Model:RiverMUSE

Edit Model information

RiverMUSE

Metadata

Summary Contact Technical specs In/Output Process Testing Other Component info Also known as River Mussel-Sediment Interaction Model Model type Single Model part of larger framework Note on status model Date note status model Incorporated models or components: Spatial dimensions 1D Spatial extent Reach-Scale Model domain Terrestrial, Hydrology, Ecosystems One-line model description Simulates freshwater mussel populations' response to changes in suspended sediment Extended model description This model simulates the interaction between suspended sediment, chlorophyll-a, and mussel population density. Discharge is the driver; it modulates suspended sediment and its interactions in the system. The model is suitable for simulating mussel densities at-a-site. It was originally developed to test the hypothesis that increased sediment loads in Minnesota Rivers are a plausible cause of observed mussel population declines. The model and results are described in detail in the following paper: https://doi.org/10.1086/684223 Keywords: mussels, Matlab, suspended sediment, chlorophyll, anthropogenic impact, Name Jon Schwenk Type of contact Model developer Institute / Organization Los Alamos National Laboratory Postal address 1 Postal address 2 Town / City Los Alamos Postal code 87544 State New Mexico Country United States Email address jonschwenk@gmail.com Phone Fax Supported platforms Unix, Linux, Mac OS, Windows Other platform Programming language Matlab Other program language Code optimized Single Processor Multiple processors implemented Nr of distributed processors Nr of shared processors Start year development 2014 Does model development still take place? No If above answer is no, provide end year model development 2015 Code development status As is, no updates are provided When did you indicate the 'code development status'? 2020 Model availability As code Source code availability (Or provide future intension) Through CSDMS repository Source web address Source csdms web address https://github.com/csdms-contrib/Mussels Program license type GPL v2 Program license type other Memory requirements Typical run time seconds Describe input parameters See the readme file. Input format Other input format Describe output parameters See the readme file. Output format Other output format Pre-processing software needed? No Describe pre-processing software Post-processing software needed? No Describe post-processing software Visualization software needed? No If above answer is yes Other visualization software Describe processes represented by the model See the associated published paper: https://doi.org/10.1086/684223 Describe key physical parameters and equations See the associated published paper: https://doi.org/10.1086/684223 and the readme file for parameter descriptions. Describe length scale and resolution constraints Spatial scale is implicit; resolution is n/a. Describe time scale and resolution constraints Model constructed for daily time steps, but can be altered with little effort. Describe any numerical limitations and issues None known; the model requires very little computational expense. Describe available calibration data sets See readme file and the associated published paper: https://doi.org/10.1086/684223. Calibration must be performed on a site-by-site basis; the provided data do not permit calibration for our sites, but we do include the calibrated parameters and explain our methods. Upload calibration data sets if available: Describe available test data sets Upload test data sets if available: Describe ideal data for testing Do you have current or future plans for collaborating with other researchers? This was an effort by a team that no longer works together closely as a whole, although we collaborate in other arenas. As far as I know, there are no current plans to collaborate regarding this model, although it has been shared with various researchers for their projects. Is there a manual available? No Upload manual if available: Model website if any Model forum / discussion board Comments This part will be filled out by CSDMS staff OpenMI compliant No but possible BMI compliant No but possible WMT component No but possible PyMT component Is this a data component Can be coupled with:

Model info Authors Jon Schwenk Source code View in CSDMS GitHub repository Model citations Nr. of publications: 1 Total citations: 30 h-index: 1 m-quotient: 0.1 QR-code Link to this page Other models by author Rabpro RivGraph RivMAP RiverMUSE

References

Automatically enter Reference by DOI

Manually enter Reference

Nr. of publications:	1
Total citations:	30
h-index:	1
m-quotient:	0.1

Featured publication(s)	Year	Model described	Type of Reference	Citations
Hansen, Amy T.; Czuba, Jonathan A.; Schwenk, Jon; Longjas, Anthony; Danesh-Yazdi, Mohammad; Hornbach, Daniel J.; Foufoula-Georgiou, Efi; 2016. Coupling freshwater mussel ecology and river dynamics using a simplified dynamic interaction model. Freshwater Science, 35, 200–215. 10.1086/684223 (View/edit entry)	2016	RiverMUSE	Model overview	30
See more publications of RiverMUSE