Importing TopoFlow packages:
   topoflow.utils
   topoflow.utils.tests
   topoflow.components
   topoflow.components.tests
   topoflow.framework
   topoflow.framework.tests
   topoflow.gui (unfinished)
 
 
Paths for this package:
framework_dir = /home/csdms/wmt/topoflow/opt/topoflow/topoflow/framework/
parent_dir    = /home/csdms/wmt/topoflow/opt/topoflow/topoflow/
examples_dir  = /home/csdms/wmt/topoflow/opt/topoflow/topoflow/examples/
__file__      = /home/csdms/wmt/topoflow/opt/topoflow/topoflow/framework/emeli.pyc
__name__      = topoflow.framework.emeli
 
 
Meteorology component: Initializing...
cfg_file = Meteorology.cfg
Process component: Reading grid info...
Computing pixel area grid...
############################################################
 ERROR: Could not find monitored pixel file:
 /home/mapi8461/.wmt/6d52c3a5-2e14-4b83-879d-889912c4f47b/Meteorology/case_outlets.txt
 Creating default version of file. 
############################################################
 
Calling open_input_files()...
Calling read_input_files()...
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/utils/model_input.py:120: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (data == None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1814: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (rho_H2O != None): self.rho_H2O = rho_H2O
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/utils/model_input.py:112: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (factor != 1) and (data != None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1819: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (P != None):
/home/csdms/wmt/topoflow/conda/lib/python2.7/site-packages/numpy/core/fromnumeric.py:2645: VisibleDeprecationWarning: `rank` is deprecated; use the `ndim` attribute or function instead. To find the rank of a matrix see `numpy.linalg.matrix_rank`.
  VisibleDeprecationWarning)
In read_input_files():
   min(P) = 5.00000005559  [mmph]
   max(P) = 5.00000005559  [mmph]
 
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1868: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (T_air != None): self.T_air = T_air
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1871: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (T_surf != None): self.T_surf = T_surf
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1874: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (RH != None): self.RH = RH
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1877: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (p0 != None): self.p0 = p0
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1880: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (uz != None): self.uz = uz
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1883: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (z != None): self.z = z
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1886: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (z0_air != None): self.z0_air = z0_air
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1895: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (albedo != None): self.albedo = albedo
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1898: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (em_surf != None): self.em_surf = em_surf
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1901: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (dust_atten != None): self.dust_atten = dust_atten
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1904: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (cloud_factor != None): self.cloud_factor = cloud_factor
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/met_base.py:1907: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (canopy_factor != None): self.canopy_factor = canopy_factor
Calling open_output_files()...
Imported netCDF4 version: 1.2.2
Calling update_outfile_names()...
Calling update_P_integral()...
Calling update_P_max()...
Calling update_P_rain()...
   >> Rain is falling...
Calling update_P_snow()...
Calling update_bulk_richardson_number()...
Calling update_bulk_aero_conductance()...
Callilng update_sensible_heat_flux()...
Calling update_saturation_vapor_pressure()...
Calling update_saturation_vapor_pressure()...
Calling update_vapor_pressure()...
Calling update_dew_point()...
Calling update_precipitable_water_content()...
Calling update_vapor_pressure()...
Calling update_latent_heat_flux()...
Calling update_conduction_heat_flux()...
Calling update_advection_heat_flux()...
Calling update_julian_day()...
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:740: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (hour_num != None):
Calling update_net_shortwave_radiation()...
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:369: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (gamma_dust == None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:430: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (gamma_dust == None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:411: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (gamma_dust == None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:468: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (gamma_dust == None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:445: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (gamma_dust == None):
/home/csdms/wmt/topoflow/opt/topoflow/topoflow/components/solar_funcs.py:396: FutureWarning: comparison to `None` will result in an elementwise object comparison in the future.
  if (gamma_dust == None):
Calling update_em_air()...
Calling update_net_longwave_radiation()...
Calling update_net_energy_flux()...
Calling write_output_files()...
/home/csdms/wmt/topoflow/opt/coupling/cmt/printers/nc/write.py:17: UserWarning: resetting "keep_open" to True
  warn('resetting "keep_open" to True', UserWarning)
Calling update_P_integral()...
Calling update_P_max()...
Calling update_P_rain()...
   >> Rain is falling...
Calling update_P_snow()...
Calling update_bulk_richardson_number()...
Calling update_bulk_aero_conductance()...
Callilng update_sensible_heat_flux()...
Calling update_saturation_vapor_pressure()...
Calling update_saturation_vapor_pressure()...
Calling update_vapor_pressure()...
Calling update_dew_point()...
Calling update_precipitable_water_content()...
Calling update_vapor_pressure()...
Calling update_latent_heat_flux()...
Calling update_conduction_heat_flux()...
Calling update_advection_heat_flux()...
Calling update_julian_day()...
Calling update_net_shortwave_radiation()...
Calling update_em_air()...
Calling update_net_longwave_radiation()...
Calling update_net_energy_flux()...
Calling read_input_files()...
In read_input_files():
   min(P) = 5.00000005559  [mmph]
   max(P) = 5.00000005559  [mmph]
 
Calling write_output_files()...
Calling update_P_integral()...
Calling update_P_max()...
Calling update_P_rain()...
   >> Rain is falling...
Calling update_P_snow()...
Calling update_bulk_richardson_number()...
Calling update_bulk_aero_conductance()...
Callilng update_sensible_heat_flux()...
Calling update_saturation_vapor_pressure()...
Calling update_saturation_vapor_pressure()...
Calling update_vapor_pressure()...
Calling update_dew_point()...
Calling update_precipitable_water_content()...
Calling update_vapor_pressure()...
Calling update_latent_heat_flux()...
Calling update_conduction_heat_flux()...
Calling update_advection_heat_flux()...
Calling update_julian_day()...
Calling update_net_shortwave_radiation()...
Calling update_em_air()...
Calling update_net_longwave_radiation()...
Calling update_net_energy_flux()...
Calling read_input_files()...
In read_input_files():
   min(P) = 5.00000005559  [mmph]
   max(P) = 5.00000005559  [mmph]
 
Calling write_output_files()...
Calling update_P_integral()...
Calling update_P_max()...
Calling update_P_rain()...
   >> Rain is falling...
Calling update_P_snow()...
Calling update_bulk_richardson_number()...
Calling update_bulk_aero_conductance()...
Callilng update_sensible_heat_flux()...
Calling update_saturation_vapor_pressure()...
Calling update_saturation_vapor_pressure()...
Calling update_vapor_pressure()...
Calling update_dew_point()...
Calling update_precipitable_water_content()...
Calling update_vapor_pressure()...
Calling update_latent_heat_flux()...
Calling update_conduction_heat_flux()...
Calling update_advection_heat_flux()...
Calling update_julian_day()...
Calling update_net_shortwave_radiation()...
Calling update_em_air()...
Calling update_net_longwave_radiation()...
Calling update_net_energy_flux()...
Calling read_input_files()...
In read_input_files():
   min(P) = 5.00000005559  [mmph]
   max(P) = 5.00000005559  [mmph]
 
Calling write_output_files()...
Calling update_P_integral()...
Calling update_P_max()...
Calling update_P_rain()...
   >> Rain is falling...
Calling update_P_snow()...
Calling update_bulk_richardson_number()...
Calling update_bulk_aero_conductance()...
Callilng update_sensible_heat_flux()...
Calling update_saturation_vapor_pressure()...
Calling update_saturation_vapor_pressure()...
Calling update_vapor_pressure()...
Calling update_dew_point()...
Calling update_precipitable_water_content()...
Calling update_vapor_pressure()...
Calling update_latent_heat_flux()...
Calling update_conduction_heat_flux()...
Calling update_advection_heat_flux()...
Calling update_julian_day()...
Calling update_net_shortwave_radiation()...
Calling update_em_air()...
Calling update_net_longwave_radiation()...
Calling update_net_energy_flux()...
Calling read_input_files()...
In read_input_files():
   min(P) = 5.00000005559  [mmph]
   max(P) = 5.00000005559  [mmph]
 
Calling write_output_files()...
Calling update_P_integral()...
Calling update_P_max()...
Calling update_P_rain()...
   >> Rain is falling...
Calling update_P_snow()...
Calling update_bulk_richardson_number()...
Calling update_bulk_aero_conductance()...
Callilng update_sensible_heat_flux()...
Calling update_saturation_vapor_pressure()...
Calling update_saturation_vapor_pressure()...
Calling update_vapor_pressure()...
Calling update_dew_point()...
Calling update_precipitable_water_content()...
Calling update_vapor_pressure()...
Calling update_latent_heat_flux()...
Calling update_conduction_heat_flux()...
Calling update_advection_heat_flux()...
Calling update_julian_day()...
Calling update_net_shortwave_radiation()...
Calling update_em_air()...
Calling update_net_longwave_radiation()...
Calling update_net_energy_flux()...
Calling read_input_files()...
In read_input_files():
   min(P) = 5.00000005559  [mmph]
   max(P) = 5.00000005559  [mmph]
 
Calling write_output_files()...
Calling close_input_files()...
Meteorology component: Finished.
