeting Rates]''
<!--<font color="red">NOTICE: The maximum number that can be supported is reached. Therefore lodging support cannot be offered anymore (March, 24th) . Feel free to register for the meeting but realize that you are responsible for supporting your own lodging.</font>-->
<!--* For up to 75 participants lodging will be provided at the designated meeting hotel (for the evenings of May 20th, 21st and 22nd, shared rooms at 100% of cost and single rooms at 50% of cost, on a first come, first served basis).-->
Participants and Poster Presenters - lodging will be provided at the designated meeting hotel (for the evenings of May 21st, 22nd and 23rd, shared rooms at 100% of cost and single rooms at 50% of cost), breakfast and lunch each day of the meeting and one dinner, shuttle service between meeting hotel and meeting venue. This support is available for registrations received through April 1, 2018 or until 100 registrations have been received.  After the April 1st deadline, lodging reservations and costs will be the responsibility of the participant.
* Breakfast and lunch each day of the meeting and one dinner, shuttle service between the Boulder Marriott/Residence Inn/Millennium Harvest House Hotel and meeting venue will be provided for all registrants.  
<!--Lodging support is available for registrations received through April 1, 2019 or until 75 reservations have been received.  After this, lodging reservations and costs will be the responsibility of the participant.-->


Scholarship recipients, Keynote presenters, Clinic leaders and Awardees - travel support, registration support and lodging as specified in your invitation letter, breakfast and lunch each day of the meeting and one dinner, shuttle service between meeting hotel and meeting venue.
Scholarship recipients, Keynote presenters, Clinic leaders and Awardees - travel support, registration support and lodging as specified in your invitation letter, breakfast and lunch each day of the meeting and one dinner, shuttle service between meeting hotel and meeting venue.


Specific reimbursement procedures will be emailed to qualified attendees along with your final confirmation in early May, 2018.
Specific reimbursement procedures will be emailed to qualified attendees along with your final confirmation early May, 2019.
 
'''Important for foreign travelers:''' If you need a visa to travel to USA, select a business visa.  Please email [mailto:csdms@colorado.edu csdms@colorado.edu]  as soon as possible if you need an invitation letter and indicate any specific wording required. We will need to copy the entry stamp in your passport sometime during the meeting as proof that you were here on business as required by US tax laws (especially when dealing with airfare reimbursements). We are only able to provide reimbursement for airfare within the U.S. and in airlines that are U.S. flag carriers.<br><br>


'''Important for foreign travelers:''' If you need a visa to travel to USA, select a business visa.  Please email [mailto:csdms@colorado.edu CSDMS@Colorado.EDU]  as soon as possible if you need an invitation letter along with your passport number, affiliation and entry/exit dates and indicate any specific wording if required. We will need to copy the entry stamp in your passport sometime during the meeting as proof that you were here on business as required by US tax laws (especially when dealing with airfare reimbursements). <br><br>
  </div></div>
  <div class="row"><div class="col-sm-12">
=Travel, Lodging and Conference Center Information=
=Travel, Lodging and Conference Center Information=
The meeting will be held at [https://seec.colorado.edu/ SEEC]<br>
'''Meeting venue:''' [https://seec.colorado.edu/ SEEC] at the University of Colorado's East Campus in Boulder.<br>
Hotel: [http://www.millenniumhotels.com/usa/millenniumboulder/  Millennium Harvest House Hotel]
'''Hotel:''' The CSDMS supported hotel block will be split between adjacent hotels, the [https://www.marriott.com/hotels/travel/denbo-boulder-marriott/ Boulder Marriott] and the [https://www.marriott.com/hotels/travel/vbocg-residence-inn-boulder/ Residence Inn]. On March 5th the CSDMS-supported rooms were fully booked and therefore, no additional hotel support is available for registrants after that date. CSDMS has negotiated a preferred rate at the [https://res.windsurfercrs.com/ibe/details.aspx?propertyid=13524&nights=1&checkin=05/19/2019&group=1905SURFAC Millennium Harvest House Hotel] for those still needing lodging (Unfortunately, the CSDMS meeting budget does not allow us to provide hotel support or reimbursement for these rooms).<br>
Transportation:
'''Transportation:''' You can book transportation between DIA and Boulder here: [http://greenrideco3.hudsonltd.net/res?USERIDENTRY=CSDMS&LOGON=GO Green Ride Boulder]. And information on how to find [[Media:Counter_location_Verbiage_from_Customs.pdf|Green Ride Boulder at DIA]].<br><br>
You can book transportation between DIA and Boulder here: [http://greenrideco3.hudsonltd.net/res?USERIDENTRY=CSDMS&LOGON=GO Green Ride Boulder]. And information on how to find [[Media:Counter_location_Verbiage_from_Customs.pdf|Green Ride Boulder at DIA]].<br>
A bus between the designated Hotels (Marriott/Residence Inn and Millennium) and the meeting venue will be provided each day (the shuttle is not able to stop at other hotels). We will also provide transportation from the designated Hotel to the banquet (again, the shuttle is not able to stop at other hotels).  Please note that the parking adjacent to the SEEC building requires payment for non-permit holders.  You will need to park in the limited designated areas and provide payment in the adjacent kiosks.<br><br>
We will provide a bus between the designated Hotel and the meeting venue each day (the shuttle is not able to stop at other area hotels). We will also provide transportation from the designated Hotel to the banquet (again, the shuttle is not able to stop at other area hotels).  Please note that the parking adjacent to the SEEC building now requires payment for non-permit holders.  You will need to park in the limited designated areas and provide payment in the adjacent kiosks.<br><br>


=Pre-conference events=
=Pre-conference events=
'''The following will apply to both the Software Carpentry bootcamp and the HPC workshop pre-conference events:'''
''The following will apply to two of the pre-conference events: '''Software Carpentry workshop''', and '''Quantifying Uncertainty in Earth Systems''' :''
* Registration is open until April 2<sup>nd</sup> (or until program fills) and is handled through the 2018 meeting site.<br>
* Registration is open until April 1<sup>st</sup> (or until program fills) and is handled through the 2019 meeting site.<br>
* Each is capped at 30 participants (first paid first serve), and it has a $30 registration fee.
* Each is capped at 30 participants<!--, except for the HPC workshop which is capped at 20 participants--> (all first paid first serve), and it has a $30 registration fee.
* Participant will be responsible for cost / organization of their extra day of hotel accommodation and dinner. Costs will not be reimbursed.
* Participant will be responsible for cost / organization of their extra day of hotel accommodation and dinner. Costs will not be reimbursed.
* We will cover coffee, continental breakfast and lunch during each of the events.<br>
* We will cover coffee, continental breakfast and lunch during each of the events.


==Software Carpentry bootcamp==
==1) Software Carpentry workshop==
<div style="float:right;">[[File:Boots.gif|200px|link=]]</div>CSDMS will host a one-day pre-conference [http://software-carpentry.org/ Software Carpentry bootcamp] on Monday May 21<sup>nd</sup>, 2018, led by Mariela Perignon and Mark Piper. <br>The objective of the bootcamp is to teach basic programming skills that are useful for scientific computing and model development. This is an intensive, hands-on workshop for novice programmers and those with minimal experience in the specific topics covered. Instructors will cover basic elements of:
CSDMS will host a one-day pre-conference Software Carpentry workshop on Monday, May 20, 2019. The goal of the workshop is to teach basic programming skills that will be useful for scientific research and model development. This is an intensive, hands-on workshop, during which certified instructors will cover basic elements of:
# the Unix bash shell,
* the Unix bash shell,
# Python programming with Numpy, and
* Python programming, and
# Github for version control.
* Github for version control.
Our instructors are earth scientists and have familiarity with the CSDMS framework. Lessons and examples will be targeted toward relevant problems in the geosciences. The bootcamp intentionally precedes the CSDMS meeting, so the skills participants develop should be useful in the clinics during the meeting.<br><br>
The instructors, Mariela Perignon and Mark Piper, are earth scientists, so lessons and examples will be targeted toward relevant problems in your field. The workshop intentionally precedes the CSDMS Annual Meeting so that the skills you develop can be used in the clinics during the meeting.
<br><br>


==HPC workshop==
==2) Quantifying Uncertainty in Earth Systems==
CSDMS will host a one-day pre-conference HPC workshop '''Essentials for HPCC model code''' on Monday May 21<sup>nd</sup>, 2018, led by Thomas Hauser and his HPC Research Computing team. <br>The objective of the workshop is to teach all essential programming skills to optimal use a HPCC. This will be an hands-on workshop.<br><br>
This one-day pre-conference workshop provided by Professor Jef Caers, Stanford University on Monday, May 20, 2019 will cover the quantification of uncertainty in Earth Systems using a protocol termed Bayesian Evidential Learning. The course will walk through the steps of this protocol consisting of prior model specification, monte Carlo & model falsification, global sensitivity analysis, Mont-Carlo based inverse modeling and posterior model falsification.


=Post-conference BMI Hackathon=
The workshop will focus on the high-level principles and understanding, and on actual practical examples rather than the technical or theoretical details. There will be no software exercises on-site, but such resources will be made available during the workshop with some demos using Jupyter notebooks.
<div style="float:right;">[[File:bmi-lego-left-facing.png|200px|link=]]</div>CSDMS will host a one-day post-conference hackathon on Friday May 25<sup>th</sup>, 2018, organized by Eric Hutton and Mark Piper.<br><br>A hackathon is loosely defined as a social gathering with the goal of collaboratively creating usable software. Here, we’ll hack BMIs. A BMI-ed model can be converted into a CSDMS component, which allows it to be called from PyMT and included in WMT, thereby increasing its visibility and use.
Each attendee is invited to bring a model of their choice<sup>1</sup> to wrap with a BMI. The model can be in any CSDMS-supported language (C, C++, Fortran, Java, Python). Attendees should be proficient in the language of their chosen model. The attendees will work together to add BMIs to models. CSDMS staff will guide participants and provide technical assistance. The ultimate goal of the hackathon is to get each participant's model wrapped with a BMI. This is a lofty goal. The more likely outcome is that each participant will have a good start on getting their model wrapped.<br><br>
Before the hackathon, attendees are expected to have read:
* [[BMI_Description|BMI description]]
* BMI specification (http://bmi-spec.readthedocs.io)
* BMI documentation (http://bmi-python.readthedocs.io)
and to have attended a BMI clinic in the current or in an earlier year. Attendees need a laptop with either a working compiler for the language of their choice or an account on beach​. To make the most of the hackathon, attendees should attempt to prepare their model for a BMI by refactoring it into initialize (sets the initial state of the model), update (advances the model by one time step), and finalize (shuts down the model) subprograms.<br><br>
<sup>1</sup> ''If an attendee doesn’t have a model to wrap, but does express a language preference, we will provide them with a simple model in their language that they can wrap; however, attendees who bring their own model will have precedence if space is an issue.''


'''Note:'''
The application will focus on subsurface systems as an example of Earth systems, in particular, I  will cover application in groundwater hydrology as well as shallow and deep geothermal energy as specific examples.
* Registration is open until April 2<sup>st</sup> (or until the program fills) and is handled through the 2018 meeting site.<br>
* The hackathon is capped at 12 participants (first paid first served), and it has a $30 registration fee.
* Participants will be responsible for cost / organization of their extra day of hotel accommodation and dinner. Costs will not be reimbursed.
* We will cover coffee, continental breakfast and lunch during the hackathon.<br><br>


=Syvitski Student Modeler Award 2018=
Prerequisites: participant will need to have taken a basic course in statistics and probability theory, know about Bayes Rule, probability distributions, expectation, conditional probability and the basics of statistical calculations and exploratory data analysis.
<div style="float:right;">[[File:Julio.jpg|150px|link=|Julio]]<br>''Julio Hoffimann Mendes''</div>We are pleased to announce that Julio Hoffimann Mendes of Stanford University has won the Syvitski Student Modeler Award of 2018, with his work on Stochastic simulation by image quilting of process-based geological models. Julio will present his work during the Geoprocesses, Geohazards – CSDMS 2018 meeting.
 
Reference: '''''[https://agupubs.onlinelibrary.wiley.com/doi/book/10.1002/9781119325888 Quantifying Uncertainty in Subsurface Systems]''''', Scheidt, C., Li, L. & Caers, J., 2018, Wiley-AGU Monograph.
 
Questions?:  jcaers@stanford.edu
<br><br>
<br><br>


=Student Scholarships=
<!--
==3) HPC workshop==
CSDMS will host a one-day pre-conference HPC workshop '''Essentials for HPCC model code''' on Monday May 20<sup>nd</sup>, 2019, led by Thomas Hauser, Director of Research Computing, University of Colorado, Boulder and his HPC Research Computing team. <br><br>
The objective of the workshop is to teach all essential programming skills for optimal use of an HPCC. This will be an hands-on workshop covering the basics of parallelism, optimizing for current CPUs, parallelizing your code with OpenMP, introductions to MPI and other related HPC topics and techniques.<br><br>-->
<!--
=Syvitski Student Modeler Award 2019=
<div style="float:right;">[[File:Julio.jpg|150px|link=|Julio]]<br>''Julio Hoffimann Mendes''</div>We are pleased to announce that Julio Hoffimann Mendes of Stanford University has won the Syvitski Student Modeler Award of 2019, with his work on Stochastic simulation by image quilting of process-based geological models. Julio will present his work during the CSDMS 3.0: Bridging boundaries 2019 meeting.<br><br>-->
  </div></div>
  <div class="row"><div class="col-sm-12">
=Student Scholarships and travel awards=
==CSDMS Scholarships==
<!--:The CSDMS scholarship is now closed.<br><br>-->
<!--:The CSDMS scholarship is now closed.<br><br>-->
This year CSDMS is offering a limited number of scholarships (up to 5) for graduate students to attend the CSDMS annual meeting. These scholarships will be offered for the purpose of increasing participation of underrepresented students or those that have not previously attended. To be eligible, graduate students need to meet the following requirements:
This year CSDMS is offering a limited number of scholarships (up to 7) for graduate students to attend the CSDMS annual meeting. These scholarships will be offered for the purpose of increasing participation of underrepresented students or those that have not previously attended a CSDMS Annual Meeting. To be eligible, graduate students need to meet the following requirements:
* Attend the whole meeting (May 22-24, 2018)
* Attend the whole meeting (May 21-23, 2019)
* Submit an abstract
* Submit an abstract
* Be enrolled as a graduate student at the time of the meeting (bring proof)
* Be enrolled as a graduate student at the time of the meeting (bring proof)
* Submit a letter of motivation that states why you wish to participate in the meeting, and explain how your participation would enhance diversity in the field of natural hazards and surface dynamics modeling. Be sure to mention if it is your first time attending.
* Submit a letter of motivation that states why you wish to participate in the meeting, and explain how your participation would enhance diversity in the field of natural hazards and surface dynamics modeling. Be sure to mention if it is your first time attending.
Send your application materials to [mailto:csdms@colorado.edu csdms@colorado.edu] by '''February 19<sup>th</sup>, 2018'''. The CSDMS scholarships will cover:  
Send your application materials to [mailto:csdms@colorado.edu csdms@colorado.edu] by '''February 8<sup>th</sup>, 2019'''. The CSDMS scholarships will cover:  
* Registration costs (you will still need to pay the registration fee, but will be reimbursed after attending the meeting)
* Registration costs (you will still need to pay the registration fee, but will be reimbursed after attending the meeting)
* Hotel accommodations for three nights, starting May 21<sup>nd</sup>. (as outlined in Travel/Lodging section above - 100% paid if you agree to a roommate)
* Hotel accommodations for three nights, May 20, 21 and 22<sup>st</sup>. (as outlined in Travel/Lodging section above - 100% paid if you agree to a roommate)
* Travel (air fare ''ONLY'' within the United States and local shuttle transport)
* Travel (air fare ''ONLY'' within the United States and local shuttle transport)
* Per diem to help reimburse the cost of meals from 22-24 May 2018 not offered in the conference schedule
* Per diem to help reimburse the cost of meals from 21-23 May 2019 not offered in the conference schedule
''All applicants will receive confirmation of their submission.  Please notify us at [mailto:csdms@colorado.edu csdms@colorado.edu] if you do not receive confirmation within 24 hours of submission.''<br><br>
''All applicants will receive confirmation of their submission.  Please notify us at [mailto:csdms@colorado.edu csdms@colorado.edu] if you do not receive confirmation within 24 hours of submission.''<br><br>


== LAND Travel Awards==
<div style="float:right;">[[File:LANDtravel-award-banner.jpg|250px|link=]]</div>
The journal '''LAND''' is inviting applications for two Travel Awards for postdoctoral fellows and PhD students in the area of land systems science to attend the CSDMS annual meeting. The nominations and applications will be assessed by an Evaluation Committee chaired by the Editor-in-Chief of Land: Prof. Andrew Millington.<br>
'''Candidates’ Requirements:'''
* Applicants must be postdoctoral fellows or PhD students involved in land systems science;
* Applicants will attend an international conference in 2019 to present their research (oral presentation or poster).
'''Applicants need to submit the following documents:'''
* An abstract of your work (500 words);
* A short CV with complete list of publications;
* The conference you plan to attend and the oral or poster abstract that will be presented;
* A letter of recommendation from a supervisor or PI (Principal Investigator). The supervisor or PI should sign and confirm that the applicant fulfills requirements.
The Award will consist of 800 (Swiss Francs) each. Please send the applications here (http://www.mdpi.com/journal/land/awards) by '''15 January 2019'''. The winner will be announced in Land by 1 March 2019.
<br><br>
  </div></div>
  <div class="row"><div class="col-sm-12">
=Important dates=
=Important dates=
<font color="gray">
<font color="gray">
* '''January 14<sup>th</sup>''': Registration opens
* '''January 14<sup>th</sup>''': [[Student_Modeler_Award_2019|Deadline for student modeler competition submission]]
* '''January 15<sup>th</sup>''': [[Student_Modeler_Award_2018|Deadline for student modeler competition submission]]
* '''January 14<sup>th</sup>''': Registration opens and early registration fees ($200) apply till April 1<sup>st</sup>
* '''January 31<sup>st</sup>''': Student modeler competition results announced
* '''January 15<sup>th</sup>''': Deadline LAND travel awards
* '''February 19<sup>th</sup>''': Deadline for student scholarship applications '''CSDMS'''
* '''February 1<sup>st</sup>''': Student modeler competition results announced
* '''February 26<sup>th</sup>''': Scholarship awardees notified
* '''February 8<sup>th</sup>''': Deadline for student scholarship applications '''CSDMS'''
* '''April 1<sup>st</sup>''': Deadline abstract submission, discounted early registration and meeting supported hotel reservations (unless our cap of 100 lodgers has already been met).  After this deadline, reservations and accommodation costs will be responsibility of participant.</font>
* '''February 28<sup>th</sup>''': Scholarship awardees notified
<!-- * '''April 1<sup>st</sup>''': Deadline for meeting supported hotel reservations. After this deadline, reservations and accommodation costs will be responsibility of participant. --><font color="gray">
* '''April 1<sup>st</sup>''': Deadline: a) abstract submission, b) discounted early registration ($200), and c) meeting supported hotel reservations (unless our cap of 75 lodgers has already been met).  After this deadline, reservations and accommodation costs will be responsibility of participant. Regular registration fee ($400) April 2 to May 1.
* '''May 14<sup>th</sup>''': Deadline regular registration. ''Notice additional costs do apply.''</font>
* '''May 9<sup>th</sup>''': Deadline registration
* '''May 21<sup>nd</sup>''': <font color="red">Optional</font>: pre-conference bootcamp or HPC workshop
* '''May 20<sup>th</sup>''': CSDMS 1day pre conference workshops
* '''May 22-24<sup>th</sup>''': CSDMS annual meeting
* '''May 21-23<sup>rd</sup>''': CSDMS annual meeting
* '''May 25<sup>th</sup>''': <font color="red">Optional</font>: post-conference hackathon
* '''May 24<sup>th</sup>''': CSDMS Executive and Steering committees meetings (''by invitation only'')<br><br></font>
* '''May 25<sup>th</sup>''': CSDMS Executive and Steering committees meetings (''by invitation only'')<br><br>
  </div></div>
 
<div class="row"><div class="col-sm-1"></div><div class="col-sm-5"><br><div class=AutoScaleImage>[[image:CSDMS-logo-color-tagline-hor_high.png|440px|link=]]</div></div><div class="col-sm-5"> <div class=AutoScaleImage>[[Image:Large_CUAHSI_logo.jpg|380px|ling=]]</div></div><div class="col-sm-1"></div></div>


<div class="container" style="width:99.5%; valign:bottom;">
  <div class="row" style="valign:bottom;">
    <div class="col-sm-4" style="valign:bottom;"><center><br><div class=AutoScaleImage>[[image:CSDMS_high_res_weblogo.jpg|440px|link=]]</div><br></center></div>
    <div class="col-sm-4" style="valign:bottom;"><br></div>
    <div class="col-sm-4" style="valign:bottom;"><center><div class=AutoScaleImage>[[image:Sen-logo.png|132px|link=http://www.sedexp.net]]</div><br></center> </div>
  </div>
</div>


</noinclude><includeonly>
</noinclude><includeonly>
{{{info|page name=2018 CSDMS meeting-<unique number;start=001>}}}
{{{info|page name=2019 CSDMS meeting-<unique number;start=001>}}}
<div id="wikiPreview" style="display: none; padding-bottom: 25px; margin-bottom: 25px; border-bottom: 1px solid #AAAAAA;"></div>
<div id="wikiPreview" style="display: none; padding-bottom: 25px; margin-bottom: 25px; border-bottom: 1px solid #AAAAAA;"></div>
<center><big>'''Geoprocesses, geohazards - CSDMS 2018'''</big></center><br><br>
<center><big>'''CSDMS 3.0: Bridging Boundaries'''</big></center><br><br>


{|style="width:900px;"
{|style="width:900px;"
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|
|-
|-
|Please direct all inquiries to Lynn McCready: [mailto:csdms@colorado.edu csdms@colorado.edu] with subject title: "CSDMS Meeting 2018"
|Please direct all inquiries to Lynn McCready: [mailto:csdms@colorado.edu csdms@colorado.edu] with subject title: "CSDMS Meeting 2019"
|}<br><br>
|}<br><br>
__NOTOC__
__NOTOC__
{{CSDMS_meeting_personal_information}}  
{{CSDMS_meeting_personal_information}}  
{{{for template|CSDMS meeting personal information template-2018}}}
{{{for template|CSDMS meeting personal information template-2019}}}
{| class="formtable"
{| class="formtable"
| valign=top style="width:300px;"|First name:
| valign=top style="width:300px;"|First name:
| valign=top | {{{field|CSDMS meeting first name|mandatory|cols=27|rows=1}}}
| valign=top | {{{field|CSDMS meeting first name|mandatory|input type=textarea|cols=27|rows=1}}}
|-
|-
| valign=top style="width:300px;"|Last name:
| valign=top style="width:300px;"|Last name:
| valign=top | {{{field|CSDMS meeting last name|mandatory|cols=27|rows=1}}}
| valign=top | {{{field|CSDMS meeting last name|mandatory|input type=textarea|cols=27|rows=1}}}
|-
|-
| valign=top |Organization:
| valign=top |Organization:
| valign=top | {{{field|CSDMS meeting institute|mandatory|cols=27|rows=1}}}
| valign=top | {{{field|CSDMS meeting institute|mandatory|input type=textarea|cols=27|rows=1}}}
|-
|-
| valign=top |Town / City:
| valign=top |Town / City:
| valign=top | {{{field|CSDMS meeting city|mandatory|cols=27|rows=1}}}
| valign=top | {{{field|CSDMS meeting city|mandatory|input type=textarea|cols=27|rows=1}}}
|-
|-
| valign=top | Country:
| valign=top | Country:
Line 456: Line 284:
{|
{|
| valign=top style="width:300px;" |Email address:
| valign=top style="width:300px;" |Email address:
| valign=top | {{{field|CSDMS meeting email address|mandatory|cols=27|rows=1}}}
| valign=top | {{{field|CSDMS meeting email address|mandatory|input type=textarea|cols=27|rows=1}}}
|-
|-
| valign=top | Phone:
| valign=top | Phone:
| valign=top | {{{field|CSDMS meeting phone|cols=27|rows=1}}}
| valign=top | {{{field|CSDMS meeting phone|input type=textarea|cols=27|rows=1}}}
|-
|-
| valign=top colspan="2"| <br><font color="gray">''Please change your [https://csdms.colorado.edu/wiki/User:{{CURRENTUSER}} user profile] if you moved recently''.</font>
| valign=top colspan="2"| <br><font color="gray">''Please change your [https://csdms.colorado.edu/wiki/User:{{CURRENTUSER}} user profile] if you moved recently''.</font>
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{{CSDMS_meeting_scholar_pre-meeting}}
{{CSDMS_meeting_scholar_pre-meeting}}
{{{for template|CSDMS_meeting_scholar_and_pre-meeting}}}
{{{for template|CSDMS_meeting_scholar_and_pre-meeting2019}}}
{| class="formtable"
{| class="formtable"
| valign=top style="width:300px;"|Which pre-conference meeting would you like to join?:
| valign=top style="width:300px;"|Which pre-conference meeting would you like to join?:
| valign=top | {{{field|CSDMS meeting pre-conference|mandatory|input type=radiobutton|default=None|show on select=Bootcamp=>pre_conference_yes;HPC workshop=>pre_conference_yes}}}
| valign=top | {{{field|CSDMS meeting pre-conference2019|mandatory|input type=radiobutton|default=None|show on select=Carpentry=>pre_conference_yes;HPC=>pre_conference_yes;Uncertainty=>pre_conference_yes}}}
|-
|-
| valign=top style="width:300px;"|Would you like to join the post-conference meeting?:
| valign=top | {{{field|CSDMS meeting post-conference|mandatory|input type=radiobutton|default=No|show on select=Yes=>post_conference_yes;No=>post_conference_no}}}
|}
|}
<div id="pre_conference_yes">
<div id="pre_conference_yes">
'''Note''': ''Pre-Conference is an one day event, May 21<sup>th</sup> and will '''cost an additional $30'''. No reimbursements will be provided nor for the extra night hotel or dinner.''
'''Note''': ''Pre-Conference is an one day event, May 20-<sup>th</sup> and will '''cost an additional $30'''. No reimbursements will be provided nor for the extra night hotel or dinner.''
</div>
<div id="post_conference_yes">
'''Note''': ''Post-Conference hackaton is an one day event, May 25<sup>th</sup> and will '''cost an additional $30'''. No reimbursements will be provided nor for the extra night hotel or dinner.''
</div>
</div>
{{{end template}}}
{{{end template}}}


{{CSDMS_meeting_clinics}}
{{CSDMS_meeting_clinics}}
{{{for template|CSDMS meeting select clinics1 2018}}}
{{{for template|CSDMS meeting select clinics1 2019}}}
{| class="formtable"
{| class="formtable"
| valign=top colspan="2"| <br><font color="gray">''Help us schedule the meeting! Select for each day the clinic you would like to attend:''<br>''(See [https://csdms.colorado.edu/wiki/Form:Annualmeeting2018#Clinic_Leaders clinic leaders] for more information)''</font><br><br>
| valign=top colspan="2"| <br><font color="gray">''Help us schedule the meeting! Select for each day the clinic you would like to attend:''<br>''(See [https://csdms.colorado.edu/wiki/Form:Annualmeeting2019#Clinic_Leaders] for more information)''</font><br><br>
|-
|-
| valign=top style="width:300px;"|Select <b>one clinic</b> for the 1<sup>st</sup> day<br>(<i>Parallel sessions</i>):
| valign=top style="width:300px;"|Select <b>one clinic</b> for the 1<sup>st</sup> day<br>(<i>Parallel sessions</i>):
| valign=top |{{{field|CSDMS_meeting_select_clinics1_2018|mandatory|input type=dropbox|default = 2) BMI Live!|show on select=1) Google Earth Engine=>GEE_no; 3) LISFlood=>LISF_no; 4) Sediment Experimentalist Network=>SEN_no}}}
| valign=top |{{{field|CSDMS_meeting_select_clinics1_2019|mandatory|input type=dropbox|default = 3) Pangeo - Scalable Geoscience Tools Python|show on select=1) Morphological Modeling - Delft3D Flex Mesh=>Delft3D_no}}}
|}
|}
<div id="GEE_no">
<div id="Delft3D_no">
<font color="red">'''Note''': ''As of February 12<sup>th</sup>, the Google Earth Engine clinic is full.<br>If you selected this clinic before February 12<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
<font color="red">'''Note''': ''As of February 26<sup>th</sup>, the "Morphological Modeling - Delft3D Flex Mesh" clinic is full.<br>If you selected this clinic before February 26<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
</div>
<div id="LISF_no">
<font color="red">'''Note''': ''As of March 2<sup>th</sup>, the LISFlood clinic is full.<br>If you selected this clinic before March 2<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
</div>
<div id="SEN_no">
<font color="red">'''Note''': ''As of April 4<sup>th</sup>, the SEN clinic is full.<br>If you selected this clinic before April 4<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
</div>
</div>


{{{end template}}}
{{{end template}}}
{{{for template|CSDMS meeting select clinics2 2018}}}
{{{for template|CSDMS meeting select clinics2 2019}}}
{| class="formtable"
{| class="formtable"
| valign=top style="width:300px;"|Select <b>one clinic</b> for the 2<sup>nd</sup> day<br>(<i>Parallel sessions</i>):
| valign=top style="width:300px;"|Select <b>one clinic</b> for the 2<sup>nd</sup> day<br>(<i>Parallel sessions</i>):
| valign=top |{{{field|CSDMS_meeting_select_clinics2_2018|mandatory|input type=dropbox|default=1) Structure from Motion (SfM)|show on select=3) Data for natural hazards=>NatHazDat_no}}}
| valign=top |{{{field|CSDMS_meeting_select_clinics2_2019|mandatory|input type=dropbox|default=2) Hydroshare - Data|show on select=1) PyMT - The CSDMS Python Modeling tool=>pymt_no}}}
|}
|}
<div id="NatHazDat_no">
<div id="pymt_no">
<font color="red">'''Note''': ''As of March 15<sup>th</sup>, the ''Data for natural hazards'' clinic is full.<br>If you selected this clinic before March 15<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
<font color="red">'''Note''': ''As of February 18<sup>th</sup>, the ''1) PyMT - The CSDMS Python Modeling tool'' clinic is full.<br>If you selected this clinic before February 15<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
</div>
</div>
{{{end template}}}
{{{end template}}}
{{{for template|CSDMS meeting select clinics3 2018}}}
{{{for template|CSDMS meeting select clinics3 2019}}}
{| class="formtable"
{| class="formtable"
| valign=top style="width:300px;"|Select <b>one clinic</b> for the 3<sup>rd</sup> day<br>(<i>Parallel sessions</i>)
| valign=top style="width:300px;"|Select <b>one clinic</b> for the 3<sup>rd</sup> day<br>(<i>Parallel sessions</i>)
| valign=top |{{{field|CSDMS_meeting_select_clinics3_2018|mandatory|input type=dropbox|default=2) Dakota|show on select=1) Downscaling climate models for regional applications=>Downscaling_no}}}
| valign=top |{{{field|CSDMS_meeting_select_clinics3_2019|mandatory|input type=dropbox|default=1) CUDA-enabled DES3D|show on select=2) Deep Neural Networks Classification=>Neural_no}}}
|}
|}
<div id="Downscaling_no">
<div id="Neural_no">
<font color="red">'''Note''': ''As of March 5<sup>th</sup>, the ''Downscaling climate models for regional applications'' clinic is full.<br>If you selected this clinic before March 5<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
<font color="red">'''Note''': ''As of March 15<sup>th</sup>, the ''2) Deep Neural Networks Classification'' clinic is full.<br>If you selected this clinic before March 15<sup>th</sup>, you can attend, otherwise please select another clinic''</font>
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'''Note''':''Submissions for scholarships are now closed. If you applied earlier for a scholarship, we'll reach out to you soon'' <!--'''Note''': ''This is only an indication that you would like to apply for the CSDMS offered student scholarships. See the meeting site to actually apply for the [https://csdms.colorado.edu/wiki/Form:Annualmeeting2019#Student_Scholarships_and_travel_awards Student scholarships].''-->
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|valign=top width="500" style="padding-left: 75px;"|<div id="submit_abstract_no">'''''You have till April 1<sup>st</sup> to change your mind and submit an abstract. No poster space will be reserved for you for now. '''''</div>
|valign=top width="500" style="padding-left: 75px;"|<div id="submit_abstract_no">'''''You have till April 1<sup>st</sup> to change your mind and submit a poster abstract. No poster space will be reserved for you for now. '''''</div>
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Latest revision as of 10:48, 30 September 2019

Redirect to:

CSDMS 3.0 - Bridging Boundaries



Agenda

Click here to view the final agenda.

Registration

Registration is closed. See you all soon!

Introduction

The meeting will bring together experts in earth surface process modeling in a three-day hands-on workshop to identify challenges in bridging boundaries in our current process understanding, both fundamentally in the earth surface processes as well as in the modeling approaches and technology. This includes interdisciplinary boundaries and how best to identify and address these numerically.
The CSDMS3.0 - Bridging Boundaries 2019 Annual Meeting aims to:

  1. Identify new frontiers in fundamental process understanding of the earth surface. New algorithms, cyberinfrastructure development and new model couplings appear paramount to explore important process dynamics and linkages.
  2. Identify critical missing components in our ability to overcome model and process boundaries.
  3. Build researcher-to-researcher connections. Better connect earth surface process modelers with modelers of primary and secondary forcings, as well as social sciences and engineers to allow exploration of the human dimensions in earth surface processes.

As in past meetings, keynote speakers are by invitation only, and poster presentations are the general media. The meeting will include:

  • State-of-the art keynote presentations in earth-surface dynamics
  • Hands-on clinics related to community models, tools and approaches
  • Transformative software products and approaches designed to be accessible, easy to use, and relevant
  • Breakout sessions
  • Poster Sessions
  • Consider signing up for the pre-conference training sessions as well. See below for more information on these.


Poster Information: The poster boards are configured for 4' wide by 6' tall (portrait orientation) posters.


Keynote Speakers

Follow the water: Post-glacial landscape evolution in the Central Lowlands
University of Illinois at Urbana-Champaign
United States
Repeated continental glaciation of the US Central Lowlands disrupted pre-Pleistocene fluvial drainage networks by filling valleys, rerouting major rivers, and incising oversize meltwater channels. Post-glacial landscapes are characterized by large fractions of non contributing area (NCA) which does not contribute flow to external drainage networks by steepest decent algorithms. Analysis of land surfaces most recently glaciated between 130,000 and 10,000 years ago suggests that NCA is lost over time as fluvial networks are reestablished. Low surface slopes combined with significant fractions of NCA make such fluvial network growth difficult to reconcile with standard treatments of flow routing. We develop modules in Land Lab that allow for connection of NCA via filling and spilling from closed depressions on the surface and through groundwater flow across subtle surface water divides to explore the impacts of these mechanisms of flow accumulation on the pace of evolution and morphology of resulting river networks. This work highlights the more general need to consider the relationship, or lack of relationship, between topography and river discharge.
JOSS: Journal of Open Source Software
University of Colorado, Boulder
United States
JOSS is a developer friendly, peer reviewed academic journal for research software packages, providing a path to academic credit for scholarship disseminated via software. I'll give a tour of the journal, its submission/review process, and opportunities to get involved.
How extensional tectonics and surface processes interact to shape continental plate boundaries
Geological Survey of Norway
Norway
Seismic observations document how substantial amounts of sediments may be transported from the onshore to the offshore during formation of extensional continental margins. Thick sedimentary packages are, for example, found on the margins of Norway, the eastern US coast, and the Gulf of Mexico. In contrast, the Goban Spur, Galicia Bank, and the Red Sea are examples of sediment-starved margins. Such variations in the amount of sediments impact not only the development of offshore sedimentary basins, but the changes in mass balance by erosion and sedimentation can also interact with extensional tectonic processes. In convergent settings, such feedback relationships between erosion and tectonic deformation have long been highlighted: Erosion reduces the elevation and width of mountain belts and in turn tectonic activity and exhumation are focused at regions of enhanced erosion. But what is the role played by surface processes during formation of extensional continental margins? In this lecture, I will discuss geodynamic experiments that explore the response of continental rifts to erosion and sedimentation from initial rifting to continental break-up. These experiments show how the interaction of extensional tectonics and surface processes can fundamentally alter the width and topography of continent-ocean boundaries.
2019 Diversity Panel
Boise State University
United States
This is a diversity panel discussion at the CSDMS 2019 annual meeting
Machine Learning and Coastal Morphodynamics
University of North Carolina at Greensboro
United States
Numerical modeling is at the core of prediction in coastal settings. Observational data is used in tandem with models for a variety of modeling tasks, but the perhaps the coupling could be tighter? I will discuss a range of Machine Learning tools that co-workers and I have integrated with coastal morphodynamic models that allow for a tight coupling of models and data, and provide morphodynamic insight.
The National Hydrologic Model: coordinated, comprehensive, and consistent hydrologic modeling at multiple scales for the conterminous United States
USGS
United States
The National Hydrologic Model (NHM) was developed to support coordinated, comprehensive, and consistent hydrologic modeling at multiple scales for the conterminous United States. The NHM development has been driven for the past decade by specific applications to meet stakeholder needs for accessible, adaptable surface water models that address local hydrologic modeling needs. NHM-based applications provide information to scientists, water resource managers, and the public to support advanced scientific inquiry and effective decision-making. The NHM infrastructure supports the execution of the Monthly Water Balance Model (NHM-MWBM) and the daily Precipitation Runoff Modeling System (NHM-PRMS). The NHM-PRMS balances all components of the water budget and can include simulation of stream temperature. Complete local models can be subset from the NHM-PRMS, then adapted and applied with local expertise to address stakeholder needs, providing nationally-consistent, locally informed, stakeholder relevant results. The NHM represents an opportunity for collaboration in the hydrologic community.
The CSDMS Python Modeling Tool (PyMT)
University of Colorado, Boulder/CSDMS IF
United States
CSDMS’s newly released Python Modeling Tool (PyMT) is an open source python package that provides convenient tools for coupling of models that use the Basic Model Interface. Historically, earth-surface process models have often been complex and difficult to work with. To help improve this situation and make the discovery process more efficient, the CSDMS Python Modeling Tool (PyMT) provides an environment in which community-built numerical models and tools can be initialized and run directly from a Python command line or Jupyter notebook. To illustrate how PyMT works and the advantages it provides, we will present a demonstration of two coupled models. By simplifying the process of learning, operating, and coupling models, PyMT frees researchers to focus on exploring ideas, testing hypotheses, and comparing models with data.
The Machine Learning Landscape
University of Colorado
United States
Panel discussion on AI/ML
Modeled Postglacial Landscape Evolution at the Southern Margin of the Laurentide Ice Sheet: Hydrological Connection of Uplands Controls the Pace and Style of Fluvial Network Expansion
University of Illinois at Urbana-Champaign
United States
Landscapes of the US Central Lowland were repeatedly affected by the Laurentide Ice Sheet. Glacial processes diminished relief and disrupted drainage networks. Deep valleys carved by glacial meltwater were disconnected from the surrounding uplands. The upland area lacking surface water connection to the drainage network is referred to as non-contributing area (NCA). Decreasing fractions of NCA on older surfaces suggests that NCA becomes drained over time. We propose that the integration could occur via: 1) capture of NCA as channels propagate into the upland or, 2) subsurface or intermittent surface connection of NCA to external drainage networks providing increased discharge to promote channel incision. We refer the two cases as “disconnected” and “connected” since the crucial difference between them is the hydrological connection of the upland to external drainage. We investigate the differences in evolution and morphology of channel networks in low relief landscapes under disconnected and connected regimes using the LandLab landscape evolution modeling platform. We observe substantially faster rates of erosion and integration of the channel network in the connected case. The connected case also creates longer, more sinuous channels than the disconnected case. Sensitivity tests indicate that hillslope diffusivity has little influence on the evolution and morphology. The fluvial erosion coefficient has significant impact on the rate of evolution, and it influences the morphology to a lesser extent. Our results and a qualitative comparison with landscapes of the glaciated US Central Lowland suggest that connection of NCAs is a potential control on the evolution and morphology of post-glacial landscapes.
Modeling the degradation of ice-rich permafrost landscapes
Alfred Wegener Institute for Polar and Marine Research
Germany
Thawing of permafrost potentially affects the global climate system through the mobilization of greenhouse gases, and poses a risk to human infrastructure in the Arctic. The response of ice-rich permafrost landscapes to a changing climate is particularly uncertain, and challenging to be addressed with numerical models. A main reason for this is the rapidly changing surface topography resulting from melting of ground ice, which is referred to as thermokarst. It is expressed in characteristic landforms which alter the hydrology, the surface energy balance, and the redistribution of snow of the entire landscapes. Polygonal patterned tundra which is underlain by massive ice-wedges, is a prototype of a sensitive permafrost system which is increasingly subjected to thermokarst activity throughout the Arctic.

In this talk I will present a scalable modeling approach, based on the CryoGrid land surface model, to investigate the degradation of ice-wedges. The numerical model takes into account lateral fluxes of heat, water, and snow between different topographic units of polygonal tundra and simulates topographic changes resulting from melting of excess ground ice (i.e., thermokarst), and from lateral erosion of sediment. We applied the model to investigate the influence of hydrological conditions on the development of different types of ice-wedge polygons in a study area in northern Siberia. We further used projections of future climatic conditions to confine the evolution of ice-wedge polygons in a changing climate, and assessed the amount of organic matter which could thaw under different scenarios. In a related study for a study site in northern Alaska, we demonstrated that the model setup can be used to study the effect of infrastructure on the degradation of ice-wedges.

Altogether, our modeling approach can be seen as a blueprint to investigate complexly inter-related processes in ice-rich permafrost landscapes, and marks a step forward towards an improved representation of these landscapes in large-scale land surface models.
Understanding and Improving the Performance of Scientific Software and its Humans
University of Oregon
United States
Understanding the performance of scientific applications can be a challenging endeavor given the constant evolution of architectures, programming models, compilers, numerical methods and the applications themselves. Performance integration testing is still not a reality for the majority of high-performance applications because of the complexity, computational cost, and lack of reliable automation. Hence, as part of the DOE SciDAC program, we are working on creating robust performance analysis workflows that capture application-specific performance issues and can be maintained and extended by the application scientists without requiring an external performance “expert”. The consumers of performance data include application developers, performance models, and autotuners. Once appropriate and sufficient performance data is available, our approach to using it to guide optimization is three-fold: (i) we investigate the most effective way to present performance results to the code developers (ii) we automate the selection of numerical methods based on generic performance models (as part of the NSF-funded Lighthouse project) and (iii) we explore the use of different types of performance models in low-level autotuning systems to reduce the size of the parameter search space. While code generation and autotuning are important for achieving performance portability, the majority of code development (including optimization) is still performed by humans. As part of the DOE IDEAS project, we are developing data-based methodologies to try to understand better how human teams work most effectively in developing high-quality, high-performance, enduring scientific software.
Exploring delta morphodynamics using the CSDMS BMI to couple fluvial and coastal processes
ORISE Postdoctoral Fellow, US EPA
United States
Using the CSDMS tools and resources, we have developed a new model coupling river, floodplain, and coastal processes to explore how interactions between upstream and downstream controls in a fluvio-deltaic system affect river channel processes and large-scale delta morphology. The River Avulsion and Floodplain Evolution Model (RAFEM, written in Python) and Coastline Evolution Model (CEM, written in C) are coupled using the CSDMS Basic Model Interface (BMI) and are available as part of the CSDMS software stack. Using the CSDMS High Performance Computing Cluster and the Dakota toolkit, we have explored how the wave climate (wave heights and offshore approach angles), sea-level rise rate, and the amount of in-channel aggradation required to trigger an avulsion (superelevation) influence avulsion frequency and location, impacting both delta morphology and the resulting stratigraphy. The model is structured modularly to invite further couplings with additional model components in the future.
Coupling natural-human systems at the decision-making scale
University of Waterloo
Canada
Our understanding of human systems has been synthesized and advanced by computationally representing human decision-making in agent-based models. Whether representing individuals, households, firms, or larger organization, agent-based modelling approaches are often used to model processes (e.g., urban growth, agricultural land management) that directly effect and are affected by natural systems. Contemporary efforts coupling models of human and natural systems have demonstrated that results significantly differ from isolated representations of either system. However, coupling models of human and natural systems is conceptually and computationally challenging. In addition to discussing these challenges and approaches to overcoming them, this talk will also suggest that research quantifying natural processes at the decision-making scale of the land user is needed. Using structure-from-motion and unmanned aerial vehicle (UAV) imagery, we can accurately quantify natural processes like soil erosion to a high level of accuracy and that frequently modelled processes (e.g., flow accumulation) typically differ from reality. Novel data from the field or parcel scale are needed to calibrate and validate our representation of natural processes if we are to advance our representation of feedbacks between natural processes and human decision-making. By improving our representation of both natural processes and human decision-making at the scale of the decision-maker, we add confidence in our ability to scale out to larger spatial extents that are reflective of natural processes (e.g., watershed) or policy driving human decisions from municipal, state, or national governments.
Sequence Stratigraphic Modeling in Landlab
LDEO, Columbia U
United States
Sequence is a modular 2D (i.e., profile) sequence stratigraphic model that is written in Python and implemented within the Landlab framework. Sequence represents time-averaged fluvial and marine sediment transport via differential equations. The modular code includes components to deal with sea level changes, sediment compaction, local or flexural isostasy, and tectonic subsidence and uplift. Development of the code was spurred by observations of repetitive stratigraphic sequences in western Turkey that are distorted by tectonics.
meanderpy: A simple model of meandering sheds light on channel kinematics and autogenic counter point bars
Bureau of Economic Geology, The University of Texas at Austin
United States
meanderpy is a Python implementation of a simple kinematic model of meandering, based on the Howard and Knutson (1984) model. In contrast with previous implementations, we assume a simple linear relationship between curvature and migration rate and, using time-lapse satellite imagery, show that the model predicts 55% of the variance in migration rates in seven rivers of the Amazon Basin. It also predicts the formation of autogenic counter point bars: deposits related to channel segments along which the curvature and migration rate vectors have opposing orientations. These finer-grained deposit types tend to form on the upstream side of high-curvature, short bends that rapidly translate downstream. Wrapping simple geomorphic surfaces around the centerlines allows us to build three-dimensional stratigraphic models of both fluvial and submarine meandering systems.
CSDMS 3.0 updates
University of Colorado
United States
CSDMS 3.0 updates



Clinic Leaders

Model Calibration with Dakota
University of Colorado, Boulder
United States
Many geophysical models require parameters that are not tightly constrained by observational data. Calibration represents methods by which these parameters are estimated by minimizing the difference between observational data and model simulated equivalents (the objective function). Additionally, uncertainty in estimated parameters is determined.

In this clinic we will cover the basics of model calibration including: (1) determining an appropriate objective function, (2) major classes of calibration algorithms, (3) interpretation of results.

In the hands-on portion of the the clinic, we will apply multiple calibration algorithms to a simple test case. For this, we will use Dakota, a package that supports the application of many different calibration algorithms.
Landcover and landform classification using deep neural networks
Northern Arizona University
United States
This clinic will introduce deep learning methods for semantic segmentation of fluvial sedimentary landforms and riparian environments, using high-resolution aerial imagery. Deep neural networks are the current state-of-the-art for discrete classification of remotely sensed imagery from Earth observation platforms. The clinic will guide users through the process of preparing training datasets, training models, and evaluation. A number of different deep convolutional neural network architectures for image feature extraction and pixel-scale classifications will be explored and compared. The clinic will use the keras and tensorflow libraries within the python programming language. This hands-on class will be taught using Google colab through a browser, with the materials hosted on github. Participants will require a working knowledge of python. Some working knowledge of machine learning would be helpful, but we will assume no prior experience with machine/deep learning, neural networks, tensorflow, or keras.
Real Time ADCIRC Modelling for Coastal Zone Decision Support
Seahorse Coastal Consulting
United States
The ADCIRC finite element coastal ocean model is used in real time decision support services for coastal and riverine hydrodynamics, tropical cyclone winds, and ocean wave modelling for public sector agencies including NOAA, FEMA, Coast Guard, and the US Army Corps of Engineers, among others. Recent developments in ADCIRC's real time automation system, the ADCIRC Surge Guidance System (ASGS), have now enabled real time modelling of active flood control scenarios (manipulation of pumps and flood gates) for decision support during riverine floods and tropical cyclone events. During these events, the results are presented to official decision makers with the Coastal Emergency Risks Assessment (CERA) web application, an intuitive and interactive tool that integrates model data with measured data to provide situational awareness across the area of responsibility. Case study events will be described, including official decisions that have been made with the ADCIRC in North Carolina (Irene 2011), Louisiana (Mississippi River flooding in 2016), and during the 2017 and 2018 hurricane seasons for Hurricanes Harvey, Irma, Maria, Florence, and Michael.
Pangeo: Scalable Geoscience Tools in Python — Xarray, Dask, and Jupyter
NCAR
United States
Earth scientists face serious challenges when working with large datasets. Pangeo is a rapidly growing community initiative and open source software ecosystem for scalable geoscience using Python. Three of Pangeo’s core packages are 1) Jupyter, a web-based tool for interactive computing, 2) Xarray, a data-model and toolkit for working with N-dimensional labeled arrays, and 3) Dask, a flexible parallel computing library. When combined with distributed computing, these tools can help geoscientists perform interactive analysis on datasets up to petabytes in size. In this interactive tutorial we will demonstrate how to employ this platform using real science examples from hydrology, remote sensing, and oceanography. Participants will follow along using Jupyter notebooks to interact with Xarray and Dask running in Google Cloud Platform.
Making your models and data FAIR - Findable, Accessible, Interoperable, and Reusable
U.S. Geological Survey
United States
Are you confused about the best way to make your models and data accessible, reusable, and citable by others? In this clinic we will give you tools, information, and some dedicated time to help make your models and data FAIR - findable, accessible, interoperable and reusable. Models in the CSDMS ecosystem are already well on their way to being more FAIR than models that are not. But here, you will learn more about developments, guidelines, and tools from recent gatherings of publishers, repository leaders, and information technology practitioners at recent FAIR Data meetings, and translate this information into steps you can take to make your scientific models and data FAIR.
Hands-on with the Python Modeling Toolkit
CSDMS
United States
PyMT is the “Python Modeling Toolkit”. It is an Open Source Python package, developed by the Community Surface Dynamics Modeling System, that provides tools used to couple models that expose the Basic Model Interface (BMI). PyMT is:
  • a toolbox for coupling models of disparate time and space scales,
  • a collection of Earth-surface models, and
  • an extensible plug-in framework for user-contributed models.

In this hands-on clinic we will use Jupyter Notebooks to explore how to run standalone models within PyMT. Since all PyMT models are based on the BMI, they all share the same user interface and so if you know how to run one model, you know how to run all PyMT models. We will then look at some of the model-coupling tools packaged with PyMT and how they can be used for more complex couplings. We will then run through examples that use these tools to couple models to data as well as to other PyMT models.

We highly recommend that clinic attendees come with a laptop with the Anaconda Python distribution installed.
Morphological modelling using Delft3D Flexible Mesh
Deltares
Netherlands
During the clinic we'll introduce the new Delft3D Flexible Mesh modeling environment. We'll discuss the basic features and set up a simple 2D morphological model. The ongoing developments and the possibility to use BMI for runtime interaction will be presented as well. The user interface runs on Windows, so make sure that you have a Windows computer or virtual machine available during the meeting. The user interface will be provided precompiled; the computational kernels you'll have to compile yourself. We'll provide instructions on how to compile the FORTRAN/C kernels before the clinic.
Model sensitivity analysis using SALib
Tulane University
United States
Interested in which variables influence your model outcome? SALib (Sensitivity Analysis Library) provides commonly used sensitivity analysis methods implemented in a Python programming language package. In this clinic we will use these methods with example models to apportion uncertainty in model output to model variables. We will use models built with the Landlab Earth-surface dynamics framework, but the analyses can be easily adapted for other model software. No prior experience with Landlab or Python is necessary.
Developing and teaching interactive sedimentology and stratigraphy computer activities
Rice University
United States
In this clinic, we will first demonstrate existing interactive computer-based activities used for teaching concepts in sedimentology and stratigraphy. This will be followed by a hands-on session for creating different modules based on the participants’ teaching and research interests. Active learning strategies improve student exam performance, engagement, attitudes, thinking, writing, self-reported participation and interest, and help students become better acquainted with one another (Prince, 2004). Specifically, computer-based active learning is an attractive educational approach for post-secondary educators, because developing these activities takes advantage of existing knowledge and skills the educator is likely to already have.

The demonstration portion of the clinic will focus on the existing rivers2stratigraphy (https://github.com/sededu/rivers2stratigraphy) activity, which illustrates basin-scale development of fluvial stratigraphy through adjustments in system kinematics including sandy channel migration and subsidence rates. The activity allows users to change these system properties, so as to drive changing depositional patterns. The module utilizes a rules based model, which produces realistic channel patterns, but simplifies the simulation to run efficiently, in real-time. The clinic will couple rivers2stratigraphy to a conventional laboratory activity which interprets an outcrop photograph of fluvial stratigraphy, and discuss logistics of using the module in the classroom.

For the second part of the clinic, familiarity with Python will be beneficial (but is not required); we will utilize existing graphical user interface (GUI) frameworks in developing new activities, aimed to provide a user-friendly means for students to interact with model codes while engaging in geological learning. Participants should plan to have Python installed on their personal computers prior to the workshop, and a sample module will be emailed beforehand to let participants begin exploring the syllabus.

Prince, M. (2004). Does Active Learning Work? A Review of the Research. Journal of Engineering Education, 93(3), 223-231. doi: 10.1002/j.2168-9830.2004.tb00809.x.
BMI Live!
CSDMS IF, University of Colorado, Boulder
United States
In software engineering, an interface is a group of functions with prescribed names, argument types, and return types. When a developer implements an interface for a piece of software, they fill out the details for each function while keeping the signatures intact. CSDMS has developed the Basic Model Interface (BMI) for facilitating the conversion of a model written in C, C++, Fortran, Python, or Java into a reusable, plug-and-play component. By design, BMI functions are simple. However, when trying to implement them, the devil is often in the details.

In this hands-on clinic, we'll take a simple model of the two-dimensional heat equation, written in Python, and together we'll write the BMI functions to wrap it, preparing it for transformation into a component. As we develop, we’ll explore how to use the wrapped model with a Jupyter Notebook.

To get the most out of this clinic, come prepared to code! We'll have a lot to write in the time allotted for the clinic. We recommend that clinic attendees have a laptop with the Anaconda Python distribution installed. We also request that you review the

before the start of the clinic.
CUAHSI Services for Hydrologic Modeling and Data
CUAHSI
United States
This clinic will introduce CUAHSI products that support hydrologic modeling and analysis workflows. The HydroShare and JupyterHub platforms will be used to demonstrate the cyberinfrastructure capabilities that have been designed for community modeling and educational purposes. Participants should have a working knowledge of Python and should bring a laptop.
An Introduction to CUDA-enabled DES3D
CERI, University of Memphis
United States
DES3D (Dynamic Earth Solver in Three Dimensions) is a flexible, open-source finite element solver that models momentum balance and heat transfer in elasto-visco-plastic material in the Lagrangian form using unstructured meshes. It provides a modeling platform for long-term tectonics as well as various problems in civil and geotechnical engineering. On top of the OpenMP multi-thread parallelism, DES3D has recently adopted CUDA for GPU computing. The CUDA-enabled version shows speedup of two to three orders of magnitude compared to the single-thread performance, making high-resolution 3D models affordable. This clinic will provide an introduction to DynEarthSol3D’s features and capabilities and hands-on tutorials to help beginners start using the code for simple tectonic scenarios. Impact of the two types of parallelization on performance will be demonstrated as well.


Interested in providing a clinic during a next annual meeting? Contact CSDMS@Colorado.EDU.

Reimbursement

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Within its budget, CSDMS intends to partially support member applicants to attend the annual meeting. Towards this goal, we encourage members to fully or partially cover their expenses if capable. We additionally thank those in the industry and agency fields for understanding that 1) we cannot compensate federal agency participants since our own funding is from NSF, and 2) we request that our industrial/ corporate participants cover their own costs thereby allowing more academic participants to attend.

CSDMS is able to provide the following meeting support:
NOTICE: The maximum number of participants that can be supported for lodging was reached on March 5th, 2019. Feel free to register for the meeting but realize that you are responsible for supporting your own lodging. CSDMS has negotiated a preferred rate for attendees still needing lodging at the Millennium Harvest House Hotel. You can view and book rooms through this link: Millennium Preferred Meeting Rates

  • Breakfast and lunch each day of the meeting and one dinner, shuttle service between the Boulder Marriott/Residence Inn/Millennium Harvest House Hotel and meeting venue will be provided for all registrants.

Scholarship recipients, Keynote presenters, Clinic leaders and Awardees - travel support, registration support and lodging as specified in your invitation letter, breakfast and lunch each day of the meeting and one dinner, shuttle service between meeting hotel and meeting venue.

Specific reimbursement procedures will be emailed to qualified attendees along with your final confirmation early May, 2019.

Important for foreign travelers: If you need a visa to travel to USA, select a business visa. Please email CSDMS@Colorado.EDU as soon as possible if you need an invitation letter along with your passport number, affiliation and entry/exit dates and indicate any specific wording if required. We will need to copy the entry stamp in your passport sometime during the meeting as proof that you were here on business as required by US tax laws (especially when dealing with airfare reimbursements).

Travel, Lodging and Conference Center Information

Meeting venue: SEEC at the University of Colorado's East Campus in Boulder.
Hotel: The CSDMS supported hotel block will be split between adjacent hotels, the Boulder Marriott and the Residence Inn. On March 5th the CSDMS-supported rooms were fully booked and therefore, no additional hotel support is available for registrants after that date. CSDMS has negotiated a preferred rate at the Millennium Harvest House Hotel for those still needing lodging (Unfortunately, the CSDMS meeting budget does not allow us to provide hotel support or reimbursement for these rooms).
Transportation: You can book transportation between DIA and Boulder here: Green Ride Boulder. And information on how to find Green Ride Boulder at DIA.

A bus between the designated Hotels (Marriott/Residence Inn and Millennium) and the meeting venue will be provided each day (the shuttle is not able to stop at other hotels). We will also provide transportation from the designated Hotel to the banquet (again, the shuttle is not able to stop at other hotels). Please note that the parking adjacent to the SEEC building requires payment for non-permit holders. You will need to park in the limited designated areas and provide payment in the adjacent kiosks.

Pre-conference events

The following will apply to two of the pre-conference events: Software Carpentry workshop, and Quantifying Uncertainty in Earth Systems :

  • Registration is open until April 1st (or until program fills) and is handled through the 2019 meeting site.
  • Each is capped at 30 participants (all first paid first serve), and it has a $30 registration fee.
  • Participant will be responsible for cost / organization of their extra day of hotel accommodation and dinner. Costs will not be reimbursed.
  • We will cover coffee, continental breakfast and lunch during each of the events.

1) Software Carpentry workshop

CSDMS will host a one-day pre-conference Software Carpentry workshop on Monday, May 20, 2019. The goal of the workshop is to teach basic programming skills that will be useful for scientific research and model development. This is an intensive, hands-on workshop, during which certified instructors will cover basic elements of:

  • the Unix bash shell,
  • Python programming, and
  • Github for version control.

The instructors, Mariela Perignon and Mark Piper, are earth scientists, so lessons and examples will be targeted toward relevant problems in your field. The workshop intentionally precedes the CSDMS Annual Meeting so that the skills you develop can be used in the clinics during the meeting.

2) Quantifying Uncertainty in Earth Systems

This one-day pre-conference workshop provided by Professor Jef Caers, Stanford University on Monday, May 20, 2019 will cover the quantification of uncertainty in Earth Systems using a protocol termed Bayesian Evidential Learning. The course will walk through the steps of this protocol consisting of prior model specification, monte Carlo & model falsification, global sensitivity analysis, Mont-Carlo based inverse modeling and posterior model falsification.

The workshop will focus on the high-level principles and understanding, and on actual practical examples rather than the technical or theoretical details. There will be no software exercises on-site, but such resources will be made available during the workshop with some demos using Jupyter notebooks.

The application will focus on subsurface systems as an example of Earth systems, in particular, I will cover application in groundwater hydrology as well as shallow and deep geothermal energy as specific examples.

Prerequisites: participant will need to have taken a basic course in statistics and probability theory, know about Bayes Rule, probability distributions, expectation, conditional probability and the basics of statistical calculations and exploratory data analysis.

Reference: Quantifying Uncertainty in Subsurface Systems, Scheidt, C., Li, L. & Caers, J., 2018, Wiley-AGU Monograph.

Questions?: jcaers@stanford.edu

Student Scholarships and travel awards

CSDMS Scholarships

This year CSDMS is offering a limited number of scholarships (up to 7) for graduate students to attend the CSDMS annual meeting. These scholarships will be offered for the purpose of increasing participation of underrepresented students or those that have not previously attended a CSDMS Annual Meeting. To be eligible, graduate students need to meet the following requirements:

  • Attend the whole meeting (May 21-23, 2019)
  • Submit an abstract
  • Be enrolled as a graduate student at the time of the meeting (bring proof)
  • Submit a letter of motivation that states why you wish to participate in the meeting, and explain how your participation would enhance diversity in the field of natural hazards and surface dynamics modeling. Be sure to mention if it is your first time attending.

Send your application materials to csdms@colorado.edu by February 8th, 2019. The CSDMS scholarships will cover:

  • Registration costs (you will still need to pay the registration fee, but will be reimbursed after attending the meeting)
  • Hotel accommodations for three nights, May 20, 21 and 22st. (as outlined in Travel/Lodging section above - 100% paid if you agree to a roommate)
  • Travel (air fare ONLY within the United States and local shuttle transport)
  • Per diem to help reimburse the cost of meals from 21-23 May 2019 not offered in the conference schedule

All applicants will receive confirmation of their submission. Please notify us at csdms@colorado.edu if you do not receive confirmation within 24 hours of submission.

LAND Travel Awards

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The journal LAND is inviting applications for two Travel Awards for postdoctoral fellows and PhD students in the area of land systems science to attend the CSDMS annual meeting. The nominations and applications will be assessed by an Evaluation Committee chaired by the Editor-in-Chief of Land: Prof. Andrew Millington.

Candidates’ Requirements:

  • Applicants must be postdoctoral fellows or PhD students involved in land systems science;
  • Applicants will attend an international conference in 2019 to present their research (oral presentation or poster).

Applicants need to submit the following documents:

  • An abstract of your work (500 words);
  • A short CV with complete list of publications;
  • The conference you plan to attend and the oral or poster abstract that will be presented;
  • A letter of recommendation from a supervisor or PI (Principal Investigator). The supervisor or PI should sign and confirm that the applicant fulfills requirements.

The Award will consist of 800 (Swiss Francs) each. Please send the applications here (http://www.mdpi.com/journal/land/awards) by 15 January 2019. The winner will be announced in Land by 1 March 2019.

Important dates

  • January 14th: Deadline for student modeler competition submission
  • January 14th: Registration opens and early registration fees ($200) apply till April 1st
  • January 15th: Deadline LAND travel awards
  • February 1st: Student modeler competition results announced
  • February 8th: Deadline for student scholarship applications CSDMS
  • February 28th: Scholarship awardees notified
  • April 1st: Deadline: a) abstract submission, b) discounted early registration ($200), and c) meeting supported hotel reservations (unless our cap of 75 lodgers has already been met). After this deadline, reservations and accommodation costs will be responsibility of participant. Regular registration fee ($400) April 2 to May 1.
  • May 9th: Deadline registration
  • May 20th: CSDMS 1day pre conference workshops
  • May 21-23rd: CSDMS annual meeting
  • May 24th: CSDMS Executive and Steering committees meetings (by invitation only)


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