This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by netCDF configure 4.1.2, which was
generated by GNU Autoconf 2.68.  Invocation command line was

  $ ./configure --prefix=/home/beach/guest/dafu8991/MYCODE

## --------- ##
## Platform. ##
## --------- ##

hostname = beach
uname -m = x86_64
uname -r = 2.6.18-92.el5
uname -s = Linux
uname -v = #1 SMP Tue Apr 29 13:16:15 EDT 2008

/usr/bin/uname -p = unknown
/bin/uname -X     = unknown

/bin/arch              = x86_64
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /usr/local/matlab-2008b/bin
PATH: /usr/local/maui/bin
PATH: /opt/torque/bin
PATH: /home/csdms/tools/pbstools/0.1/sbin
PATH: /home/csdms/tools/pbstools/0.1/bin
PATH: /home/csdms/tools/pbstools/internal/bin
PATH: /usr/local/hdf5/bin
PATH: /usr/local/netcdf/bin
PATH: /usr/local/mvapich2/bin
PATH: /usr/local/modules-3.2.6/Modules/3.2.6/bin
PATH: /home/beach/guest/dafu8991/bin
PATH: /usr/local/ssh/bin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /usr/sbin
PATH: /usr/local/etc
PATH: /usr/lib64
PATH: /usr/local/gnu/bin
PATH: /usr/local/X11/bin
PATH: /usr/local/perl/bin
PATH: /usr/local/python/bin
PATH: /usr/local/TeX/bin
PATH: /usr/local/tcl-tk/bin
PATH: /usr/local/lang/bin
PATH: /usr/local/emacs/bin
PATH: /bin
PATH: /usr/openwin/bin
PATH: /usr/ccs/bin
PATH: /usr/ucb
PATH: /usr/local/subversion/bin
PATH: /usr/local/python/bin
PATH: /usr/X11R6/bin
PATH: /home/beach/guest/bevera/MYCODE/NCO/nco-4.0.0/bin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:3149: netCDF 4.1.2
configure:3189: checking build system type
configure:3203: result: x86_64-unknown-linux-gnu
configure:3223: checking host system type
configure:3236: result: x86_64-unknown-linux-gnu
configure:3258: checking target system type
configure:3271: result: x86_64-unknown-linux-gnu
configure:3322: checking for a BSD-compatible install
configure:3390: result: /usr/bin/install -c
configure:3401: checking whether build environment is sane
configure:3451: result: yes
configure:3592: checking for a thread-safe mkdir -p
configure:3631: result: /bin/mkdir -p
configure:3644: checking for gawk
configure:3660: found /usr/bin/gawk
configure:3671: result: gawk
configure:3682: checking whether make sets $(MAKE)
configure:3704: result: yes
configure:3788: checking user options
configure:3798: checking whether CXX is set to ''
configure:3802: result: no
configure:3806: checking whether FC is set to ''
configure:3810: result: no
configure:3814: checking whether F90 is set to ''
configure:3818: result: no
configure:3822: checking whether a NCIO_MINBLOCKSIZE was specified
configure:3832: result: 256
configure:3840: checking whether udunits is to be built
configure:3849: result: no
configure:3852: checking if fsync support is enabled
configure:3860: result: yes
configure:3869: checking whether extra valgrind tests should be run
configure:3877: result: no
configure:3900: checking whether libcf is to be built
configure:3909: result: no
configure:3921: checking whether a location for the HDF4 library was specified
configure:3929: result: 
configure:3935: checking whether reading of HDF4 SD files is to be enabled
configure:3937: result: no
configure:3941: checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget)
configure:3954: result: no
configure:3958: checking whether parallel I/O for classic and 64-bit offset files using parallel-netcdf is to be enabled
configure:3966: result: no
configure:3970: checking whether a location for the parallel-netcdf library was specified
configure:3979: result: no
configure:3990: checking whether new netCDF-4 C++ API is to be built
configure:4001: result: no
configure:4008: checking whether extra example tests should be run
configure:4016: result: no
configure:4020: checking whether parallel IO tests should be run
configure:4028: result: no
configure:4032: checking whether a location for the HDF5 library was specified
configure:4040: result: 
configure:4046: checking whether a location for the ZLIB library was specified
configure:4054: result: 
configure:4060: checking whether a location for the SZLIB library was specified
configure:4068: result: 
configure:4074: checking whether a default chunk size in bytes was specified
configure:4084: result: 4194304
configure:4093: checking whether a maximum per-variable cache size for HDF5 was specified
configure:4103: result: 67108864
configure:4112: checking whether a number of chunks for the default per-variable cache was specified
configure:4122: result: 10
configure:4131: checking whether a default file cache size for HDF5 was specified
configure:4141: result: 4194304
configure:4150: checking whether a default file cache maximum number of elements for HDF5 was specified
configure:4160: result: 1009
configure:4169: checking whether a default cache preemption for HDF5 was specified
configure:4179: result: 0.75
configure:4188: checking whether netCDF-4 logging is enabled
configure:4196: result: no
configure:4200: checking whether cdmremote client is to be built
configure:4210: result: no
configure:4227: checking whether DAP client is to be built
configure:4235: result: yes
configure:4254: checking whether a path for curl-config was specified
configure:4257: result: no
configure:4265: checking whether a location for curl installation was specified
configure:4274: result: no
configure:4330: checking checking whether a location for curl-config found
configure:4336: result: curl-config
configure:4383: checking whether dap remote testing should be enabled (default on)
configure:4394: result: yes
configure:4419: checking whether the time-consuming dap tests should be enabled (default off)
configure:4430: result: no
configure:4443: checking whether netCDF extra tests should be run (developers only)
configure:4451: result: no
configure:4468: checking whether Fortran compiler(s) should be tested during configure
configure:4476: result: yes
configure:4480: checking whether FFIO will be used
configure:4488: result: no
configure:4504: checking whether to skip C++, F77, or F90 APIs if compiler is broken
configure:4512: result: yes
configure:4516: checking whether only the C library is desired
configure:4524: result: no
configure:4543: checking whether examples should be built
configure:4551: result: yes
configure:4563: checking whether F77 API is desired
configure:4572: result: yes
configure:4577: checking whether any Fortran API is desired
configure:4585: result: yes
configure:4590: checking whether F90 API is desired
configure:4600: result: yes
configure:4604: checking whether fortran type sizes should be checked
configure:4612: result: yes
configure:4618: checking whether C API is desired
configure:4626: result: yes
configure:4633: checking where to get netCDF C-only library for separate fortran libraries
configure:4649: result: 
configure:4661: checking whether CXX API is desired
configure:4670: result: yes
configure:4679: checking whether v2 netCDF API should be built
configure:4687: result: yes
configure:4706: checking whether the ncgen/ncdump/nccopy should be built
configure:4715: result: yes
configure:4727: checking whether large file (> 2GB) tests should be run
configure:4735: result: no
configure:4752: checking whether benchmaks should be run (experimental)
configure:4760: result: no
configure:4772: checking whether extreme numbers should be used in tests
configure:4787: result: yes
configure:4799: checking where to put large temp files if large file tests are run
configure:4808: result: .
configure:4819: checking whether a win32 DLL is desired
configure:4827: result: no
configure:4849: checking whether separate fortran libs are desired
configure:4857: result: yes
configure:4892: finding C compiler
configure:4949: checking for xlc
configure:4979: result: no
configure:4949: checking for cc
configure:4965: found /usr/bin/cc
configure:4976: result: cc
configure:5007: checking for C compiler version
configure:5016: cc --version >&5
cc (GCC) 4.1.2 20071124 (Red Hat 4.1.2-42)
Copyright (C) 2006 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:5027: $? = 0
configure:5016: cc -v >&5
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux
Thread model: posix
gcc version 4.1.2 20071124 (Red Hat 4.1.2-42)
configure:5027: $? = 0
configure:5016: cc -V >&5
cc: '-V' option must have argument
configure:5027: $? = 1
configure:5016: cc -qversion >&5
cc: unrecognized option '-qversion'
cc: no input files
configure:5027: $? = 1
configure:5047: checking whether the C compiler works
configure:5069: cc  /home/beach/guest/dafu8991/MYCODE/include /home/beach/guest/dafu8991/MYCODE/lib conftest.c  >&5
/home/beach/guest/dafu8991/MYCODE/include: file not recognized: Is a directory
collect2: ld returned 1 exit status
configure:5073: $? = 1
configure:5111: result: no
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.1.2"
| #define PACKAGE_STRING "netCDF 4.1.2"
| #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu"
| #define PACKAGE_URL ""
| #define PACKAGE "netcdf"
| #define VERSION "4.1.2"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_FSYNC 1
| #define DEFAULT_CHUNK_SIZE 4194304
| #define MAX_DEFAULT_CACHE_SIZE 67108864
| #define DEFAULT_CHUNKS_IN_CACHE 10
| #define CHUNK_CACHE_SIZE 4194304
| #define CHUNK_CACHE_NELEMS 1009
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define ENABLE_DAP 1
| #define ENABLE_DAP_REMOTE_TESTS 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| /* end confdefs.h.  */
| 
| int
| main ()
| {
| 
|   ;
|   return 0;
| }
configure:5116: error: in `/home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2':
configure:5118: error: C compiler cannot create executables
See `config.log' for more details

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value=/home/beach/guest/dafu8991/MYCODE/include
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value=/home/beach/guest/dafu8991/MYCODE/lib
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=x86_64-unknown-linux-gnu
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_ac_ct_CC=cc
ac_cv_prog_make_make_set=yes
ac_cv_target=x86_64-unknown-linux-gnu

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/missing --run aclocal-1.11'
ALLOCA=''
AMDEPBACKSLASH=''
AMDEP_FALSE=''
AMDEP_TRUE=''
AMTAR='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/missing --run tar'
AR=''
AS=''
AUTOCONF='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/missing --run autoconf'
AUTOHEADER='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/missing --run autoheader'
AUTOMAKE='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/missing --run automake-1.11'
AWK='gawk'
BINFILE_NAME=''
BUILD_BENCHMARKS_FALSE=''
BUILD_BENCHMARKS_TRUE='#'
BUILD_CDMREMOTE_FALSE=''
BUILD_CDMREMOTE_TRUE=''
BUILD_CXX4_FALSE=''
BUILD_CXX4_TRUE=''
BUILD_CXX_FALSE=''
BUILD_CXX_TRUE=''
BUILD_C_FALSE=''
BUILD_C_TRUE=''
BUILD_DAP_FALSE=''
BUILD_DAP_TRUE=''
BUILD_DLL_FALSE=''
BUILD_DLL_TRUE='#'
BUILD_EXAMPLES_FALSE='#'
BUILD_EXAMPLES_TRUE=''
BUILD_F77_FALSE=''
BUILD_F77_TRUE=''
BUILD_F90_FALSE=''
BUILD_F90_TRUE=''
BUILD_LIBCF_FALSE=''
BUILD_LIBCF_TRUE=''
BUILD_PARALLEL_FALSE=''
BUILD_PARALLEL_TRUE=''
BUILD_SEPARATE_FORTRAN_FALSE='#'
BUILD_SEPARATE_FORTRAN_TRUE=''
BUILD_UDUNITS_FALSE=''
BUILD_UDUNITS_TRUE=''
BUILD_UTILITIES_FALSE='#'
BUILD_UTILITIES_TRUE=''
BUILD_V2_FALSE='#'
BUILD_V2_TRUE=''
CC='cc'
CCDEPMODE=''
CFLAGS=''
CPP=''
CPPFLAGS='/home/beach/guest/dafu8991/MYCODE/include'
CROSS_COMPILING_FALSE=''
CROSS_COMPILING_TRUE=''
CURLDIR='/usr'
CURL_CFLAGS=''
CURL_FCFLAGS=''
CURL_FFLAGS=''
CURL_LIBS='-L/usr/kerberos/lib64 -lcurl -lgssapi_krb5 -lkrb5 -lk5crypto -lcom_err -lresolv -ldl -lidn -lssl -lcrypto -lz  '
CXX=''
CXXCPP=''
CXXDEPMODE=''
CXXFLAGS=''
CYGPATH_W='echo'
DEFS=''
DEPDIR=''
DLLTOOL=''
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP=''
ENABLE_DAP_LONG_TESTS_FALSE=''
ENABLE_DAP_LONG_TESTS_TRUE=''
ENABLE_DAP_REMOTE_TESTS_FALSE=''
ENABLE_DAP_REMOTE_TESTS_TRUE=''
EXEEXT=''
EXTERN_CFLAGS=''
EXTERN_CPPFLAGS=''
EXTERN_LDFLAGS=''
EXTRA_EXAMPLE_TESTS_FALSE=''
EXTRA_EXAMPLE_TESTS_TRUE=''
EXTRA_TESTS_FALSE=''
EXTRA_TESTS_TRUE='#'
F77=''
FC=''
FCFLAGS=''
FCFLAGS_f90=''
FFLAGS=''
FGREP=''
FTPBINDIR=''
GREP=''
HAS_CXX=''
HAS_DAP=''
HAS_F77=''
HAS_F90=''
HAS_HDF4=''
HAS_HDF5=''
HAS_NC2=''
HAS_NC4=''
HAS_PNETCDF=''
HAS_SZLIB=''
HDF4DIR=''
HDF5DIR=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
INTERNAL_OCLIB_FALSE='#'
INTERNAL_OCLIB_TRUE=''
LARGE_FILE_TESTS_FALSE=''
LARGE_FILE_TESTS_TRUE='#'
LD=''
LDFLAGS='/home/beach/guest/dafu8991/MYCODE/lib'
LIBOBJS=''
LIBS=''
LIBTOOL=''
LIPO=''
LN_S=''
LTLIBOBJS=''
MAKEINFO='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/missing --run makeinfo'
MAKEWHATIS_CMD=''
MANIFEST_TOOL=''
MKDIR_P='/bin/mkdir -p'
MOD_FLAG=''
NC_FLIBS=''
NC_LIBS=''
NETCDF_C_LIB=''
NM=''
NMEDIT=''
NMFLAGS=''
OBJDUMP=''
OBJEXT=''
OTOOL64=''
OTOOL=''
PACKAGE='netcdf'
PACKAGE_BUGREPORT='support-netcdf@unidata.ucar.edu'
PACKAGE_NAME='netCDF'
PACKAGE_STRING='netCDF 4.1.2'
PACKAGE_TARNAME='netcdf'
PACKAGE_URL=''
PACKAGE_VERSION='4.1.2'
PATH_SEPARATOR=':'
PNETCDFDIR=''
RANLIB=''
SED=''
SET_MAKE=''
SHELL='/bin/sh'
STRIP=''
SZLIBDIR=''
TEST_F77_FALSE=''
TEST_F77_TRUE=''
TEST_PARALLEL_FALSE=''
TEST_PARALLEL_TRUE=''
UPPER_CASE_MOD_FALSE=''
UPPER_CASE_MOD_TRUE=''
USE_DAP_FALSE=''
USE_DAP_TRUE=''
USE_DISPATCH_FALSE=''
USE_DISPATCH_TRUE=''
USE_FFIO_FALSE=''
USE_FFIO_TRUE='#'
USE_HDF4_DIR_FALSE=''
USE_HDF4_DIR_TRUE=''
USE_HDF4_FALSE=''
USE_HDF4_FILE_TESTS_FALSE=''
USE_HDF4_FILE_TESTS_TRUE=''
USE_HDF4_TRUE=''
USE_HDF5_DIR_FALSE=''
USE_HDF5_DIR_TRUE=''
USE_LOGGING_FALSE=''
USE_LOGGING_TRUE=''
USE_NETCDF4_FALSE=''
USE_NETCDF4_TRUE=''
USE_NETCDF_C_LIB_DIR_FALSE=''
USE_NETCDF_C_LIB_DIR_TRUE='#'
USE_PNETCDF_DIR_FALSE=''
USE_PNETCDF_DIR_TRUE=''
USE_PNETCDF_FALSE=''
USE_PNETCDF_TRUE=''
USE_RENAMEV3_FALSE=''
USE_RENAMEV3_TRUE=''
USE_SZIP_FALSE=''
USE_SZIP_TRUE=''
USE_SZLIB_DIR_FALSE=''
USE_SZLIB_DIR_TRUE=''
USE_VALGRIND_TESTS_FALSE=''
USE_VALGRIND_TESTS_TRUE=''
USE_ZLIB_DIR_FALSE=''
USE_ZLIB_DIR_TRUE=''
VERSION='4.1.2'
WHATIS=''
ZLIBDIR=''
ac_ct_AR=''
ac_ct_CC='cc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_F77=''
ac_ct_FC=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE=''
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE=''
am__fastdepCXX_TRUE=''
am__include=''
am__isrc=''
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='x86_64-unknown-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='unknown'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-unknown-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='unknown'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /home/beach/guest/dafu8991/MYCODE/netcdf-4.1.2/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='/bin/mkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/home/beach/guest/dafu8991/MYCODE'
prog=''
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs=''
sysconfdir='${prefix}/etc'
target='x86_64-unknown-linux-gnu'
target_alias=''
target_cpu='x86_64'
target_os='linux-gnu'
target_vendor='unknown'

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "netCDF"
#define PACKAGE_TARNAME "netcdf"
#define PACKAGE_VERSION "4.1.2"
#define PACKAGE_STRING "netCDF 4.1.2"
#define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu"
#define PACKAGE_URL ""
#define PACKAGE "netcdf"
#define VERSION "4.1.2"
#define NCIO_MINBLOCKSIZE 256
#define USE_FSYNC 1
#define DEFAULT_CHUNK_SIZE 4194304
#define MAX_DEFAULT_CACHE_SIZE 67108864
#define DEFAULT_CHUNKS_IN_CACHE 10
#define CHUNK_CACHE_SIZE 4194304
#define CHUNK_CACHE_NELEMS 1009
#define CHUNK_CACHE_PREEMPTION 0.75
#define USE_DAP 1
#define ENABLE_DAP 1
#define ENABLE_DAP_REMOTE_TESTS 1
#define USE_EXTREME_NUMBERS 1
#define TEMP_LARGE "."

configure: exit 77