diff -crBN src/CMakeLists.txt taudem-5.0/CMakeLists.txt
*** src/CMakeLists.txt	1969-12-31 17:00:00.000000000 -0700
--- taudem-5.0/CMakeLists.txt	2010-07-19 14:19:34.000000000 -0600
***************
*** 0 ****
--- 1,119 ----
+ cmake_minimum_required(VERSION 2.6)
+ 
+ #set (CMAKE_CXX_COMPILER mpicxx)
+ set (BUILD_SHARED_LIBS OFF)
+ 
+ #SHAPEFILES includes all files in the shapefile library
+ #These should be compiled using the makefile in the shape directory
+ set (shape_srcs
+      shape/cell.cpp
+      shape/dbf.cpp
+      shape/exception.cpp
+      shape/field.cpp
+      shape/item.cpp
+      shape/point.cpp
+      shape/record.cpp
+      shape/shape.cpp
+      shape/shapefile.cpp
+      shape/shapemain.cpp
+      shape/shp_point.cpp
+      shape/shp_polygon.cpp
+      shape/shp_polyline.cpp
+      shape/ReadOutlets.cpp)
+ 
+ #OBJFILES includes classes, structures, and constants common to all files
+ set (common_srcs commonLib.cpp tiffIO.cpp)
+ 
+ set (D8FILES aread8mn.cpp aread8.cpp ${common_srcs} ${shape_srcs})
+ set (DINFFILES areadinfmn.cpp areadinf.cpp ${common_srcs} ${shape_srcs})
+ set (D8 D8FlowDirmn.cpp d8.cpp Node.cpp ${common_srcs} ${shape_srcs})
+ set (D8EXTREAMUP D8flowpathextremeup.cpp D8FlowPathExtremeUpmn.cpp
+      ${common_srcs} ${shape_srcs})
+ set (D8HDIST D8HDistToStrm.cpp D8HDistToStrmmn.cpp ${common_srcs})
+ set (DINFAVA DinfAvalanche.cpp DinfAvalanchemn.cpp ${common_srcs})
+ set (DINFCONCLIM DinfConcLimAccum.cpp DinfConcLimAccummn.cpp
+      ${common_srcs} ${shape_srcs})
+ set (DINFDECAY dinfdecayaccum.cpp DinfDecayAccummn.cpp
+      ${common_srcs} ${shape_srcs})
+ set (DINFDISTDOWN DinfDistDown.cpp DinfDistDownmn.cpp ${common_srcs})
+ set (DINFDISTUP DinfDistUp.cpp DinfDistUpmn.cpp ${common_srcs})
+ set (DINF DinfFlowDirmn.cpp dinf.cpp Node.cpp
+      ${common_srcs} ${shape_srcs})
+ set (DINFREVACCUM DinfRevAccum.cpp DinfRevAccummn.cpp ${common_srcs})
+ set (DINFTRANSLIMACCUM DinfTransLimAccum.cpp DinfTransLimAccummn.cpp
+      ${common_srcs} ${shape_srcs})
+ set (DINFUPDEPEND DinfUpDependence.cpp DinfUpDependencemn.cpp ${common_srcs})
+ set (DROPANALYSISFILES DropAnalysis.cpp DropAnalysismn.cpp
+      ${common_srcs} ${shape_srcs})
+ set (GRIDNET gridnetmn.cpp gridnet.cpp
+      ${common_srcs} ${shape_srcs})
+ set (LENGTHAREA LengthArea.cpp LengthAreamn.cpp ${common_srcs})
+ set (MVOUTLETSTOSTRMFILES MoveOutletsToStrm.cpp MoveOutletsToStrmmn.cpp
+      ${common_srcs} ${shape_srcs})
+ set (PEUKERDOUGLAS PeukerDouglas.cpp PeukerDouglasmn.cpp ${common_srcs})
+ set (PITREMOVE flood.cpp PitRemovemn.cpp ${common_srcs})
+ set (SLOPEAREA SlopeArea.cpp SlopeAreamn.cpp ${common_srcs})
+ set (SLOPEAREARATIO SlopeAreaRatio.cpp SlopeAreaRatiomn.cpp ${common_srcs})
+ set (SLOPEAVEDOWN SlopeAveDown.cpp SlopeAveDownmn.cpp ${common_srcs})
+ set (STREAMNET streamnetmn.cpp streamnet.cpp
+      ${common_srcs} ${shape_srcs})
+ set (THRESHOLD Threshold.cpp Thresholdmn.cpp ${common_srcs})
+ #set (READTIFFILES ReadTif.cpp ReadTifmn.cpp ${common_srcs})
+ 
+ 
+ add_executable (aread8 ${D8FILES})
+ add_executable (areadinf ${DINFFILES})
+ add_executable (d8flowdir ${D8})
+ add_executable (d8flowpathextremeup ${D8EXTREAMUP})
+ add_executable (d8hdisttostrm ${D8HDIST})
+ add_executable (dinfavalanche ${DINFAVA})
+ add_executable (dinfconclimaccum ${DINFCONCLIM})
+ add_executable (dinfdecayaccum ${DINFDECAY})
+ add_executable (dinfdistdown ${DINFDISTDOWN})
+ add_executable (dinfdistup ${DINFDISTUP})
+ add_executable (dinfflowdir ${DINF})
+ add_executable (dinfrevaccum ${DINFREVACCUM})
+ add_executable (dinftranslimaccum ${DINFTRANSLIMACCUM})
+ add_executable (dinfupdependence ${DINFUPDEPEND})
+ add_executable (dropanalysis ${DROPANALYSISFILES})
+ add_executable (gridnet ${GRIDNET})
+ add_executable (lengtharea ${LENGTHAREA})
+ add_executable (moveoutletstostrm ${MVOUTLETSTOSTRMFILES})
+ add_executable (peukerdouglas ${PEUKERDOUGLAS})
+ add_executable (pitremove ${PITREMOVE})
+ add_executable (slopearea ${SLOPEAREA})
+ add_executable (slopearearatio ${SLOPEAREARATIO})
+ add_executable (slopeavedown ${SLOPEAVEDOWN})
+ add_executable (streamnet ${STREAMNET})
+ add_executable (threshold ${THRESHOLD})
+ #add_executable (ReadTif ${READTIFFILES})
+ #add_executable (compare ${OBJFILES} compare.cpp)
+ #add_executable (extract ${OBJFILES} extract.cpp)
+ 
+ install(TARGETS aread8 
+                 areadinf
+                 d8flowdir
+                 d8flowpathextremeup
+                 d8hdisttostrm
+                 dinfavalanche
+                 dinfconclimaccum
+                 dinfdecayaccum
+                 dinfdistdown
+                 dinfdistup
+                 dinfflowdir
+                 dinfrevaccum
+                 dinftranslimaccum
+                 dinfupdependence
+                 dropanalysis
+                 gridnet
+                 lengtharea
+                 moveoutletstostrm
+                 peukerdouglas
+                 pitremove
+                 slopearea
+                 slopearearatio
+                 slopeavedown
+                 streamnet
+                 threshold
+         DESTINATION bin)
+ 
diff -crBN src/linearpart.h taudem-5.0/linearpart.h
*** src/linearpart.h	2010-06-23 16:30:40.000000000 -0600
--- taudem-5.0/linearpart.h	2010-07-19 14:17:32.000000000 -0600
***************
*** 44,49 ****
--- 44,50 ----
  #include <queue>
  #include <stdio.h>
  #include <stdlib.h>
+ #include <string.h>
  #include <math.h>
  #ifndef LINEARPART_H
  #define LINEARPART_H
diff -crBN src/makefile taudem-5.0/makefile
*** src/makefile	2010-06-30 16:45:42.000000000 -0600
--- taudem-5.0/makefile	2010-07-19 14:09:24.000000000 -0600
***************
*** 76,82 ****
  READTIFFILES = ReadTif.o ReadTifmn.o $(OBJFILES) 
  
  #The following are compiler flags common to all building rules
! CC = mpiCC
  CFLAGS=-O2
  CFLAGS=-g -Wall
  CFLAGS=-g
--- 76,82 ----
  READTIFFILES = ReadTif.o ReadTifmn.o $(OBJFILES) 
  
  #The following are compiler flags common to all building rules
! CC = mpicxx
  CFLAGS=-O2
  CFLAGS=-g -Wall
  CFLAGS=-g
Binary files src/shape/cell.o and taudem-5.0/shape/cell.o differ
Binary files src/shape/dbf.o and taudem-5.0/shape/dbf.o differ
Binary files src/shape/exception.o and taudem-5.0/shape/exception.o differ
Binary files src/shape/field.o and taudem-5.0/shape/field.o differ
Binary files src/shape/item.o and taudem-5.0/shape/item.o differ
diff -crBN src/shape/makefile taudem-5.0/shape/makefile
*** src/shape/makefile	2010-07-01 08:43:24.000000000 -0600
--- taudem-5.0/shape/makefile	2010-07-19 14:10:20.000000000 -0600
***************
*** 1,4 ****
! CC = mpiCC
  CFLAGS=-O2
  
  all : cell.o dbf.o exception.o field.o item.o point.o record.o shape.o shapefile.o shapemain.o shp_point.o shp_polygon.o shp_polyline.o ReadOutlets.o
--- 1,4 ----
! CC = mpicxx
  CFLAGS=-O2
  
  all : cell.o dbf.o exception.o field.o item.o point.o record.o shape.o shapefile.o shapemain.o shp_point.o shp_polygon.o shp_polyline.o ReadOutlets.o
Binary files src/shape/point.o and taudem-5.0/shape/point.o differ
Binary files src/shape/ReadOutlets.o and taudem-5.0/shape/ReadOutlets.o differ
Binary files src/shape/record.o and taudem-5.0/shape/record.o differ
Binary files src/shape/shapefile.o and taudem-5.0/shape/shapefile.o differ
Binary files src/shape/shapemain.o and taudem-5.0/shape/shapemain.o differ
Binary files src/shape/shape.o and taudem-5.0/shape/shape.o differ
Binary files src/shape/shp_point.o and taudem-5.0/shape/shp_point.o differ
Binary files src/shape/shp_polygon.o and taudem-5.0/shape/shp_polygon.o differ
Binary files src/shape/shp_polyline.o and taudem-5.0/shape/shp_polyline.o differ
diff -crBN src/tiffIO.cpp taudem-5.0/tiffIO.cpp
*** src/tiffIO.cpp	2010-06-26 06:47:50.000000000 -0600
--- taudem-5.0/tiffIO.cpp	2010-07-19 14:16:20.000000000 -0600
***************
*** 40,45 ****
--- 40,46 ----
  
  #include <mpi.h>
  #include <stdio.h>
+ #include <string.h>
  #include <stdint.h>  // See http://en.wikipedia.org/wiki/Stdint.h for details.
  #include <memory>
  #include "tiffIO.h"