Model:Sedflux: Difference between revisions

From CSDMS
m (Add to Model category)
m (Text replacement - "{{End headertab}}" to "{{End headertab}} {{{{PAGENAME}}_autokeywords}}")
 
(95 intermediate revisions by 4 users not shown)
Line 1: Line 1:
{{Infobox Model
{{Model identity
|model name              = sedflux
|Model type=Modular
|developer                = '''Hutton''', Eric
|one-line-description    = Basin filling stratigraphic model
|type                     = Model
|available source code    = source
}}
}}
{{Start models incorporated}}
{{End a table}}
{{Model identity2
|ModelDomain=Coastal, Marine
|Spatial dimensions=2D, 3D
|One-line model description=Basin filling stratigraphic model
|Extended model description=Sedflux-2.0 is the newest version of the Sedflux basin-filling model. Sedflux-2.0 provides a framework within which individual process-response models of disparate time and space resolutions communicate with one another to deliver multi grain sized sediment load across a continental margin.
}}
{{Start model keyword table}}
{{Model keywords
|Model keywords=sediment transport
}}
{{Model keywords
|Model keywords=geodynamics
}}
{{Model keywords
|Model keywords=stratigraphy
}}
{{End a table}}
{{Modeler information
|First name=Eric
|Last name=Hutton
|Type of contact=Model developer
|Institute / Organization=CSDMS, INSTAAR, University of Colorado
|Postal address 1=1560 30th street
|Town / City=Boulder
|Postal code=80305
|Country=United States
|State=Colorado
|Email address=huttone@colorado.edu
}}
{{Model technical information
|Supported platforms=Unix, Linux, Mac OS
|Programming language=C
|Start year development=1997
|Does model development still take place?=Yes
|DevelopmentCode=Only maintenance
|DevelopmentCodeYearChecked=2020
|Model availability=As code
|Source code availability=Through web repository
|Source web address=https://github.com/mcflugen/sedflux
|Program license type=GPL v2
|Memory requirements=2GB
|Typical run time=minutes to days
}}
{{Input - Output description
|Describe input parameters=River mouth characteristics (velocity, width, depth, concentration) averaged daily, or longer.
Initial bathymetry. Input sediment distribution and properties of each grain type. Optionally, any of: tectonics, sea level, wave climate, and currents
|Input format=ASCII
|Describe output parameters=Sediment properties that include (but are not limited to) bulk density, grain size, porosity, and permeability. These are averaged over are user-specified vertical resolution (typically mm to cm).
Sea-floor properties that include slope, water depth, and sand fraction.
|Output format=Binary
|Pre-processing software needed?=No
|Post-processing software needed?=No
|Visualization software needed?=Yes
|If above answer is yes=Matlab
}}
{{Process description model
|Describe processes represented by the model=surface plumes, hyperpycnal plumes, sediment slope failure that results in turbidity currents or debris flows, subsidence, compaction, sediment remobilization due to waves and currents, river avulsion
|Describe key physical parameters and equations=Too numerous to list.
|Describe length scale and resolution constraints=Vertically: mm to cm; Horizontally: 10s of m to 1000 of m
|Describe time scale and resolution constraints=Days or greater. Component processes can have much higher resolutions for numerical stability.
|Describe any numerical limitations and issues=--
}}
{{Model testing}}
{{Users groups model
|Do you have current or future plans for collaborating with other researchers?=None
}}
{{Documentation model
|Manual model available=Yes
|Model website if any=https://github.com/mcflugen/sedflux
}}
{{Additional comments model
|Comments=No
}}
{{CSDMS staff part
|OpenMI compliant=No but possible
|IRF interface=Yes
|CMT component=Yes
|PyMT component=Yes
|CCA component=Yes
}}
{{DOI information
|DOI model=10.1594/IEDA/100161
|DOI assigned to model version=2.1
|DOI-year assigned to model version=2011
|DOI-filelink=https://csdms.colorado.edu/pub/models/doi-source-code/sedflux-10.1594.IEDA.100161-2.1.tar.gz
}}
{{Start coupled table}}
{{End a table}}
{{End headertab}}
{{{{PAGENAME}}_autokeywords}}
<!-- available source code can be: not, owner, source, commercial -->
<!-- available source code can be: not, owner, source, commercial -->


= sedflux =
 
=== ''sedflux-2.0'' <ref>Hutton and Syvitski, 2008.  Sedflux-2.0: An advanced process-response model that generates three-dimensional stratigraphy.  Computers and Geosciences, v. 34. [http://dx.doi.org/10.1016/j.cageo.2008.02.013 doi:10.1016/j.cageo.2008.02.013]</ref> <ref>Syvitski and Hutton, 2001.  2D SEDFLUX 1.0C: an advanced process-response numerical model for the fill of marine sedimentary basins.  Computers and Geosciences, v. 27.  [http://dx.doi.org/10.1016/S0098-3004(00)00139-4 doi:10.1016/S0098-3004(00)00139-4] </ref> ===
 
== ''sedflux-2.0''  ==


[[ image:Subsidence.jpg | 350 px | right ]]
[[ image:Subsidence.jpg | 350 px | right ]]
http://www.ohloh.net/projects/sedflux/widgets/project_partner_badge.gif
Sedflux-2.0 is the newest version of the Sedflux basin-filling model. Sedflux-2.0 provides a framework within which individual process-response models of disparate time and space resolutions communicate with one another to deliver multi grain sized sediment load across a continental margin. Version 2.0 introduces a series of new process models, and the ability to operate in one of two modes to track the evolution of stratigraphy in either two or three dimensions. Additions to the 2D-mode include the addition of models that simulate
Sedflux-2.0 is the newest version of the Sedflux basin-filling model. Sedflux-2.0 provides a framework within which individual process-response models of disparate time and space resolutions communicate with one another to deliver multi grain sized sediment load across a continental margin. Version 2.0 introduces a series of new process models, and the ability to operate in one of two modes to track the evolution of stratigraphy in either two or three dimensions. Additions to the 2D-mode include the addition of models that simulate


Line 24: Line 118:
# two-dimensional flexure due to sediment loading.  
# two-dimensional flexure due to sediment loading.  


The spatial resolution of the architecture is typically 1-25 cm in the vertical, and 10-100 m in the horizontal when operating in 2D-mode. In 3D-mode, the horizontal resolution usually extends to kilometers. In addition to fixed time steps (from days to hundreds of years), Sedflux-2.0 offers event-based time stepping as a way to conduct long-term simulations while still modeling low-frequency but high-energy events.
The spatial resolution of the architecture is typically 1-25 cm in the vertical, and 10-100 m in the horizontal when operating in 2D-mode. In 3D-mode, the ....
 
http://www.ohloh.net/projects/sedflux/widgets/project_partner_badge.gif
 
 
 
__TOC__
== Introduction ==
 
 
== History ==
 
== Papers ==
 
 
=== ''sedflux'' Questionnaire ===
 
==== Contact Information ====
 
{| class=wikitable
| class="model_col1" | Model
| class="model_col2" | sedflux
|-
| class="model_col1" | Contact Person
| class="model_col2" | Eric Hutton
|-
| class="model_col1" | Institution
| class="model_col2" | University of Colorado
|-
| class="model_col1" | City
| class="model_col2" | Boulder, CO
|-
| class="model_col1" | Country
| class="model_col2" | USA
|-
| class="model_col1"| Email:
| class="model_col2"| --
|-
| class="model_col1"| 2nd person involved:
| class="model_col2"| --
|-
| class="model_col1"| 3rd person involved:
| class="model_col2"| --
|}
 
==== Model Description ====
 
{| class=wikitable
| class="model_col1"| Model type:
| class="model_col2"| Modular model
|-
| class="model_col1"| Description:
| class="model_col2"| Sedflux-2.0 is the newest version of the Sedflux basin-filling model. Sedflux-2.0 provides a framework within which individual process-response models of disparate time and space resolutions communicate with one another to deliver multi grain sized sediment load across a continental margin.
|}
 
==== Technical Information ====
 
{| class=wikitable
| class="model_col1"| Supported platforms:
| class="model_col2"| Unix, Linux, Mac OSX
|-
| class="model_col1"| Programming language:
| class="model_col2"|  C
|-
| class="model_col1"| Model was developed started from:
| class="model_col2"| 1997 and development still takes place
|-
| class="model_col1"| To what degree will the model become available:
| class="model_col2"| As code and as executable
|-
| class="model_col1"| Current license type:
| class="model_col2"| GPL_v2
|-
| class="model_col1"| Memory requirements:
| class="model_col2"| 2GB
|-
| class="model_col1"| Typical run time:
| class="model_col2"| minutes to days
|}
 
==== Input / Output Description ====
 
{| class=wikitable
| class="model_col1"| Input parameters:
| class="model_col2"| River mouth characteristics (velocity, width, depth, concentration) averaged daily, or longer.
Initial bathymetry.
Input sediment distribution and properties of each grain type.
Optionally, any of: tectonics, sea level, wave climate, and currents
|-
| class="model_col1"| Input format:
| class="model_col2"| ASCII
|-
| class="model_col1"| Output parameters:
| class="model_col2"| Sediment properties that include (but are not limited to) bulk density, grain size, porosity, and permeability.  These are averaged over are user-specified vertical resolution (typically mm to cm).
Sea-floor properties that include slope, water depth, and sand fraction.   
|-
| class="model_col1"| Output format:
| class="model_col2"| Binary
|-
| class="model_col1"| Post-processing software (if needed):
| class="model_col2"| no
|-
| class="model_col1"| Visualization software (if needed):
| class="model_col2"| Yes, Matlab
|}
 
 
==== Process Description ====
 
{| class=wikitable
| class="model_col1"| Processes represented by model:
| class="model_col2"| surface plumes, hyperpycnal plumes, sediment slope failure that results in turbidity currents or debris flows, subsidence, compaction, sediment remobilization due to waves and currents, river avulsion
|-
| class="model_col1"| Key physical parameters & equations:
| class="model_col2"| Too numerous to list.
|-
| class="model_col1"| Length scale & resolution constraints:
| class="model_col2"| Vertically: mm to cm; Horizontally: 10s of m to 1000 of m
|-
| class="model_col1"| Time scale & resolution constraints:
| class="model_col2"| Days or greater. Component processes can have much higher resolutions for numerical stability.
|-
| class="model_col1"| Numerical limitations and issues :
| class="model_col2"| --
|}
 
 
==== Testing ====
{| class=wikitable
| class="model_col1"| Available calibration data sets:
| class="model_col2"| --
|-
| class="model_col1"| Available test data sets:
| class="model_col2"| --
|-
| class="model_col1"| Ideal data for testing:
| class="model_col2"| --
|}
 
 
==== User Groups ====
 
{| class=wikitable
| class="model_col1"| Currently or plans for collaborating with:
| class="model_col2"| None
|}
 
 
==== Documentation ====
 
{| class=wikitable
| class="model_col1"| Key papers of the model:
| class="model_col2"|  Hutton and Syvitski, 2008 ([http://dx.doi.org/10.1016/j.cageo.2008.02.013 doi:10.1016/j.cageo.2008.02.013])
Syvitski and Hutton, 2001 ([http://dx.doi.org/10.1016/S0098-3004(00)00139-4 doi:10.1016/S0098-3004(00)00139-4])
|-
| class="model_col1"| Is there a manual available:
| class="model_col2"|  Yes
|-
| class="model_col1"| Model website if any:
| class="model_col2"|[http://sedflux.googlecode.com http://sedflux.googlecode.com]
|}
 
==== Additional Comments ====
{| class=wikitable
| class="model_col1"| Comments:
| class="model_col2"|  No
|}
 
 
 
== Issues ==
To report an issue with ''sedflux'', please go to its development site on googlecode:
[http://code.google.com/p/sedflux/issues/list http://code.google.com/p/sedflux/issues/list ]
 
 
== Help ==
 
== Input Files ==
 
== Output Files ==
 
== Download ==
 
=== Source-Code Snapshots ===
 
==== Nightly Snapshot ====
The latest version of ''sedflux'' can be found on the CSDMS ftp site as <tt>sedflux-latest.tar.gz</tt>.  This will always point to the latest version. 
:http://csdms.colorado.edu/pub/models/sedflux/sedflux-latest.tar.gz
 
==== Releases ====
:No releases yet
 
==== Past Snapshots ====
:[[media:sedflux-2.0.37.tar.gz|sedflux-2.0.37.tar.gz]] (28/12/2007)
:[[media:sedflux-2.0.34.tar.gz|sedflux-2.0.34.tar.gz]] (21/12/2007)
 
=== Extras ===
 
====Installer====
:[http://sedflux.googlecode.com/files/sedflux-contractor-0.1.tar.gz sedflux-contractor-0.1.tar.gz]
 
==== Input Files ====
:[http://sedflux.googlecode.com/files/sedflux-input-0.1.tar.gz sedflux-input-0.1.tar.gz]
 
==== Regression Tests ====
:[http://sedflux.googlecode.com/files/sedflux-tests-0.1.tar.gz sedflux-tests-0.1.tar.gz]
 
==== Visualization Files ====
:[http://sedflux.googlecode.com/files/sedflux-mfiles-0.1.tar.gz sedflux-mfiles-0.1.tar.gz]
 
== Source ==
 
To browse the ''sedflux'' repository, point your browser to: [http://csdms.colorado.edu/viewvc/sedflux/?root=sedflux http://csdms.colorado.edu/viewvc/sedflux/?root=sedflux]
 
=== Command-Line Access ===
 
If you plan to make changes, use this command to check out the code as yourself using HTTPS:
 
<geshi lang=bash>
# Project members authenticate over HTTPS to allow committing changes.
svn checkout https://csdms.colorado.edu/svn/sedflux/sedflux
</geshi>
 
When prompted, enter your CSDMS Subversion password.
 
Non-members may only check out a read-only working copy of the project source.
 
To obtain a CSDMS Subversion account or to become a member of this project, please email [mailto:csdms@colorado.edu csdms@colorado.edu].
 
=== GUI and IDE Access ===
 
This project's Subversion repository may be accessed using many different client programs and plug-ins. See your client's documentation for more information.
 
=== Subversion Help ===
 
For help on how to use Subversion, an excellent manual is available online at [http://svnbook.red-bean.com/ http://svnbook.red-bean.com/]
 
 
== References ==
<references/>


<!-- This page is no longer viewable. Need to update link when a new page is created.
[https://csdms.colorado.edu/trac/sedflux/ Read more....].
-->


[[Category:Model]]
== References  ==
[[Category:Marine]]
<br>{{AddReferenceUploadButtons}}<br><br>
{{#ifexist:Template:{{PAGENAME}}-citation-indices|{{{{PAGENAME}}-citation-indices}}|}}<br>
{{Include_featured_references_models_cargo}}<br>

Latest revision as of 20:18, 16 September 2020



Sedflux


Metadata

Also known as
Model type Modular
Model part of larger framework
Note on status model
Date note status model
Incorporated models or components:
Spatial dimensions 2D, 3D
Spatial extent
Model domain Coastal, Marine
One-line model description Basin filling stratigraphic model
Extended model description Sedflux-2.0 is the newest version of the Sedflux basin-filling model. Sedflux-2.0 provides a framework within which individual process-response models of disparate time and space resolutions communicate with one another to deliver multi grain sized sediment load across a continental margin.
Keywords:

sediment transport, geodynamics, stratigraphy,

Name Eric Hutton
Type of contact Model developer
Institute / Organization CSDMS, INSTAAR, University of Colorado
Postal address 1 1560 30th street
Postal address 2
Town / City Boulder
Postal code 80305
State Colorado
Country United States
Email address huttone@colorado.edu
Phone
Fax


Supported platforms
Unix, Linux, Mac OS
Other platform
Programming language

C

Other program language
Code optimized
Multiple processors implemented
Nr of distributed processors
Nr of shared processors
Start year development 1997
Does model development still take place? Yes
If above answer is no, provide end year model development
Code development status Only maintenance
When did you indicate the 'code development status'? 2020
Model availability As code
Source code availability
(Or provide future intension) 		Through web repository
Source web address https://github.com/mcflugen/sedflux
Source csdms web address
Program license type GPL v2
Program license type other
Memory requirements 2GB
Typical run time minutes to days


Describe input parameters River mouth characteristics (velocity, width, depth, concentration) averaged daily, or longer.

Initial bathymetry. Input sediment distribution and properties of each grain type. Optionally, any of: tectonics, sea level, wave climate, and currents

Input format ASCII
Other input format
Describe output parameters Sediment properties that include (but are not limited to) bulk density, grain size, porosity, and permeability. These are averaged over are user-specified vertical resolution (typically mm to cm).

Sea-floor properties that include slope, water depth, and sand fraction.

Output format Binary
Other output format
Pre-processing software needed? No
Describe pre-processing software
Post-processing software needed? No
Describe post-processing software
Visualization software needed? Yes
If above answer is yes Matlab
Other visualization software


Describe processes represented by the model surface plumes, hyperpycnal plumes, sediment slope failure that results in turbidity currents or debris flows, subsidence, compaction, sediment remobilization due to waves and currents, river avulsion
Describe key physical parameters and equations Too numerous to list.
Describe length scale and resolution constraints Vertically: mm to cm; Horizontally: 10s of m to 1000 of m
Describe time scale and resolution constraints Days or greater. Component processes can have much higher resolutions for numerical stability.
Describe any numerical limitations and issues --


Describe available calibration data sets
Upload calibration data sets if available:
Describe available test data sets
Upload test data sets if available:
Describe ideal data for testing


Do you have current or future plans for collaborating with other researchers? None
Is there a manual available? Yes
Upload manual if available:
Model website if any https://github.com/mcflugen/sedflux
Model forum / discussion board
Comments No


This part will be filled out by CSDMS staff

OpenMI compliant No but possible
BMI compliant Yes
WMT component Yes
PyMT component Yes
Is this a data component
DOI model 10.1594/IEDA/100161
For model version 2.1
Year version submitted 2011
Link to file https://csdms.colorado.edu/pub/models/doi-source-code/sedflux-10.1594.IEDA.100161-2.1.tar.gz
Can be coupled with:
Model info
Authors
Eric Hutton
Source code
DOI

Model citations
Nr. of publications: 25
Total citations: 766
h-index: 14
m-quotient: 0.61
QR-code
Qrcode Sedflux.png
Link to this page
Other models by author



sedflux-2.0

Subsidence.jpg

project_partner_badge.gif

Sedflux-2.0 is the newest version of the Sedflux basin-filling model. Sedflux-2.0 provides a framework within which individual process-response models of disparate time and space resolutions communicate with one another to deliver multi grain sized sediment load across a continental margin. Version 2.0 introduces a series of new process models, and the ability to operate in one of two modes to track the evolution of stratigraphy in either two or three dimensions. Additions to the 2D-mode include the addition of models that simulate

  1. erosion and deposition of sediment along a riverbed,
  2. cross-shore transport due to ocean waves, and
  3. turbidity currents and hyperpycnal flows.

New processes in the 3D-mode include

  1. river channel avulsion,
  2. two-dimensional diffusion due to ocean storms, and
  3. two-dimensional flexure due to sediment loading.

The spatial resolution of the architecture is typically 1-25 cm in the vertical, and 10-100 m in the horizontal when operating in 2D-mode. In 3D-mode, the ....


References



Nr. of publications: 25
Total citations: 766
h-index: 14
m-quotient: 0.61



Featured publication(s)YearModel describedType of ReferenceCitations
Overeem, I.; Syvitski, J.P.M.; Hutton, E.W.H.; 2005. Three-dimensional numerical modeling of deltas.. River Deltas: concepts, models and examples. Volume 83.
(View/edit entry)		2005 AquaTellUs
Sedflux

Model overview

59
Hutton, Eric W.H.; Syvitski, James P.M.; 2008. Sedflux 2.0: An advanced process-response model that generates three-dimensional stratigraphy. Computers &amp; Geosciences, 34, 1319–1337. 10.1016/j.cageo.2008.02.013
(View/edit entry)		2008 Avulsion
Diffusion
Plume
Sedflux
Subside
 Model overview 67
Syvitski, James P.M; Hutton, Eric W.H; 2001. 2D SEDFLUX 1.0C:. Computers &amp; Geosciences, 27, 731–753. 10.1016/S0098-3004(00)00139-4
(View/edit entry)		2001 Diffusion
Sedflux
 Model overview 97
See more publications of Sedflux


Retrieved from "https://csdms.colorado.edu/csdms_wiki/index.php?title=Model:Sedflux&oldid=300012"