User:Huttone

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Revision as of 14:32, 1 October 2008 by Huttone (talk | contribs) (Add CSDMS subversion notes)

Eric Hutton

Contact Information

Office

Room 211
3100 Marine St.
Boulder, CO

Mailing Address

545 UCB
Boulder, CO 80309-0545
USA

Notes

Create a CSDMS subversion repository

First of all, our subversion repository is located on mysticplum at: /mysticplum/data/subversion. To add a new user: <geshi> > /usr/local/apache/bin/htdigest /mysticplum/data/subversion/conf/svn-auth-file Subversion <username> </geshi> This of course must be done as root. The username needn't be a mysticplum username (although it can be).

Create the new repository (again as root): <geshi> > svnadmin create /mysticplum/data/subversion/newrepos </geshi> Create a project group that contains members that are allowed to view and commit changes to the project. In addition, allow anyone to be able to browse the contents of the repository. This is done by editing subversion/conf/svn-access-file. To create a new group, define it and its members under the [groups] section: <geshi> [groups] newgroup = huttone </geshi> In this case, the group is called newgroup (it doesn't have to match a repository name) and the only member of the group is huttone. Now specify the access privileges of the repository: <geshi> [newgroup:/]

  • = r

@newrepos = rw </geshi> The first line indicates the repository, the second allows viewing of the repository by anyone, and the third limits commits to only group members. Change ownership of the directory to be nobody: <geshi lang=bash> > sudo chown -R nobody /mysticplum/data/subversion/newrepos </geshi> The new repository can now be viewed with a browser at https://csdms.colorado.edu/svn/newrepos.

The Initial Import

To get you unversioned files into the svn repository, use svn import. For example: <geshi> > svn import mydir https://csdms.colorado.edu/svn/newrepos -m "Inital import" Adding newrepos/file1.f Adding newrepos/file2.f

Committed revision 1. </geshi>

This copied the contents of the directory mydir into newrepos. <geshi> > svn list https://csdms.colorado.edu/svn/newrepos file1.f file2.f </geshi> You can now use svn checkout to get a working copy of your files.

Repository Layout

Users are free to use whatever repository layout they wish however there we recommend that you store the main development line of your code in a trunk directory, branches in a branches directory, and tags in a tags directory. Thus: <geshi lang=bash> > svn list https://csdms.colorado.edu/svn/newrepos branches/ tags/ trunk/

> svn list https://csdms.colorado.edu/svn/newrepos/trunk file1.f file2.f </geshi>

Software

  1. Hutton, E.W.H., Syvitski, J.P.M., 2004. Sedflux3D.
  2. Hutton, E.W.H., 2003. Isostasy2D.
  3. Hutton, E.W.H., Storms, J.E.A., 2003. Squall: an adaptation of BARSIM.
  4. Hutton, E.W.H., Syvitski, J.P.M., 2004. A revised version of Squall.
  5. Hutton, E.W.H., 2003. Erosion1D.

Publications

Refereed Journal Articles or Chapters
In Press
  1. Kettner, A.J., Gomez, B., Hutton, E.W.H., and Syvitski, J.P.M., (in press). Late Holocene Dispersal and Accumulation of Terrigenous Sediment on Poverty Shelf, New Zealand. Basin Research.
2008
  1. Hutton, E.W.H., & Syvitski, J.P.M. (2008). Sedflux-2.0: An advanced process-response model that generates three-dimensional stratigraphy. Computers and Geosciences, v.34 (10), pp., 1319-1337.
  2. Jouet, G., Hutton, E.W.H., Syvitski, J.P.M., & Berne, S. (2008). Response of the Rhone Deltaic Margin to Loading and Subsidence During the Last Climatic Cycle. Computer and Geosciences, v. 34, (10) pp. 1338-1357.
2007
  1. Syvitski, J.P.M., Pratson, L.F., Wiberg, P.L., Steckler, M.S., Garcia, M.H., Geyer, W.R., Harris, C.K., Hutton, E.W.H., Imran, J., Lee, H.J., Morehead, M.D., and Parker, G., 2007. Prediction of margin stratigraphy. In: C.A. Nittrouer, J.A. Austin, M.E. Field, J.H. Kravitz, J.P.M. Syvitski, and P.L. Wiberg (Eds.) Continental-Margin Sedimentation: From Sediment Transport to Sequence Stratigraphy. IAS Spec. Publ. No. 37: 459-530.
  2. Pratson, L.F., E.W.H. Hutton, A.J. Kettner, J.P.M. Syvitski, P.S. Hill, Douglas A.G., T.G. Milligan, 2007, The Impact of floods and storms on the acoustic reflectivity of the inner continental shelf: A modeling assessment. Continental Shelf Research. 27: 542–559.
2006
  1. Kubo, Y., Syvitski, J.P.M., Hutton, E.W.H., Kettner, A.J. 2006, Inverse modeling of post Last Glacial Maximum transgressive sedimentation using 2D-SedFlux: Application to the northern Adriatic Sea. Marine Geology 234: 233-243.
2005
  1. Kubo, Y., Syvitski, J.P.M., Hutton, E.W.H., and Paola, C., 2005. Advance and application of the stratigraphic simulation model 2D-SedFlux: From tank experiment to geological scale simulation. Sedimentary Geology, v. 178, pp. 187-195.
  2. Overeem, I., Syvitski, J.P.M., and Hutton, E.W.H., 2005, Three-dimensional numerical modeling of deltas. In: L. Giosan and J.P. Bhattacharya (Eds.) River Deltas — Concepts, Models, and Examples. SEPM Special Publication No. 83, pp. 13-30.
  3. Overeem, I., Syvitski, J.P.M., Hutton, E.W.H., and Kettner, A.J. 2005. Stratigraphic variability due to uncertainty in model boundary conditions: a case-study of the New Jersey Shelf over the last 21,000 years. Marine Geology 224: 23-41.
2004
  1. Hutton, E.W.H., and Syvitski, J.P.M., 2004. Advances in the Numerical Modeling of Sediment Failure During the Development of a Continental Margin. Marine Geology. 203: 367-380.
  2. Pratson, L., Swenson, J., Kettner, A., Fedele, J., Postma, G., Niedoroda, A., Friedrichs, C., Syvitski, J., Paola, C., Steckler, M., Hutton, E., Reed, C., Van Dijk, M., and Das, H. (2004). Modeling Continental Shelf Formation in the Adriatic Sea and Elsewhere. Oceanography. Vol 17, No. 4, pp. 118-131.
2003
  1. Syvitski, J.P.M. and Hutton E.W.H., 2003. Failure of marine deposits and their redistribution by sediment gravity flows. Pure and Applied Geophysics. Vol. 160, No. 10-11, pp. 2053-2069.
  2. Morehead, M.D., Syvitski, J.P.M., Hutton, E.W.H., and Peckham, S.D., 2003. Modeling the inter-annual and intra-annual variability in the flux of sediment in ungauged river basins. Global and Planetary Change.
2002
  1. Lee, H.J., Syvitski, J.P.M., Parker, G., Orange, D., Locat, J., Hutton, E.W.H., et al. (2002). Distinguishing sediment waves from slope failure deposits: field examples, including the'Humboldt slide', and modelling results. Marine Geology, 192(1), 79-104.
2001
  1. Morehead, M.D., Syvitski, J.P., & Hutton, E.W.H. (2001). The link between abrupt climate change and basin stratigraphy: a numerical approach. Global and Planetary Change, 28(1), 107-127.
  2. Syvitski, J.P.M., & Hutton, E.W.H. (2001). 2D SEDFLUX 1.0 C:-an advanced process-response numerical model for the fill of marine sedimentary basins. Computers and Geosciences, 27(6), 731-753.
  3. Bahr, D.B., Hutton, E.W.H., Syvitski, J.P.M., & Pratson, L.F. (2001). Exponential approximations to compacted sediment porosity profiles. Computers and Geosciences, 27(6), 691-700.
  4. Pratson, L.F., Imran, J., Hutton, E.W.H., Parker, G., & Syvitski, J.P.M. (2001). BANG1D:-a one-dimensional, Lagrangian model of subaqueous turbid surges. Computers and Geosciences, 27(6), 701-716.
1997
  1. Syvitski, J.P.M., & Hutton, E.W.H. (1997). FLOC: image analysis of marine suspended particles. Computers and Geosciences, 23(9), 967-974.
1996
  1. Syvitski, J.P.M., & Hutton, E.W.H. (1996). In situ characteristics of suspended particles as determined by the floc camera assembly FCA. Journal of Sea Research, 36(1), 131-142.
Papers Published in Non-Refereed Conference Proceedings
  1. Hutton, E.W.H., Pratson, L., Syvitski, J.P.M., Storms, J., 2003. Modeling the stratigraphic development of the inner shelf environment. ComDelta: Comparing Mediterranean and Black Sea Prodeltas. Aix-en-Provence, CEREGE, October 26-28, 2003, Abstract Book, p.46-47.
  2. Hutton, E.W.H., Pratson, L., Syvitski, J.P.M., Storms, J., 2003. Numerical Experiments to Investigate how Processes Form Strata. EOS Transactions, AGU, 84 (46), Fall Meeting Suppl., Abstract, p. F842.
  3. Pratson, L., Hutton, E.W.H., Syvitski, J.P.M., Kettner, A.J., 2003. Modeling the Impact of Flood Sedimentation on the Acoustic Response of the Seabed. EOS Transactions, AGU, 84(46), Fall Meeting Suppl., Abstract, p. F854.
  4. Hutton, E.W.H., Syvitski, J.P.M., and Kubo, Y., 2005. The Numerical Modeling of River Deltas. International Conference on Deltas: Geological Modeling and Management. January 10-16, 2005, Ho Chi Minh City, p. 31.
  5. Hutton, E.W.H., Syvitski, J.P.M., and Kubo, Y., 2005. The Numerical Modeling of River Deltas. In: Chen, Z., Saito, Y., and Goodbred, S., (Eds.) 2005. Mega-deltas of Asia-Geological Evolution and Human Impact. APN conference proceedings, China Ocean Press, Bejing, pp. 255-261.
Abstracts
  1. Hutton, E.W.H., and Syvitski, J.P.M., 2005, The impact of alongshore transport sources in modeling nearshore sediment dynamics: Application to Adriatic and Gulf of Lions type environments. Joint EuroSTRATAFORM/PROMESS 1 Conference, Salamanca, Oct. 24-27, Programme & Abstracts pg. 54.
  2. Kubo, Y., Syvitski, J.P.M., Hutton, E.W.H. and Kettner, A.J., 2005, Modeling of evolution of transgressive sediments on the northern Adriatic Sea after the Last Glacial Maximum. Joint EuroSTRATAFORM/PROMESS 1 Conference, Salamanca, Oct. 24-27, Programme & Abstracts pg. 88.
  3. Syvitski, J.P.M., Hutton, E.W.H., and Vörösmarty, C.J., 2005, The Mississippi Delta in the light of hurricane Katrina. EOS Transactions, AGU, 86(52), Abstract H42C-02
  4. Syvitski, J.P.M., Hutton, E.W.H., Kubo, Y., and Overeem, I., 2006, Integrating Field Data into Numerical Surface Dynamic Predictions.
  5. Overeem, I., Storms, J., Hutton, E.W.H., 2004. High-Magnitude Low-Frequency Events in Stratigraphic Models. IGC Meeting, Florence, Italy. 20-27 Aug, 2004.
  6. Kubo, Y., and Hutton, E.W.H., 2004. Predicting the Stratigraphic Architecture of the Northern Adriatic. EuroStratiform Meeting, Keystone, Colorado. 10-14 July, 2004.
  7. Kettner, A., and Hutton, E.W.H., 2004. Rhone River Simulation: discharge and sediment load predictions of the last 100 years. EuroStrataform Meeting, Keystone, Colorado. 10-14 July, 2004.
  8. Kettner, A.J., Hutton, E.W.H., and Syvitski, J.P.M., 2004. Simulating the impact of sediment flux on the 2003 flood event of the Rhone River on the Golf of Lions, France. AGU Fall Meeting 2004, San Francisco.
Papers Presented at Professional Conferences But Not Published
  1. Hutton, E.W.H., and Syvitski, J.P.M., 2003. SedFlux2D: Experimental Stratigraphy. XES Consortium Meeting, St. Anthony Falls Laboratory, U. Minnesota, Minneapolis: Aug. 20-22, 2003.
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